RNA–Protein interactions for RNA: ENST00000638824.1

NEK1-209, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 3,642 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-209ENST00000638824 TLX1NBP0CAT3 122 aa1.83□□□□□ -2.12
NEK1-209ENST00000638824 FAT1Q14517 4588 aa1.82□□□□□ -2.12
NEK1-209ENST00000638824 TRBV7-6A0A0J9YX20 115 aa1.82□□□□□ -2.12
NEK1-209ENST00000638824 MIR7-3HGQ8N6C7 128 aa1.82□□□□□ -2.12
NEK1-209ENST00000638824 VPS13BQ7Z7G8 4022 aa1.82□□□□□ -2.12
NEK1-209ENST00000638824 SPATA45Q537H7 98 aa1.82□□□□□ -2.12
NEK1-209ENST00000638824 PHF5AQ7RTV0 110 aaKnown RBP1.82□□□□□ -2.12
NEK1-209ENST00000638824 KRTAP11-1Q8IUC1 163 aa1.82□□□□□ -2.12
NEK1-209ENST00000638824 LITAFQ99732 161 aa1.82□□□□□ -2.12
NEK1-209ENST00000638824 PLAC8Q9NZF1 115 aa1.82□□□□□ -2.12
NEK1-209ENST00000638824 SFTA2Q6UW10 78 aa1.81□□□□□ -2.12
NEK1-209ENST00000638824 IMUPQ9GZP8 106 aa1.81□□□□□ -2.12
NEK1-209ENST00000638824 HERC2O95714 4834 aa1.81□□□□□ -2.12
NEK1-209ENST00000638824 COX17Q14061 63 aa1.81□□□□□ -2.12
NEK1-209ENST00000638824 CYSTM1Q9H1C7 97 aa1.81□□□□□ -2.12
NEK1-209ENST00000638824 LINC00474Q9P2X8 69 aa1.81□□□□□ -2.12
NEK1-209ENST00000638824 EPM2AB3EWF7 344 aa1.81□□□□□ -2.12
NEK1-209ENST00000638824 KRTAP4-16G5E9R7 235 aaPredicted RBP1.81□□□□□ -2.12
NEK1-209ENST00000638824 NCR3O14931 201 aa1.81□□□□□ -2.12
NEK1-209ENST00000638824 TCL1BO95988 128 aa1.81□□□□□ -2.12
NEK1-209ENST00000638824 TMEM258P61165 79 aa1.81□□□□□ -2.12
NEK1-209ENST00000638824 S100A7L2Q5SY68 101 aa1.81□□□□□ -2.12
NEK1-209ENST00000638824 OCR1Q9BZK8 76 aa1.81□□□□□ -2.12
NEK1-209ENST00000638824 C8orf17Q9NRJ1 99 aa1.81□□□□□ -2.12
NEK1-209ENST00000638824 A0A087X002 238 aa1.8□□□□□ -2.12
NEK1-209ENST00000638824 H3BT86 120 aa1.8□□□□□ -2.12
NEK1-209ENST00000638824 COX8AP10176 69 aa1.8□□□□□ -2.12
NEK1-209ENST00000638824 Q5VSD8 79 aa1.8□□□□□ -2.12
NEK1-209ENST00000638824 TEN1Q86WV5 123 aa1.8□□□□□ -2.12
NEK1-209ENST00000638824 IGKV2-28A0A075B6P5 120 aa1.8□□□□□ -2.12
NEK1-209ENST00000638824 K7EP34 96 aa1.8□□□□□ -2.12
NEK1-209ENST00000638824 IGKV2D-28P01615 120 aa1.8□□□□□ -2.12
NEK1-209ENST00000638824 NOTCH2NLQ7Z3S9 236 aa1.8□□□□□ -2.12
NEK1-209ENST00000638824 C22orf24Q9Y442 160 aa1.8□□□□□ -2.12
NEK1-209ENST00000638824 ABCA13Q86UQ4 5058 aa1.8□□□□□ -2.12
NEK1-209ENST00000638824 KRTAP10-4P60372 401 aaPredicted RBP1.8□□□□□ -2.12
NEK1-209ENST00000638824 C2orf91Q6ZV80 131 aa1.8□□□□□ -2.12
NEK1-209ENST00000638824 Q8N1X5 172 aa1.8□□□□□ -2.12
NEK1-209ENST00000638824 LINC00308Q8TCZ7 52 aa1.8□□□□□ -2.12
NEK1-209ENST00000638824 C7orf33Q8WU49 177 aa1.8□□□□□ -2.12
NEK1-209ENST00000638824 FLG2Q5D862 2391 aaPredicted RBP1.8□□□□□ -2.12
NEK1-209ENST00000638824 MYCBP2O75592 4640 aa1.79□□□□□ -2.12
NEK1-209ENST00000638824 UQCRQO14949 82 aa1.79□□□□□ -2.12
NEK1-209ENST00000638824 TIMM17BO60830 172 aa1.79□□□□□ -2.12
NEK1-209ENST00000638824 UBE2BP63146 152 aa1.79□□□□□ -2.12
NEK1-209ENST00000638824 LINC00167Q96N53 147 aa1.79□□□□□ -2.12
NEK1-209ENST00000638824 SPANXDQ9BXN6 97 aa1.79□□□□□ -2.12
NEK1-209ENST00000638824 PSORS1C2Q9UIG4 136 aa1.79□□□□□ -2.12
NEK1-209ENST00000638824 TRACP01848 142 aa1.79□□□□□ -2.12
NEK1-209ENST00000638824 RPL37AP61513 92 aaKnown RBP1.79□□□□□ -2.12
NEK1-209ENST00000638824 RBM3P98179 157 aaKnown RBP1.79□□□□□ -2.12
NEK1-209ENST00000638824 KRTAP3-1Q9BYR8 98 aa1.79□□□□□ -2.12
NEK1-209ENST00000638824 LAMTOR3Q9UHA4 124 aa1.79□□□□□ -2.12
NEK1-209ENST00000638824 hADV29S1A0JD25 119 aa1.79□□□□□ -2.12
NEK1-209ENST00000638824 A6NED7 52 aa1.79□□□□□ -2.12
NEK1-209ENST00000638824 LUZP6Q538Z0 58 aa1.79□□□□□ -2.12
NEK1-209ENST00000638824 MUSTN1Q8IVN3 82 aa1.79□□□□□ -2.12
NEK1-209ENST00000638824 LOC107984156A0A0G2JMH3 177 aa1.78□□□□□ -2.12
NEK1-209ENST00000638824 TRBV10-3A0A0K0K1G6 114 aa1.78□□□□□ -2.12
NEK1-209ENST00000638824 CRYGAP11844 174 aa1.78□□□□□ -2.12
NEK1-209ENST00000638824 C1orf137Q5JT78 98 aa1.78□□□□□ -2.12
NEK1-209ENST00000638824 ARL17AQ8IVW1 177 aa1.78□□□□□ -2.12
NEK1-209ENST00000638824 PKHD1L1Q86WI1 4243 aa1.78□□□□□ -2.12
NEK1-209ENST00000638824 IGLV1-50A0A075B6I6 118 aa1.78□□□□□ -2.12
NEK1-209ENST00000638824 ETDBQ3ZM63 59 aa1.78□□□□□ -2.12
NEK1-209ENST00000638824 Q8NBF4 154 aa1.78□□□□□ -2.12
NEK1-209ENST00000638824 FAM229BQ4G0N7 80 aa1.78□□□□□ -2.13
NEK1-209ENST00000638824 UQCR10Q9UDW1 63 aa1.78□□□□□ -2.13
NEK1-209ENST00000638824 PRLHP81277 87 aa1.77□□□□□ -2.13
NEK1-209ENST00000638824 C7orf65Q6ZTY9 151 aa1.77□□□□□ -2.13
NEK1-209ENST00000638824 CEND1Q8N111 149 aa1.77□□□□□ -2.13
NEK1-209ENST00000638824 DIRC1Q969H9 104 aa1.77□□□□□ -2.13
NEK1-209ENST00000638824 LRP1Q07954 4544 aaKnown RBP1.77□□□□□ -2.13
NEK1-209ENST00000638824 H7C2G1 150 aa1.77□□□□□ -2.13
NEK1-209ENST00000638824 IGLV6-57P01721 117 aa1.77□□□□□ -2.13
NEK1-209ENST00000638824 FXYD2P54710 66 aa1.77□□□□□ -2.13
NEK1-209ENST00000638824 PRR4Q16378 134 aa1.77□□□□□ -2.13
NEK1-209ENST00000638824 CLEC2BQ92478 149 aa1.77□□□□□ -2.13
NEK1-209ENST00000638824 HIGD1BQ9P298 99 aa1.77□□□□□ -2.13
NEK1-209ENST00000638824 TRBV10-2A0A0K0K1G8 114 aa1.77□□□□□ -2.13
NEK1-209ENST00000638824 IGLV7-43P04211 117 aa1.77□□□□□ -2.13
NEK1-209ENST00000638824 Q1RN00 199 aa1.77□□□□□ -2.13
NEK1-209ENST00000638824 TRAV23DV6A0A075B6W5 121 aa1.76□□□□□ -2.13
NEK1-209ENST00000638824 A8MWP4 228 aa1.76□□□□□ -2.13
NEK1-209ENST00000638824 BCE1O60756 84 aa1.76□□□□□ -2.13
NEK1-209ENST00000638824 SNCGO76070 127 aa1.76□□□□□ -2.13
NEK1-209ENST00000638824 SERP1Q9Y6X1 66 aa1.76□□□□□ -2.13
NEK1-209ENST00000638824 A8MU10 97 aa1.76□□□□□ -2.13
NEK1-209ENST00000638824 CFC1P0CG37 223 aa1.76□□□□□ -2.13
NEK1-209ENST00000638824 UBE2AP49459 152 aa1.76□□□□□ -2.13
NEK1-209ENST00000638824 MPLKIPQ8TAP9 179 aa1.76□□□□□ -2.13
NEK1-209ENST00000638824 COPS9Q8WXC6 57 aa1.76□□□□□ -2.13
NEK1-209ENST00000638824 RAB37Q96AX2 223 aa1.76□□□□□ -2.13
NEK1-209ENST00000638824 KCNQ1DNQ9H478 68 aa1.76□□□□□ -2.13
NEK1-209ENST00000638824 SPCS1Q9Y6A9 102 aa1.76□□□□□ -2.13
NEK1-209ENST00000638824 IGLV8-61A0A075B6I0 122 aa1.76□□□□□ -2.13
NEK1-209ENST00000638824 SMIM29Q86T20 159 aa1.76□□□□□ -2.13
NEK1-209ENST00000638824 KRTAP13-1Q8IUC0 172 aa1.76□□□□□ -2.13
NEK1-209ENST00000638824 HIGD2AQ9BW72 106 aa1.76□□□□□ -2.13
NEK1-209ENST00000638824 ETDCA0A1B0GVM5 59 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms