RNA–Protein interactions for RNA: ENST00000639453.1

CCDC7-214, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-214ENST00000639453 NOP10Q9NPE3 64 aaKnown RBP1.63□□□□□ -2.15
CCDC7-214ENST00000639453 M0QY20 66 aa1.62□□□□□ -2.15
CCDC7-214ENST00000639453 PDE4DIPQ5VU43 2346 aa1.62□□□□□ -2.15
CCDC7-214ENST00000639453 DEFB106AQ8N104 65 aa1.61□□□□□ -2.15
CCDC7-214ENST00000639453 PTPRQQ9UMZ3 2332 aa1.61□□□□□ -2.15
CCDC7-214ENST00000639453 KNL1Q8NG31 2342 aa1.6□□□□□ -2.15
CCDC7-214ENST00000639453 S4R3F8 94 aa1.59□□□□□ -2.15
CCDC7-214ENST00000639453 PTPRZ1P23471 2315 aaPredicted RBP1.57□□□□□ -2.16
CCDC7-214ENST00000639453 FCGBPQ9Y6R7 5405 aaPredicted RBP1.57□□□□□ -2.16
CCDC7-214ENST00000639453 PLCE1Q9P212 2302 aa1.56□□□□□ -2.16
CCDC7-214ENST00000639453 A0A0D9SG42 100 aa1.56□□□□□ -2.16
CCDC7-214ENST00000639453 SPINK1P00995 79 aa1.55□□□□□ -2.16
CCDC7-214ENST00000639453 PKDREJQ9NTG1 2253 aa1.54□□□□□ -2.16
CCDC7-214ENST00000639453 A8MTW9 85 aa1.54□□□□□ -2.16
CCDC7-214ENST00000639453 CLPSL2Q6UWE3 100 aa1.54□□□□□ -2.16
CCDC7-214ENST00000639453 USF3Q68DE3 2245 aa1.54□□□□□ -2.16
CCDC7-214ENST00000639453 ROS1P08922 2347 aa1.54□□□□□ -2.16
CCDC7-214ENST00000639453 PIEZO2Q9H5I5 2752 aa1.53□□□□□ -2.16
CCDC7-214ENST00000639453 TPRP12270 2363 aaKnown RBP1.52□□□□□ -2.17
CCDC7-214ENST00000639453 ALMS1Q8TCU4 4167 aa1.52□□□□□ -2.17
CCDC7-214ENST00000639453 TMEM167AQ8TBQ9 72 aa1.52□□□□□ -2.17
CCDC7-214ENST00000639453 DEFB104AQ8WTQ1 72 aa1.51□□□□□ -2.17
CCDC7-214ENST00000639453 K7EIM0 57 aa1.5□□□□□ -2.17
CCDC7-214ENST00000639453 KRTAP6-3Q3LI67 103 aa1.5□□□□□ -2.17
CCDC7-214ENST00000639453 H0YGG7 62 aa1.49□□□□□ -2.17
CCDC7-214ENST00000639453 FBN3Q75N90 2809 aa1.49□□□□□ -2.17
CCDC7-214ENST00000639453 ZNF462Q96JM2 2506 aa1.48□□□□□ -2.17
CCDC7-214ENST00000639453 C2CD3Q4AC94 2353 aa1.48□□□□□ -2.17
CCDC7-214ENST00000639453 KRTAP21-3Q3LHN1 58 aa1.47□□□□□ -2.17
CCDC7-214ENST00000639453 PCNX1Q96RV3 2341 aa1.46□□□□□ -2.18
CCDC7-214ENST00000639453 SPTBN2O15020 2390 aa1.46□□□□□ -2.18
CCDC7-214ENST00000639453 RPL39P5Q59GN2 51 aa1.45□□□□□ -2.18
CCDC7-214ENST00000639453 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
CCDC7-214ENST00000639453 RP1L1Q8IWN7 2480 aaPredicted RBP1.43□□□□□ -2.18
CCDC7-214ENST00000639453 SPTBN1Q01082 2364 aaKnown RBP1.43□□□□□ -2.18
CCDC7-214ENST00000639453 IGF2RP11717 2491 aa1.43□□□□□ -2.18
CCDC7-214ENST00000639453 DEFB108AA8MXU0 73 aa1.42□□□□□ -2.18
CCDC7-214ENST00000639453 M0QZ58 72 aa1.4□□□□□ -2.19
CCDC7-214ENST00000639453 ABCA2Q9BZC7 2435 aa1.39□□□□□ -2.19
CCDC7-214ENST00000639453 DEFB135Q30KP9 77 aa1.39□□□□□ -2.19
CCDC7-214ENST00000639453 CSPG4Q6UVK1 2322 aa1.39□□□□□ -2.19
CCDC7-214ENST00000639453 MUC6Q6W4X9 2439 aa1.37□□□□□ -2.19
CCDC7-214ENST00000639453 CACNA1HO95180 2353 aa1.36□□□□□ -2.19
CCDC7-214ENST00000639453 TTC28Q96AY4 2481 aa1.33□□□□□ -2.2
CCDC7-214ENST00000639453 KRTAP10-4P60372 401 aaPredicted RBP1.33□□□□□ -2.2
CCDC7-214ENST00000639453 ASH1LQ9NR48 2969 aaKnown RBP1.33□□□□□ -2.2
CCDC7-214ENST00000639453 ABCA12Q86UK0 2595 aa1.32□□□□□ -2.2
CCDC7-214ENST00000639453 M0R2T5 61 aa1.32□□□□□ -2.2
CCDC7-214ENST00000639453 F8P00451 2351 aa1.32□□□□□ -2.2
CCDC7-214ENST00000639453 TENM1Q9UKZ4 2725 aa1.31□□□□□ -2.2
CCDC7-214ENST00000639453 H3BUX3 64 aa1.31□□□□□ -2.2
CCDC7-214ENST00000639453 SPINK6Q6UWN8 80 aa1.31□□□□□ -2.2
CCDC7-214ENST00000639453 DSPP15924 2871 aaKnown RBP1.29□□□□□ -2.2
CCDC7-214ENST00000639453 TNP1P09430 55 aa1.29□□□□□ -2.2
CCDC7-214ENST00000639453 SPART-AS1P0CW21 52 aa1.29□□□□□ -2.2
CCDC7-214ENST00000639453 AKAP6Q13023 2319 aa1.29□□□□□ -2.2
CCDC7-214ENST00000639453 GVINP1Q7Z2Y8 2422 aa1.29□□□□□ -2.2
CCDC7-214ENST00000639453 UNC79Q9P2D8 2635 aa1.28□□□□□ -2.2
CCDC7-214ENST00000639453 MEGF8Q7Z7M0 2845 aa1.28□□□□□ -2.2
CCDC7-214ENST00000639453 REV3LO60673 3130 aa1.28□□□□□ -2.2
CCDC7-214ENST00000639453 APELAP0DMC3 54 aa1.28□□□□□ -2.2
CCDC7-214ENST00000639453 C9orf92A6NGG3 77 aa1.27□□□□□ -2.21
CCDC7-214ENST00000639453 RHPN1-AS1Q9BWJ2 59 aa1.27□□□□□ -2.21
CCDC7-214ENST00000639453 HTN1P15515 57 aa1.26□□□□□ -2.21
CCDC7-214ENST00000639453 PKD1L2Q7Z442 2459 aa1.26□□□□□ -2.21
CCDC7-214ENST00000639453 ZNF292O60281 2723 aa1.25□□□□□ -2.21
CCDC7-214ENST00000639453 TRANK1O15050 2925 aa1.24□□□□□ -2.21
CCDC7-214ENST00000639453 CEP290O15078 2479 aa1.24□□□□□ -2.21
CCDC7-214ENST00000639453 H3BNG1 76 aa1.23□□□□□ -2.21
CCDC7-214ENST00000639453 CELSR2Q9HCU4 2923 aa1.22□□□□□ -2.21
CCDC7-214ENST00000639453 WNK1Q9H4A3 2382 aa1.22□□□□□ -2.21
CCDC7-214ENST00000639453 POLQO75417 2590 aa1.22□□□□□ -2.21
CCDC7-214ENST00000639453 EP300Q09472 2414 aaPredicted RBP1.21□□□□□ -2.22
CCDC7-214ENST00000639453 A0A096LNI7 61 aa1.2□□□□□ -2.22
CCDC7-214ENST00000639453 U3KQA8 63 aa1.2□□□□□ -2.22
CCDC7-214ENST00000639453 DEFB110Q30KQ9 67 aa1.19□□□□□ -2.22
CCDC7-214ENST00000639453 SPTA1P02549 2419 aa1.18□□□□□ -2.22
CCDC7-214ENST00000639453 STATHP02808 62 aa1.18□□□□□ -2.22
CCDC7-214ENST00000639453 PRRC2CQ9Y520 2896 aaKnown RBP1.18□□□□□ -2.22
CCDC7-214ENST00000639453 HECTD1Q9ULT8 2610 aa1.17□□□□□ -2.22
CCDC7-214ENST00000639453 DEFB1P60022 68 aa1.17□□□□□ -2.22
CCDC7-214ENST00000639453 SMR3AQ99954 134 aa1.17□□□□□ -2.22
CCDC7-214ENST00000639453 A0A0C4DFX4 3053 aa1.17□□□□□ -2.22
CCDC7-214ENST00000639453 ACACAQ13085 2346 aa1.16□□□□□ -2.22
CCDC7-214ENST00000639453 DEFB136Q30KP8 78 aa1.15□□□□□ -2.23
CCDC7-214ENST00000639453 CREBBPQ92793 2442 aa1.14□□□□□ -2.23
CCDC7-214ENST00000639453 COL6A5A8TX70 2615 aa1.13□□□□□ -2.23
CCDC7-214ENST00000639453 CHD9Q3L8U1 2897 aa1.13□□□□□ -2.23
CCDC7-214ENST00000639453 TENM4Q6N022 2769 aa1.13□□□□□ -2.23
CCDC7-214ENST00000639453 NCOR1O75376 2440 aa1.13□□□□□ -2.23
CCDC7-214ENST00000639453 GPR98Q8WXG9 6306 aa1.12□□□□□ -2.23
CCDC7-214ENST00000639453 DMBT1Q9UGM3 2413 aaPredicted RBP1.11□□□□□ -2.23
CCDC7-214ENST00000639453 NAV2Q8IVL1 2488 aa1.11□□□□□ -2.23
CCDC7-214ENST00000639453 SRRM2Q9UQ35 2752 aaKnown RBP1.11□□□□□ -2.23
CCDC7-214ENST00000639453 KRTAP2-3P0C7H8 128 aa1.11□□□□□ -2.23
CCDC7-214ENST00000639453 KRTAP2-4Q9BYR9 128 aa1.11□□□□□ -2.23
CCDC7-214ENST00000639453 KRTAP2-1Q9BYU5 128 aa1.11□□□□□ -2.23
CCDC7-214ENST00000639453 AKAP13Q12802 2813 aa1.1□□□□□ -2.23
CCDC7-214ENST00000639453 DEFB124Q8NES8 71 aa1.1□□□□□ -2.23
CCDC7-214ENST00000639453 CCDC168Q8NDH2 2452 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms