RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 KRTAP26-1Q6PEX3 210 aa11.18□□□□□ -0.62
SCARB2-213ENST00000638680 S4R3F8 94 aa11.17□□□□□ -0.62
SCARB2-213ENST00000638680 FLNAP21333 2647 aaKnown RBP11.16□□□□□ -0.62
SCARB2-213ENST00000638680 LINC00483Q53H64 154 aa11.13□□□□□ -0.63
SCARB2-213ENST00000638680 KRTAP1-5Q9BYS1 174 aa11.11□□□□□ -0.63
SCARB2-213ENST00000638680 ITPR3Q14573 2671 aa11.07□□□□□ -0.64
SCARB2-213ENST00000638680 ATRQ13535 2644 aa11.02□□□□□ -0.65
SCARB2-213ENST00000638680 FLNBO75369 2602 aaKnown RBP11.01□□□□□ -0.65
SCARB2-213ENST00000638680 Q6ZR54 194 aa11□□□□□ -0.65
SCARB2-213ENST00000638680 KRTAP4-16G5E9R7 235 aaPredicted RBP11□□□□□ -0.65
SCARB2-213ENST00000638680 A0A0C4DFX4 3053 aa10.99□□□□□ -0.65
SCARB2-213ENST00000638680 KRTAP29-1A8MX34 341 aaPredicted RBP10.99□□□□□ -0.65
SCARB2-213ENST00000638680 ROMO1P60602 79 aa10.98□□□□□ -0.65
SCARB2-213ENST00000638680 HTTP42858 3142 aa10.97□□□□□ -0.65
SCARB2-213ENST00000638680 RPL37P61927 97 aaKnown RBP10.96□□□□□ -0.65
SCARB2-213ENST00000638680 CFAP54Q96N23 3096 aa10.96□□□□□ -0.65
SCARB2-213ENST00000638680 H1FX-AS1Q4G0G2 97 aa10.96□□□□□ -0.66
SCARB2-213ENST00000638680 R4GN34 69 aa10.93□□□□□ -0.66
SCARB2-213ENST00000638680 CHD9Q3L8U1 2897 aa10.93□□□□□ -0.66
SCARB2-213ENST00000638680 M0R2T5 61 aa10.91□□□□□ -0.66
SCARB2-213ENST00000638680 MKI67P46013 3256 aaKnown RBP10.91□□□□□ -0.66
SCARB2-213ENST00000638680 A0A0A0MQY5 61 aa10.9□□□□□ -0.67
SCARB2-213ENST00000638680 PANO1I0J062 215 aa10.88□□□□□ -0.67
SCARB2-213ENST00000638680 SPATA8Q6RVD6 105 aa10.86□□□□□ -0.67
SCARB2-213ENST00000638680 RANBP2P49792 3224 aaKnown RBP10.86□□□□□ -0.67
SCARB2-213ENST00000638680 KRTAP10-1P60331 282 aa10.85□□□□□ -0.67
SCARB2-213ENST00000638680 MAST4O15021 2626 aa10.85□□□□□ -0.67
SCARB2-213ENST00000638680 KRTAP10-2P60368 255 aa10.84□□□□□ -0.67
SCARB2-213ENST00000638680 ASB16-AS1Q495Z4 193 aa10.82□□□□□ -0.68
SCARB2-213ENST00000638680 LAMA3Q16787 3333 aa10.81□□□□□ -0.68
SCARB2-213ENST00000638680 A0A087X002 238 aa10.81□□□□□ -0.68
SCARB2-213ENST00000638680 NOTCH2NLQ7Z3S9 236 aa10.81□□□□□ -0.68
SCARB2-213ENST00000638680 CHD6Q8TD26 2715 aa10.79□□□□□ -0.68
SCARB2-213ENST00000638680 AKAP13Q12802 2813 aa10.78□□□□□ -0.68
SCARB2-213ENST00000638680 M0QZ58 72 aa10.77□□□□□ -0.69
SCARB2-213ENST00000638680 BRCA2P51587 3418 aa10.77□□□□□ -0.69
SCARB2-213ENST00000638680 CFAP46Q8IYW2 2715 aa10.75□□□□□ -0.69
SCARB2-213ENST00000638680 HELZ2Q9BYK8 2649 aaKnown RBP10.75□□□□□ -0.69
SCARB2-213ENST00000638680 CENPEQ02224 2701 aa10.73□□□□□ -0.69
SCARB2-213ENST00000638680 A6NN06 94 aa10.73□□□□□ -0.69
SCARB2-213ENST00000638680 Q5VSD8 79 aa10.72□□□□□ -0.69
SCARB2-213ENST00000638680 MGAQ8IWI9 3026 aa10.72□□□□□ -0.69
SCARB2-213ENST00000638680 ADM2Q7Z4H4 148 aa10.72□□□□□ -0.69
SCARB2-213ENST00000638680 LAMA2P24043 3122 aaKnown RBP10.71□□□□□ -0.7
SCARB2-213ENST00000638680 SEC61BP60468 96 aaKnown RBP10.69□□□□□ -0.7
SCARB2-213ENST00000638680 KRTAP11-1Q8IUC1 163 aa10.69□□□□□ -0.7
SCARB2-213ENST00000638680 LCE6AA0A183 80 aa10.68□□□□□ -0.7
SCARB2-213ENST00000638680 GCN1Q92616 2671 aaKnown RBP10.68□□□□□ -0.7
SCARB2-213ENST00000638680 NBEAL1Q6ZS30 2694 aa10.65□□□□□ -0.7
SCARB2-213ENST00000638680 TRANK1O15050 2925 aa10.64□□□□□ -0.71
SCARB2-213ENST00000638680 KRTAP7-1Q8IUC3 87 aa10.62□□□□□ -0.71
SCARB2-213ENST00000638680 UNC79Q9P2D8 2635 aa10.61□□□□□ -0.71
SCARB2-213ENST00000638680 KRTAP25-1Q3LHN0 102 aa10.59□□□□□ -0.71
SCARB2-213ENST00000638680 A8MU10 97 aa10.59□□□□□ -0.71
SCARB2-213ENST00000638680 UNC80Q8N2C7 3258 aa10.59□□□□□ -0.71
SCARB2-213ENST00000638680 TRIOO75962 3097 aa10.56□□□□□ -0.72
SCARB2-213ENST00000638680 TEX15Q9BXT5 2789 aa10.55□□□□□ -0.72
SCARB2-213ENST00000638680 PRUNE2Q8WUY3 3088 aa10.55□□□□□ -0.72
SCARB2-213ENST00000638680 WDFY4Q6ZS81 3184 aa10.53□□□□□ -0.72
SCARB2-213ENST00000638680 XIRP2A4UGR9 3374 aa10.52□□□□□ -0.73
SCARB2-213ENST00000638680 NBEAL2Q6ZNJ1 2754 aa10.52□□□□□ -0.73
SCARB2-213ENST00000638680 STAB1Q9NY15 2570 aa10.51□□□□□ -0.73
SCARB2-213ENST00000638680 CDH23Q9H251 3354 aa10.46□□□□□ -0.74
SCARB2-213ENST00000638680 Q6ZRN7 208 aaPredicted RBP10.45□□□□□ -0.74
SCARB2-213ENST00000638680 FLG2Q5D862 2391 aaPredicted RBP10.45□□□□□ -0.74
SCARB2-213ENST00000638680 DMBT1Q9UGM3 2413 aaPredicted RBP10.45□□□□□ -0.74
SCARB2-213ENST00000638680 KRTAP16-1A8MUX0 517 aa10.44□□□□□ -0.74
SCARB2-213ENST00000638680 PLAC4Q8WY50 150 aa10.43□□□□□ -0.74
SCARB2-213ENST00000638680 KRTAP13-1Q8IUC0 172 aa10.42□□□□□ -0.74
SCARB2-213ENST00000638680 FRYQ5TBA9 3013 aa10.42□□□□□ -0.74
SCARB2-213ENST00000638680 RPS29P62273 56 aaKnown RBP10.4□□□□□ -0.74
SCARB2-213ENST00000638680 KRTAP13-2Q52LG2 175 aa10.4□□□□□ -0.74
SCARB2-213ENST00000638680 NOTCH1P46531 2555 aa10.39□□□□□ -0.75
SCARB2-213ENST00000638680 ZNF292O60281 2723 aa10.39□□□□□ -0.75
SCARB2-213ENST00000638680 TEP1Q99973 2627 aaKnown RBP10.35□□□□□ -0.75
SCARB2-213ENST00000638680 CELSR3Q9NYQ7 3312 aa10.35□□□□□ -0.75
SCARB2-213ENST00000638680 FREM2Q5SZK8 3169 aa10.35□□□□□ -0.75
SCARB2-213ENST00000638680 VPS13AQ96RL7 3174 aa10.34□□□□□ -0.75
SCARB2-213ENST00000638680 A8MUU9 505 aa10.33□□□□□ -0.76
SCARB2-213ENST00000638680 SETXQ7Z333 2677 aaKnown RBP10.31□□□□□ -0.76
SCARB2-213ENST00000638680 NDUFAF8A1L188 74 aa10.3□□□□□ -0.76
SCARB2-213ENST00000638680 MAP1AP78559 2803 aaPredicted RBP10.29□□□□□ -0.76
SCARB2-213ENST00000638680 COL6A5A8TX70 2615 aa10.28□□□□□ -0.76
SCARB2-213ENST00000638680 DNAH14Q0VDD8 3507 aa10.27□□□□□ -0.77
SCARB2-213ENST00000638680 DSPP15924 2871 aaKnown RBP10.23□□□□□ -0.77
SCARB2-213ENST00000638680 KALRNO60229 2985 aa10.22□□□□□ -0.77
SCARB2-213ENST00000638680 C20orf166-AS1Q96NR2 134 aa10.22□□□□□ -0.77
SCARB2-213ENST00000638680 SZT2Q5T011 3432 aa10.17□□□□□ -0.78
SCARB2-213ENST00000638680 VCANP13611 3396 aa10.17□□□□□ -0.78
SCARB2-213ENST00000638680 UBR5O95071 2799 aaPredicted RBP10.16□□□□□ -0.78
SCARB2-213ENST00000638680 IGSF10Q6WRI0 2623 aa10.13□□□□□ -0.79
SCARB2-213ENST00000638680 BAHCC1Q9P281 2608 aa10.13□□□□□ -0.79
SCARB2-213ENST00000638680 STAB2Q8WWQ8 2551 aa10.12□□□□□ -0.79
SCARB2-213ENST00000638680 LAMA1P25391 3075 aa10.12□□□□□ -0.79
SCARB2-213ENST00000638680 NBEAQ8NFP9 2946 aa10.03□□□□□ -0.8
SCARB2-213ENST00000638680 ITPR1Q14643 2758 aa10.01□□□□□ -0.81
SCARB2-213ENST00000638680 NSD1Q96L73 2696 aaPredicted RBP10.01□□□□□ -0.81
SCARB2-213ENST00000638680 ITPR2Q14571 2701 aa10□□□□□ -0.81
SCARB2-213ENST00000638680 COL6A3P12111 3177 aa10□□□□□ -0.81
SCARB2-213ENST00000638680 LRBAP50851 2863 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms