RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
NECAP1-220ENST00000639841 MED9Q9NWA0 146 aa4.03□□□□□ -1.76
NECAP1-220ENST00000639841 IGKV2D-24A0A075B6R9 120 aa4.02□□□□□ -1.77
NECAP1-220ENST00000639841 A0A0G2JQZ4 141 aa4.02□□□□□ -1.77
NECAP1-220ENST00000639841 IGKCP01834 107 aa4.02□□□□□ -1.77
NECAP1-220ENST00000639841 CNBPP62633 177 aaKnown RBP4.02□□□□□ -1.77
NECAP1-220ENST00000639841 CMTM2Q8TAZ6 248 aa4.02□□□□□ -1.77
NECAP1-220ENST00000639841 C20orf78Q9BR46 151 aa4.02□□□□□ -1.77
NECAP1-220ENST00000639841 IGKV2-40A0A087WW87 121 aaPredicted RBP4.02□□□□□ -1.77
NECAP1-220ENST00000639841 IGKV2D-40P01614 121 aaPredicted RBP4.02□□□□□ -1.77
NECAP1-220ENST00000639841 IGHV3-30P01768 117 aa4.02□□□□□ -1.77
NECAP1-220ENST00000639841 IGHV3-33P01772 117 aa4.02□□□□□ -1.77
NECAP1-220ENST00000639841 SFTA3P0C7M3 94 aa4.02□□□□□ -1.77
NECAP1-220ENST00000639841 IGHV3-30-5P0DP03 117 aa4.02□□□□□ -1.77
NECAP1-220ENST00000639841 KRTAP10-4P60372 401 aaPredicted RBP4.02□□□□□ -1.77
NECAP1-220ENST00000639841 C2orf82Q6UX34 121 aa4.02□□□□□ -1.77
NECAP1-220ENST00000639841 TIMM21Q9BVV7 248 aa4.02□□□□□ -1.77
NECAP1-220ENST00000639841 ASIPP42127 132 aa4.01□□□□□ -1.77
NECAP1-220ENST00000639841 SPTSSBQ8NFR3 76 aa4.01□□□□□ -1.77
NECAP1-220ENST00000639841 MRPL35Q9NZE8 188 aaKnown RBP4.01□□□□□ -1.77
NECAP1-220ENST00000639841 FAT1Q14517 4588 aa4.01□□□□□ -1.77
NECAP1-220ENST00000639841 HAMPP81172 84 aa4□□□□□ -1.77
NECAP1-220ENST00000639841 PRR9Q5T870 116 aa4□□□□□ -1.77
NECAP1-220ENST00000639841 LINC00167Q96N53 147 aa4□□□□□ -1.77
NECAP1-220ENST00000639841 C1orf137Q5JT78 98 aa4□□□□□ -1.77
NECAP1-220ENST00000639841 CFAP126Q5VTH2 177 aa4□□□□□ -1.77
NECAP1-220ENST00000639841 SPACA4Q8TDM5 124 aa4□□□□□ -1.77
NECAP1-220ENST00000639841 TRBV10-1A0A0K0K1A3 114 aa3.99□□□□□ -1.77
NECAP1-220ENST00000639841 PPDPFLQ8WWR9 84 aa3.99□□□□□ -1.77
NECAP1-220ENST00000639841 FAM167A-AS1Q96KT0 104 aa3.99□□□□□ -1.77
NECAP1-220ENST00000639841 IGLV4-60A0A075B6I1 120 aa3.98□□□□□ -1.77
NECAP1-220ENST00000639841 F8W1H4 67 aa3.98□□□□□ -1.77
NECAP1-220ENST00000639841 DNAH8Q96JB1 4490 aa3.98□□□□□ -1.77
NECAP1-220ENST00000639841 TRBV7-7A0A0K0K1E9 115 aa3.98□□□□□ -1.77
NECAP1-220ENST00000639841 CSAG1Q6PB30 78 aa3.98□□□□□ -1.77
NECAP1-220ENST00000639841 V9GYH0 126 aa3.98□□□□□ -1.77
NECAP1-220ENST00000639841 HMCN2Q8NDA2 5059 aa3.97□□□□□ -1.77
NECAP1-220ENST00000639841 HCG22E2RYF7 251 aa3.97□□□□□ -1.77
NECAP1-220ENST00000639841 RPL7L1Q6DKI1 246 aaKnown RBP3.97□□□□□ -1.77
NECAP1-220ENST00000639841 ALKAL2Q6UX46 152 aa3.97□□□□□ -1.77
NECAP1-220ENST00000639841 FAM213BQ8TBF2 198 aa3.97□□□□□ -1.77
NECAP1-220ENST00000639841 NMES1Q9C002 83 aa3.97□□□□□ -1.77
NECAP1-220ENST00000639841 WFDC2Q14508 124 aa3.96□□□□□ -1.77
NECAP1-220ENST00000639841 CYSTM1Q9H1C7 97 aa3.96□□□□□ -1.77
NECAP1-220ENST00000639841 MT1HL1P0DM35 61 aa3.95□□□□□ -1.78
NECAP1-220ENST00000639841 KRTAP13-2Q52LG2 175 aa3.95□□□□□ -1.78
NECAP1-220ENST00000639841 TRAV13-2A0A0B4J235 113 aa3.94□□□□□ -1.78
NECAP1-220ENST00000639841 PKHD1L1Q86WI1 4243 aa3.94□□□□□ -1.78
NECAP1-220ENST00000639841 TRBV10-3A0A0K0K1G6 114 aa3.94□□□□□ -1.78
NECAP1-220ENST00000639841 SEC11AP67812 179 aa3.94□□□□□ -1.78
NECAP1-220ENST00000639841 OR10AG1Q8NH19 301 aa3.94□□□□□ -1.78
NECAP1-220ENST00000639841 TMEM167BQ9NRX6 74 aa3.94□□□□□ -1.78
NECAP1-220ENST00000639841 TRBV7-3A0A075B6L6 115 aa3.93□□□□□ -1.78
NECAP1-220ENST00000639841 ATOX1O00244 68 aa3.93□□□□□ -1.78
NECAP1-220ENST00000639841 GAS8-AS1O95177 125 aa3.93□□□□□ -1.78
NECAP1-220ENST00000639841 IFI27L1Q96BM0 104 aa3.93□□□□□ -1.78
NECAP1-220ENST00000639841 LINC01600Q96MT4 127 aa3.93□□□□□ -1.78
NECAP1-220ENST00000639841 TRBV6-8A0A0A6YYG3 113 aa3.93□□□□□ -1.78
NECAP1-220ENST00000639841 UBE2D3P61077 147 aa3.93□□□□□ -1.78
NECAP1-220ENST00000639841 UBE2D2P62837 147 aa3.93□□□□□ -1.78
NECAP1-220ENST00000639841 KRTAP2-2Q9BYT5 123 aa3.93□□□□□ -1.78
NECAP1-220ENST00000639841 C22orf24Q9Y442 160 aa3.93□□□□□ -1.78
NECAP1-220ENST00000639841 A0A1W2PNN7 141 aa3.92□□□□□ -1.78
NECAP1-220ENST00000639841 RNASE3P12724 160 aaKnown RBP3.92□□□□□ -1.78
NECAP1-220ENST00000639841 SPINK6Q6UWN8 80 aa3.92□□□□□ -1.78
NECAP1-220ENST00000639841 CYTL1Q9NRR1 136 aa3.92□□□□□ -1.78
NECAP1-220ENST00000639841 CDC42SE1Q9NRR8 79 aa3.92□□□□□ -1.78
NECAP1-220ENST00000639841 PLAC8Q9NZF1 115 aa3.92□□□□□ -1.78
NECAP1-220ENST00000639841 FAT3Q8TDW7 4589 aa3.91□□□□□ -1.78
NECAP1-220ENST00000639841 ANGP03950 147 aaKnown RBP3.91□□□□□ -1.78
NECAP1-220ENST00000639841 KRTAP5-11Q6L8G4 156 aa3.91□□□□□ -1.78
NECAP1-220ENST00000639841 LINC00299Q6ZSB3 139 aa3.91□□□□□ -1.78
NECAP1-220ENST00000639841 TRBV25-1A0A075B6N4 114 aa3.9□□□□□ -1.79
NECAP1-220ENST00000639841 TVP23CQ96ET8 276 aa3.9□□□□□ -1.79
NECAP1-220ENST00000639841 LIMD2Q9BT23 127 aa3.9□□□□□ -1.79
NECAP1-220ENST00000639841 UBR4Q5T4S7 5183 aa3.9□□□□□ -1.79
NECAP1-220ENST00000639841 TRBV6-1A0A0K0K1D8 114 aa3.89□□□□□ -1.79
NECAP1-220ENST00000639841 KRTDAPP60985 99 aa3.89□□□□□ -1.79
NECAP1-220ENST00000639841 SERF2P84101 59 aa3.89□□□□□ -1.79
NECAP1-220ENST00000639841 ENHOQ6UWT2 76 aa3.89□□□□□ -1.79
NECAP1-220ENST00000639841 UQCR10Q9UDW1 63 aa3.89□□□□□ -1.79
NECAP1-220ENST00000639841 CYP4F30PQ9H0H9 118 aa3.89□□□□□ -1.79
NECAP1-220ENST00000639841 A8MU10 97 aa3.88□□□□□ -1.79
NECAP1-220ENST00000639841 H3BVH4 76 aa3.88□□□□□ -1.79
NECAP1-220ENST00000639841 SIX6O95475 246 aa3.88□□□□□ -1.79
NECAP1-220ENST00000639841 ARL14EPLP0DKL9 152 aa3.88□□□□□ -1.79
NECAP1-220ENST00000639841 GCHFRP30047 84 aa3.88□□□□□ -1.79
NECAP1-220ENST00000639841 Q5BKY6 102 aa3.88□□□□□ -1.79
NECAP1-220ENST00000639841 FAM74A4Q5TZK3 123 aa3.88□□□□□ -1.79
NECAP1-220ENST00000639841 SERP2Q8N6R1 65 aa3.88□□□□□ -1.79
NECAP1-220ENST00000639841 ARL2-SNX15V9GYD0 113 aa3.88□□□□□ -1.79
NECAP1-220ENST00000639841 ARMS2P0C7Q2 107 aa3.87□□□□□ -1.79
NECAP1-220ENST00000639841 ORMDL1Q9P0S3 153 aa3.87□□□□□ -1.79
NECAP1-220ENST00000639841 SDHAF1A6NFY7 115 aa3.87□□□□□ -1.79
NECAP1-220ENST00000639841 KRTAP10-8P60410 259 aa3.87□□□□□ -1.79
NECAP1-220ENST00000639841 ZNF56Q15929 161 aa3.87□□□□□ -1.79
NECAP1-220ENST00000639841 Q86TA4 180 aa3.87□□□□□ -1.79
NECAP1-220ENST00000639841 IGKV2-28A0A075B6P5 120 aa3.86□□□□□ -1.79
NECAP1-220ENST00000639841 IGKV2D-28P01615 120 aa3.86□□□□□ -1.79
NECAP1-220ENST00000639841 LRP1Q07954 4544 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms