RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 HRCT1Q6UXD1 115 aa15.05■□□□□ -0
VEGFA-231ENST00000640499 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.05■□□□□ -0
VEGFA-231ENST00000640499 H0YGX0 51 aa15.02■□□□□ -0
VEGFA-231ENST00000640499 FP248Q71RG6 208 aaPredicted RBP15.02■□□□□ -0
VEGFA-231ENST00000640499 LOC105371267A0A1B0GV96 52 aa15.01□□□□□ -0.01
VEGFA-231ENST00000640499 TRIAP1O43715 76 aa15□□□□□ -0.01
VEGFA-231ENST00000640499 SMIM6P0DI80 62 aa15□□□□□ -0.01
VEGFA-231ENST00000640499 TPRXLQ17RH7 258 aa15□□□□□ -0.01
VEGFA-231ENST00000640499 CD164Q04900 197 aa14.98□□□□□ -0.01
VEGFA-231ENST00000640499 IGLV8-61A0A075B6I0 122 aa14.93□□□□□ -0.02
VEGFA-231ENST00000640499 PPDPFLQ8WWR9 84 aa14.93□□□□□ -0.02
VEGFA-231ENST00000640499 KRTAP13-3Q3SY46 172 aa14.92□□□□□ -0.02
VEGFA-231ENST00000640499 MUC17Q685J3 4493 aa14.91□□□□□ -0.02
VEGFA-231ENST00000640499 OCIAD2Q56VL3 154 aa14.9□□□□□ -0.02
VEGFA-231ENST00000640499 CLEC2BQ92478 149 aa14.9□□□□□ -0.02
VEGFA-231ENST00000640499 A0A1B0GX51 115 aa14.89□□□□□ -0.03
VEGFA-231ENST00000640499 F8WEM9 126 aa14.89□□□□□ -0.03
VEGFA-231ENST00000640499 Q5XG85 94 aa14.87□□□□□ -0.03
VEGFA-231ENST00000640499 LIMD2Q9BT23 127 aa14.87□□□□□ -0.03
VEGFA-231ENST00000640499 IGFL1Q6UW32 110 aa14.86□□□□□ -0.03
VEGFA-231ENST00000640499 SNHG12Q9BXW3 62 aa14.86□□□□□ -0.03
VEGFA-231ENST00000640499 CDIP1Q9H305 208 aa14.86□□□□□ -0.03
VEGFA-231ENST00000640499 PSMB2P49721 201 aa14.85□□□□□ -0.03
VEGFA-231ENST00000640499 SNCGO76070 127 aa14.83□□□□□ -0.04
VEGFA-231ENST00000640499 Q6JHZ5 121 aa14.83□□□□□ -0.04
VEGFA-231ENST00000640499 H3BUT2 72 aa14.82□□□□□ -0.04
VEGFA-231ENST00000640499 MUC2Q02817 5179 aa14.81□□□□□ -0.04
VEGFA-231ENST00000640499 NDUFV3P56181 108 aaKnown RBP14.78□□□□□ -0.04
VEGFA-231ENST00000640499 C1orf195Q5TG92 126 aa14.78□□□□□ -0.04
VEGFA-231ENST00000640499 COX6CP09669 75 aa14.76□□□□□ -0.05
VEGFA-231ENST00000640499 TRBV7-7A0A0K0K1E9 115 aa14.74□□□□□ -0.05
VEGFA-231ENST00000640499 M0R143 59 aa14.74□□□□□ -0.05
VEGFA-231ENST00000640499 FABP2P12104 132 aa14.73□□□□□ -0.05
VEGFA-231ENST00000640499 TSTD3H0UI37 97 aa14.7□□□□□ -0.06
VEGFA-231ENST00000640499 ORMDL1Q9P0S3 153 aa14.69□□□□□ -0.06
VEGFA-231ENST00000640499 H3BMG7 143 aa14.68□□□□□ -0.06
VEGFA-231ENST00000640499 DNAL4O96015 105 aa14.68□□□□□ -0.06
VEGFA-231ENST00000640499 LST1O00453 97 aa14.67□□□□□ -0.06
VEGFA-231ENST00000640499 GHRHP01286 108 aa14.67□□□□□ -0.06
VEGFA-231ENST00000640499 SCGB1C2P0DMR2 95 aa14.67□□□□□ -0.06
VEGFA-231ENST00000640499 TCL1BO95988 128 aa14.66□□□□□ -0.06
VEGFA-231ENST00000640499 ASB16-AS1Q495Z4 193 aa14.66□□□□□ -0.06
VEGFA-231ENST00000640499 NAA38Q9BRA0 125 aaKnown RBP14.66□□□□□ -0.06
VEGFA-231ENST00000640499 TRACP01848 142 aa14.65□□□□□ -0.06
VEGFA-231ENST00000640499 XP32Q5T750 250 aa14.64□□□□□ -0.07
VEGFA-231ENST00000640499 Q6Q795 121 aa14.64□□□□□ -0.07
VEGFA-231ENST00000640499 H3BQ85 93 aa14.6□□□□□ -0.07
VEGFA-231ENST00000640499 TMEM256-PLSCR3K7ERE1 68 aa14.6□□□□□ -0.07
VEGFA-231ENST00000640499 C9orf92A6NGG3 77 aa14.59□□□□□ -0.07
VEGFA-231ENST00000640499 A0A1W2PNM2 257 aa14.58□□□□□ -0.08
VEGFA-231ENST00000640499 TEN1Q86WV5 123 aa14.58□□□□□ -0.08
VEGFA-231ENST00000640499 A0A1B0GV72 72 aa14.56□□□□□ -0.08
VEGFA-231ENST00000640499 UBE2V1Q13404 147 aa14.56□□□□□ -0.08
VEGFA-231ENST00000640499 BATFQ16520 125 aa14.55□□□□□ -0.08
VEGFA-231ENST00000640499 KRTAP4-1Q9BYQ7 146 aa14.51□□□□□ -0.09
VEGFA-231ENST00000640499 A0A087WSZ3 146 aa14.5□□□□□ -0.09
VEGFA-231ENST00000640499 ANKRD29Q8N6D5 301 aa14.5□□□□□ -0.09
VEGFA-231ENST00000640499 BAALC-AS2P0C853 105 aa14.49□□□□□ -0.09
VEGFA-231ENST00000640499 SEC61BP60468 96 aaKnown RBP14.47□□□□□ -0.09
VEGFA-231ENST00000640499 ATXN8Q156A1 80 aa14.47□□□□□ -0.09
VEGFA-231ENST00000640499 FAT4Q6V0I7 4981 aa14.47□□□□□ -0.09
VEGFA-231ENST00000640499 Q96NJ1 140 aa14.45□□□□□ -0.1
VEGFA-231ENST00000640499 TAX1BP3O14907 124 aa14.44□□□□□ -0.1
VEGFA-231ENST00000640499 TRBV7-4A0A0J9YYF1 115 aa14.43□□□□□ -0.1
VEGFA-231ENST00000640499 SS18L2Q9UHA2 77 aa14.43□□□□□ -0.1
VEGFA-231ENST00000640499 C9orf118A6NHY6 69 aa14.4□□□□□ -0.1
VEGFA-231ENST00000640499 CCKP06307 115 aa14.38□□□□□ -0.11
VEGFA-231ENST00000640499 RBM3P98179 157 aaKnown RBP14.38□□□□□ -0.11
VEGFA-231ENST00000640499 A0A0U1RQV1 116 aa14.35□□□□□ -0.11
VEGFA-231ENST00000640499 PCOTHQ58A44 107 aa14.35□□□□□ -0.11
VEGFA-231ENST00000640499 TRBV20-1A0A075B6N2 111 aa14.34□□□□□ -0.11
VEGFA-231ENST00000640499 LYRM7Q5U5X0 104 aa14.33□□□□□ -0.12
VEGFA-231ENST00000640499 A0A1W2PPM0 123 aa14.31□□□□□ -0.12
VEGFA-231ENST00000640499 RPL37P61927 97 aaKnown RBP14.31□□□□□ -0.12
VEGFA-231ENST00000640499 DSCR8Q96T75 97 aa14.31□□□□□ -0.12
VEGFA-231ENST00000640499 OBSCN-AS1Q96MR7 158 aa14.3□□□□□ -0.12
VEGFA-231ENST00000640499 C9JAW5 83 aa14.29□□□□□ -0.12
VEGFA-231ENST00000640499 LINC00472Q9H8W2 130 aa14.27□□□□□ -0.13
VEGFA-231ENST00000640499 VPS25Q9BRG1 176 aa14.26□□□□□ -0.13
VEGFA-231ENST00000640499 JMJD7-PLA2G4BH0Y9G9 81 aa14.22□□□□□ -0.13
VEGFA-231ENST00000640499 DEFB116Q30KQ4 102 aa14.22□□□□□ -0.13
VEGFA-231ENST00000640499 Q6ZQT0 140 aa14.22□□□□□ -0.13
VEGFA-231ENST00000640499 LOC110117498A0A087WWA1 95 aa14.2□□□□□ -0.14
VEGFA-231ENST00000640499 IGKV4-1P06312 121 aa14.2□□□□□ -0.14
VEGFA-231ENST00000640499 MTURNQ8N3F0 131 aa14.19□□□□□ -0.14
VEGFA-231ENST00000640499 LCE2AQ5TA79 106 aaPredicted RBP14.18□□□□□ -0.14
VEGFA-231ENST00000640499 SIGMAR1Q99720 223 aa14.17□□□□□ -0.14
VEGFA-231ENST00000640499 C14orf132Q9NPU4 83 aa14.17□□□□□ -0.14
VEGFA-231ENST00000640499 Q75L30 129 aa14.16□□□□□ -0.14
VEGFA-231ENST00000640499 DSCR10P59022 87 aa14.15□□□□□ -0.14
VEGFA-231ENST00000640499 COL5A1-AS1Q5SY13 56 aa14.14□□□□□ -0.15
VEGFA-231ENST00000640499 H3BT86 120 aa14.13□□□□□ -0.15
VEGFA-231ENST00000640499 NOTCH2NLQ7Z3S9 236 aa14.13□□□□□ -0.15
VEGFA-231ENST00000640499 SPCS1Q9Y6A9 102 aa14.11□□□□□ -0.15
VEGFA-231ENST00000640499 KRTAP19-2Q3LHN2 52 aa14.1□□□□□ -0.15
VEGFA-231ENST00000640499 C20orf166-AS1Q96NR2 134 aa14.1□□□□□ -0.15
VEGFA-231ENST00000640499 PDE6GP18545 87 aa14.09□□□□□ -0.15
VEGFA-231ENST00000640499 A8MUU9 505 aa14.08□□□□□ -0.16
VEGFA-231ENST00000640499 KRTAP16-1A8MUX0 517 aa14.08□□□□□ -0.16
VEGFA-231ENST00000640499 PCP4L1A6NKN8 68 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms