RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 KRTAP2-3P0C7H8 128 aa3.99□□□□□ -1.77
SCARB2-226ENST00000640916 IGLC3P0DOY3 106 aa3.99□□□□□ -1.77
SCARB2-226ENST00000640916 LGALS3P17931 250 aaKnown RBP3.99□□□□□ -1.77
SCARB2-226ENST00000640916 TMEM170BQ5T4T1 132 aa3.99□□□□□ -1.77
SCARB2-226ENST00000640916 KRTAP2-4Q9BYR9 128 aa3.99□□□□□ -1.77
SCARB2-226ENST00000640916 A0A1B0GV90 55 aa3.98□□□□□ -1.77
SCARB2-226ENST00000640916 SERF1AO75920 110 aa3.98□□□□□ -1.77
SCARB2-226ENST00000640916 ATP11AUNQ6ZP68 121 aa3.98□□□□□ -1.77
SCARB2-226ENST00000640916 COLCA2A8K830 154 aa3.97□□□□□ -1.77
SCARB2-226ENST00000640916 NDUFS5O43920 106 aa3.97□□□□□ -1.77
SCARB2-226ENST00000640916 FABP4P15090 132 aa3.97□□□□□ -1.77
SCARB2-226ENST00000640916 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
SCARB2-226ENST00000640916 NDUFV3P56181 108 aaKnown RBP3.97□□□□□ -1.77
SCARB2-226ENST00000640916 IFI27L1Q96BM0 104 aa3.97□□□□□ -1.77
SCARB2-226ENST00000640916 C20orf166-AS1Q96NR2 134 aa3.97□□□□□ -1.77
SCARB2-226ENST00000640916 PMCHL2Q9BQD1 86 aa3.97□□□□□ -1.77
SCARB2-226ENST00000640916 SS18L2Q9UHA2 77 aa3.97□□□□□ -1.77
SCARB2-226ENST00000640916 KMT2DO14686 5537 aa3.96□□□□□ -1.78
SCARB2-226ENST00000640916 A0A0G2JQZ4 141 aa3.96□□□□□ -1.78
SCARB2-226ENST00000640916 SMIM13P0DJ93 91 aa3.96□□□□□ -1.78
SCARB2-226ENST00000640916 Q1RN00 199 aa3.96□□□□□ -1.78
SCARB2-226ENST00000640916 CHCHD1Q96BP2 118 aaKnown RBP3.96□□□□□ -1.78
SCARB2-226ENST00000640916 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
SCARB2-226ENST00000640916 LINC01549A6NIU2 74 aa3.95□□□□□ -1.78
SCARB2-226ENST00000640916 DDTP30046 118 aa3.95□□□□□ -1.78
SCARB2-226ENST00000640916 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
SCARB2-226ENST00000640916 SFTA2Q6UW10 78 aa3.95□□□□□ -1.78
SCARB2-226ENST00000640916 MIR7-3HGQ8N6C7 128 aa3.95□□□□□ -1.78
SCARB2-226ENST00000640916 LEPROTL1O95214 131 aa3.94□□□□□ -1.78
SCARB2-226ENST00000640916 OCR1Q9BZK8 76 aa3.94□□□□□ -1.78
SCARB2-226ENST00000640916 TRBV20-1A0A075B6N2 111 aa3.93□□□□□ -1.78
SCARB2-226ENST00000640916 LOC107984156A0A0G2JMH3 177 aa3.93□□□□□ -1.78
SCARB2-226ENST00000640916 TMEM223A0PJW6 202 aa3.93□□□□□ -1.78
SCARB2-226ENST00000640916 PSPHP1O15172 72 aa3.93□□□□□ -1.78
SCARB2-226ENST00000640916 ARL17AQ8IVW1 177 aa3.93□□□□□ -1.78
SCARB2-226ENST00000640916 TRAV12-1A0A0B4J245 112 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 TRBV10-2A0A0K0K1G8 114 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 FAM236DA0A1B0GTK5 79 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 HIST1H2BKO60814 126 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 HIST1H2BJP06899 126 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 FAM236CP0DP71 79 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 HIST1H2BOP23527 126 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 HIST1H2BBP33778 126 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 PSMB2P49721 201 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 HIST1H2BDP58876 126 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 TSPEAR-AS2P59090 65 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 HIST1H2BCP62807 126 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 JOSD1Q15040 202 aaPredicted RBP3.92□□□□□ -1.78
SCARB2-226ENST00000640916 HIST2H2BEQ16778 126 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.92□□□□□ -1.78
SCARB2-226ENST00000640916 HIST1H2BHQ93079 126 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 OBSCN-AS1Q96MR7 158 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 HIST1H2BNQ99877 126 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 HIST1H2BMQ99879 126 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 PRO1933Q9H354 126 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 LAMTOR3Q9UHA4 124 aa3.92□□□□□ -1.78
SCARB2-226ENST00000640916 DLEU1O43261 78 aa3.91□□□□□ -1.78
SCARB2-226ENST00000640916 BATFQ16520 125 aa3.91□□□□□ -1.78
SCARB2-226ENST00000640916 MEIG1Q5JSS6 88 aa3.91□□□□□ -1.78
SCARB2-226ENST00000640916 SCGB1D4Q6XE38 83 aa3.91□□□□□ -1.78
SCARB2-226ENST00000640916 RBM12B-AS1Q9P1G2 102 aa3.91□□□□□ -1.78
SCARB2-226ENST00000640916 SMIM26A0A096LP01 95 aa3.9□□□□□ -1.79
SCARB2-226ENST00000640916 KRTAP16-1A8MUX0 517 aa3.9□□□□□ -1.79
SCARB2-226ENST00000640916 C6orf99Q4VX62 202 aa3.9□□□□□ -1.79
SCARB2-226ENST00000640916 SLC25A34Q6PIV7 304 aa3.9□□□□□ -1.79
SCARB2-226ENST00000640916 C12orf57Q99622 126 aa3.9□□□□□ -1.79
SCARB2-226ENST00000640916 HSPB8Q9UJY1 196 aa3.9□□□□□ -1.79
SCARB2-226ENST00000640916 TRAV23DV6A0A075B6W5 121 aa3.89□□□□□ -1.79
SCARB2-226ENST00000640916 ZNF73O43830 326 aaPredicted RBP3.89□□□□□ -1.79
SCARB2-226ENST00000640916 DPM2O94777 84 aa3.89□□□□□ -1.79
SCARB2-226ENST00000640916 NPC2P61916 151 aa3.89□□□□□ -1.79
SCARB2-226ENST00000640916 IGHV6-1A0A0B4J1U7 121 aa3.88□□□□□ -1.79
SCARB2-226ENST00000640916 LEPROTO15243 131 aa3.88□□□□□ -1.79
SCARB2-226ENST00000640916 IGKCP01834 107 aa3.88□□□□□ -1.79
SCARB2-226ENST00000640916 HRES1P13985 223 aa3.88□□□□□ -1.79
SCARB2-226ENST00000640916 PLNP26678 52 aa3.88□□□□□ -1.79
SCARB2-226ENST00000640916 AKR1D1P51857 326 aa3.88□□□□□ -1.79
SCARB2-226ENST00000640916 VPS25Q9BRG1 176 aa3.88□□□□□ -1.79
SCARB2-226ENST00000640916 SYS1-DBNDD2H3BUS1 97 aa3.87□□□□□ -1.79
SCARB2-226ENST00000640916 J3QQQ9 107 aa3.87□□□□□ -1.79
SCARB2-226ENST00000640916 KRTDAPP60985 99 aa3.87□□□□□ -1.79
SCARB2-226ENST00000640916 HERVK_113P61574 105 aa3.87□□□□□ -1.79
SCARB2-226ENST00000640916 PCP2Q8IVA1 136 aa3.87□□□□□ -1.79
SCARB2-226ENST00000640916 TTTY13Q9BZ97 58 aa3.87□□□□□ -1.79
SCARB2-226ENST00000640916 IGKV2D-30A0A075B6S6 120 aa3.86□□□□□ -1.79
SCARB2-226ENST00000640916 MYMXA0A1B0GTQ4 84 aa3.86□□□□□ -1.79
SCARB2-226ENST00000640916 A8MUU9 505 aa3.86□□□□□ -1.79
SCARB2-226ENST00000640916 C3orf79P0CE67 100 aa3.86□□□□□ -1.79
SCARB2-226ENST00000640916 ADAMTSL4-AS1Q5T5F5 129 aa3.86□□□□□ -1.79
SCARB2-226ENST00000640916 ATOH7Q8N100 152 aa3.86□□□□□ -1.79
SCARB2-226ENST00000640916 RPS28P62857 69 aaKnown RBP3.85□□□□□ -1.79
SCARB2-226ENST00000640916 S100A7L2Q5SY68 101 aa3.85□□□□□ -1.79
SCARB2-226ENST00000640916 Q96NJ1 140 aa3.85□□□□□ -1.79
SCARB2-226ENST00000640916 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
SCARB2-226ENST00000640916 SPANXCQ9NY87 97 aa3.85□□□□□ -1.79
SCARB2-226ENST00000640916 NDUFC2O95298 119 aa3.84□□□□□ -1.79
SCARB2-226ENST00000640916 TCL1BO95988 128 aa3.84□□□□□ -1.79
SCARB2-226ENST00000640916 DEFB105AQ8NG35 78 aa3.84□□□□□ -1.79
SCARB2-226ENST00000640916 A0A0J9YXY3 114 aa3.83□□□□□ -1.8
SCARB2-226ENST00000640916 TEX49A0A1B0GTD5 131 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms