RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 RPL37P61927 97 aaKnown RBP11.81□□□□□ -0.52
KCNMA1-293ENST00000640969 OXTP01178 125 aa11.78□□□□□ -0.52
KCNMA1-293ENST00000640969 H1FX-AS1Q4G0G2 97 aa11.77□□□□□ -0.53
KCNMA1-293ENST00000640969 MAST4O15021 2626 aa11.76□□□□□ -0.53
KCNMA1-293ENST00000640969 SEC61BP60468 96 aaKnown RBP11.76□□□□□ -0.53
KCNMA1-293ENST00000640969 Q5VSD8 79 aa11.72□□□□□ -0.53
KCNMA1-293ENST00000640969 M0QZ58 72 aa11.72□□□□□ -0.53
KCNMA1-293ENST00000640969 ATRQ13535 2644 aa11.7□□□□□ -0.54
KCNMA1-293ENST00000640969 BPTFQ12830 3046 aa11.7□□□□□ -0.54
KCNMA1-293ENST00000640969 KRTAP10-1P60331 282 aa11.69□□□□□ -0.54
KCNMA1-293ENST00000640969 Q6ZR54 194 aa11.66□□□□□ -0.54
KCNMA1-293ENST00000640969 KRTAP10-2P60368 255 aa11.65□□□□□ -0.54
KCNMA1-293ENST00000640969 HELZ2Q9BYK8 2649 aaKnown RBP11.64□□□□□ -0.55
KCNMA1-293ENST00000640969 SPATA8Q6RVD6 105 aa11.63□□□□□ -0.55
KCNMA1-293ENST00000640969 ADM2Q7Z4H4 148 aa11.6□□□□□ -0.55
KCNMA1-293ENST00000640969 FLNAP21333 2647 aaKnown RBP11.59□□□□□ -0.55
KCNMA1-293ENST00000640969 KRTAP29-1A8MX34 341 aaPredicted RBP11.57□□□□□ -0.56
KCNMA1-293ENST00000640969 KRTAP4-16G5E9R7 235 aaPredicted RBP11.57□□□□□ -0.56
KCNMA1-293ENST00000640969 PANO1I0J062 215 aa11.54□□□□□ -0.56
KCNMA1-293ENST00000640969 DNAH12Q6ZR08 3092 aa11.51□□□□□ -0.57
KCNMA1-293ENST00000640969 LCE6AA0A183 80 aa11.51□□□□□ -0.57
KCNMA1-293ENST00000640969 ASB16-AS1Q495Z4 193 aa11.5□□□□□ -0.57
KCNMA1-293ENST00000640969 PLAC4Q8WY50 150 aa11.49□□□□□ -0.57
KCNMA1-293ENST00000640969 ITPR3Q14573 2671 aa11.49□□□□□ -0.57
KCNMA1-293ENST00000640969 CEP350Q5VT06 3117 aa11.47□□□□□ -0.57
KCNMA1-293ENST00000640969 CFAP46Q8IYW2 2715 aa11.46□□□□□ -0.58
KCNMA1-293ENST00000640969 CENPEQ02224 2701 aa11.45□□□□□ -0.58
KCNMA1-293ENST00000640969 A0A087X002 238 aa11.45□□□□□ -0.58
KCNMA1-293ENST00000640969 NOTCH2NLQ7Z3S9 236 aa11.42□□□□□ -0.58
KCNMA1-293ENST00000640969 CHD7Q9P2D1 2997 aa11.3□□□□□ -0.6
KCNMA1-293ENST00000640969 A8MU10 97 aa11.29□□□□□ -0.6
KCNMA1-293ENST00000640969 KRTAP25-1Q3LHN0 102 aa11.28□□□□□ -0.6
KCNMA1-293ENST00000640969 KRTAP11-1Q8IUC1 163 aa11.28□□□□□ -0.6
KCNMA1-293ENST00000640969 UTRNP46939 3433 aa11.27□□□□□ -0.6
KCNMA1-293ENST00000640969 A6NN06 94 aa11.26□□□□□ -0.61
KCNMA1-293ENST00000640969 STAB1Q9NY15 2570 aa11.26□□□□□ -0.61
KCNMA1-293ENST00000640969 SETXQ7Z333 2677 aaKnown RBP11.25□□□□□ -0.61
KCNMA1-293ENST00000640969 KRTAP16-1A8MUX0 517 aa11.22□□□□□ -0.61
KCNMA1-293ENST00000640969 TEP1Q99973 2627 aaKnown RBP11.2□□□□□ -0.62
KCNMA1-293ENST00000640969 RPS29P62273 56 aaKnown RBP11.19□□□□□ -0.62
KCNMA1-293ENST00000640969 A8MUU9 505 aa11.19□□□□□ -0.62
KCNMA1-293ENST00000640969 FLG2Q5D862 2391 aaPredicted RBP11.17□□□□□ -0.62
KCNMA1-293ENST00000640969 ZNF292O60281 2723 aa11.16□□□□□ -0.62
KCNMA1-293ENST00000640969 C20orf166-AS1Q96NR2 134 aa11.14□□□□□ -0.63
KCNMA1-293ENST00000640969 KRTAP7-1Q8IUC3 87 aa11.14□□□□□ -0.63
KCNMA1-293ENST00000640969 CHD9Q3L8U1 2897 aa11.13□□□□□ -0.63
KCNMA1-293ENST00000640969 NBEAL1Q6ZS30 2694 aa11.11□□□□□ -0.63
KCNMA1-293ENST00000640969 AKAP13Q12802 2813 aa11.11□□□□□ -0.63
KCNMA1-293ENST00000640969 Q6ZRN7 208 aaPredicted RBP11.11□□□□□ -0.63
KCNMA1-293ENST00000640969 C5orf42Q9H799 3197 aa11.1□□□□□ -0.63
KCNMA1-293ENST00000640969 RANBP2P49792 3224 aaKnown RBP11.1□□□□□ -0.63
KCNMA1-293ENST00000640969 KRTAP13-2Q52LG2 175 aa11.07□□□□□ -0.64
KCNMA1-293ENST00000640969 CHD6Q8TD26 2715 aa11.06□□□□□ -0.64
KCNMA1-293ENST00000640969 DMBT1Q9UGM3 2413 aaPredicted RBP11.05□□□□□ -0.64
KCNMA1-293ENST00000640969 COL6A5A8TX70 2615 aa11.05□□□□□ -0.64
KCNMA1-293ENST00000640969 TEX15Q9BXT5 2789 aa11.04□□□□□ -0.64
KCNMA1-293ENST00000640969 KRTAP13-1Q8IUC0 172 aa11.01□□□□□ -0.65
KCNMA1-293ENST00000640969 NDUFAF8A1L188 74 aa10.99□□□□□ -0.65
KCNMA1-293ENST00000640969 HTTP42858 3142 aa10.96□□□□□ -0.65
KCNMA1-293ENST00000640969 MGAQ8IWI9 3026 aa10.95□□□□□ -0.66
KCNMA1-293ENST00000640969 UNC79Q9P2D8 2635 aa10.94□□□□□ -0.66
KCNMA1-293ENST00000640969 GCN1Q92616 2671 aaKnown RBP10.92□□□□□ -0.66
KCNMA1-293ENST00000640969 PCNTO95613 3336 aa10.91□□□□□ -0.66
KCNMA1-293ENST00000640969 TRANK1O15050 2925 aa10.9□□□□□ -0.66
KCNMA1-293ENST00000640969 NOTCH1P46531 2555 aa10.89□□□□□ -0.67
KCNMA1-293ENST00000640969 TNP1P09430 55 aa10.86□□□□□ -0.67
KCNMA1-293ENST00000640969 C10orf95Q9H7T3 257 aa10.82□□□□□ -0.68
KCNMA1-293ENST00000640969 CFAP54Q96N23 3096 aa10.82□□□□□ -0.68
KCNMA1-293ENST00000640969 BAHCC1Q9P281 2608 aa10.82□□□□□ -0.68
KCNMA1-293ENST00000640969 DSPP15924 2871 aaKnown RBP10.79□□□□□ -0.68
KCNMA1-293ENST00000640969 IGSF10Q6WRI0 2623 aa10.78□□□□□ -0.68
KCNMA1-293ENST00000640969 LAMA3Q16787 3333 aa10.78□□□□□ -0.68
KCNMA1-293ENST00000640969 A0A0C4DFX4 3053 aa10.75□□□□□ -0.69
KCNMA1-293ENST00000640969 WDFY4Q6ZS81 3184 aa10.72□□□□□ -0.69
KCNMA1-293ENST00000640969 NBEAL2Q6ZNJ1 2754 aa10.71□□□□□ -0.7
KCNMA1-293ENST00000640969 UBR5O95071 2799 aaPredicted RBP10.71□□□□□ -0.7
KCNMA1-293ENST00000640969 MAP1AP78559 2803 aaPredicted RBP10.69□□□□□ -0.7
KCNMA1-293ENST00000640969 STAB2Q8WWQ8 2551 aa10.68□□□□□ -0.7
KCNMA1-293ENST00000640969 MKI67P46013 3256 aaKnown RBP10.65□□□□□ -0.7
KCNMA1-293ENST00000640969 TRIOO75962 3097 aa10.57□□□□□ -0.72
KCNMA1-293ENST00000640969 PRUNE2Q8WUY3 3088 aa10.56□□□□□ -0.72
KCNMA1-293ENST00000640969 PP632Q6XCG6 107 aa10.55□□□□□ -0.72
KCNMA1-293ENST00000640969 NSD1Q96L73 2696 aaPredicted RBP10.55□□□□□ -0.72
KCNMA1-293ENST00000640969 LAMA2P24043 3122 aaKnown RBP10.53□□□□□ -0.72
KCNMA1-293ENST00000640969 KRTAP10-8P60410 259 aa10.5□□□□□ -0.73
KCNMA1-293ENST00000640969 BRCA2P51587 3418 aa10.5□□□□□ -0.73
KCNMA1-293ENST00000640969 XP32Q5T750 250 aa10.49□□□□□ -0.73
KCNMA1-293ENST00000640969 A0A1B0GVY2 172 aa10.46□□□□□ -0.74
KCNMA1-293ENST00000640969 H0YAA0 97 aa10.45□□□□□ -0.74
KCNMA1-293ENST00000640969 KRTAP1-4P0C5Y4 121 aa10.44□□□□□ -0.74
KCNMA1-293ENST00000640969 FLNCQ14315 2725 aa10.43□□□□□ -0.74
KCNMA1-293ENST00000640969 ITPR2Q14571 2701 aa10.42□□□□□ -0.74
KCNMA1-293ENST00000640969 ITPR1Q14643 2758 aa10.39□□□□□ -0.75
KCNMA1-293ENST00000640969 P0C880 135 aa10.35□□□□□ -0.75
KCNMA1-293ENST00000640969 VPS13AQ96RL7 3174 aa10.35□□□□□ -0.75
KCNMA1-293ENST00000640969 FRYQ5TBA9 3013 aa10.35□□□□□ -0.75
KCNMA1-293ENST00000640969 XIRP2A4UGR9 3374 aa10.31□□□□□ -0.76
KCNMA1-293ENST00000640969 UNC80Q8N2C7 3258 aa10.28□□□□□ -0.76
KCNMA1-293ENST00000640969 TACC2O95359 2948 aa10.26□□□□□ -0.77
KCNMA1-293ENST00000640969 KRTAP21-3Q3LHN1 58 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms