RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 Q5XG85 94 aa7.61□□□□□ -1.19
PNKP-228ENST00000637325 HIGD1BQ9P298 99 aa7.61□□□□□ -1.19
PNKP-228ENST00000637325 C9orf92A6NGG3 77 aa7.6□□□□□ -1.19
PNKP-228ENST00000637325 CFC1BP0CG36 223 aa7.6□□□□□ -1.19
PNKP-228ENST00000637325 CFC1P0CG37 223 aa7.6□□□□□ -1.19
PNKP-228ENST00000637325 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.6□□□□□ -1.19
PNKP-228ENST00000637325 TCL1BO95988 128 aa7.59□□□□□ -1.19
PNKP-228ENST00000637325 SNCGO76070 127 aa7.58□□□□□ -1.2
PNKP-228ENST00000637325 Q6JHZ5 121 aa7.58□□□□□ -1.2
PNKP-228ENST00000637325 SNHG12Q9BXW3 62 aa7.58□□□□□ -1.2
PNKP-228ENST00000637325 C1orf195Q5TG92 126 aa7.57□□□□□ -1.2
PNKP-228ENST00000637325 A0A0B4J2C4 111 aa7.56□□□□□ -1.2
PNKP-228ENST00000637325 OCIAD2Q56VL3 154 aa7.56□□□□□ -1.2
PNKP-228ENST00000637325 C2orf91Q6ZV80 131 aa7.56□□□□□ -1.2
PNKP-228ENST00000637325 PPDPFLQ8WWR9 84 aa7.56□□□□□ -1.2
PNKP-228ENST00000637325 TMEM238LA0A1B0GVL6 79 aa7.55□□□□□ -1.2
PNKP-228ENST00000637325 A6NJY4 79 aa7.55□□□□□ -1.2
PNKP-228ENST00000637325 CEND1Q8N111 149 aa7.55□□□□□ -1.2
PNKP-228ENST00000637325 H0YGX0 51 aa7.54□□□□□ -1.2
PNKP-228ENST00000637325 IGFL1Q6UW32 110 aa7.54□□□□□ -1.2
PNKP-228ENST00000637325 CLEC2BQ92478 149 aa7.54□□□□□ -1.2
PNKP-228ENST00000637325 IGLV8-61A0A075B6I0 122 aa7.53□□□□□ -1.2
PNKP-228ENST00000637325 KRTAP4-1Q9BYQ7 146 aa7.53□□□□□ -1.2
PNKP-228ENST00000637325 LCE2AQ5TA79 106 aaPredicted RBP7.52□□□□□ -1.21
PNKP-228ENST00000637325 PRO1854Q9UHT4 67 aa7.52□□□□□ -1.21
PNKP-228ENST00000637325 TRBV7-7A0A0K0K1E9 115 aa7.51□□□□□ -1.21
PNKP-228ENST00000637325 PCOTHQ58A44 107 aa7.51□□□□□ -1.21
PNKP-228ENST00000637325 H3BUT2 72 aa7.5□□□□□ -1.21
PNKP-228ENST00000637325 FXYD2P54710 66 aa7.49□□□□□ -1.21
PNKP-228ENST00000637325 GHRHP01286 108 aa7.48□□□□□ -1.21
PNKP-228ENST00000637325 PYY3Q5JQD4 70 aa7.48□□□□□ -1.21
PNKP-228ENST00000637325 FAM218AQ96MZ4 157 aa7.48□□□□□ -1.21
PNKP-228ENST00000637325 TMA7Q9Y2S6 64 aaKnown RBP7.48□□□□□ -1.21
PNKP-228ENST00000637325 A0A1B0GX51 115 aa7.46□□□□□ -1.22
PNKP-228ENST00000637325 NDUFV3P56181 108 aaKnown RBP7.46□□□□□ -1.22
PNKP-228ENST00000637325 HSD52Q0P140 79 aa7.46□□□□□ -1.22
PNKP-228ENST00000637325 FABP2P12104 132 aa7.45□□□□□ -1.22
PNKP-228ENST00000637325 LST1O00453 97 aa7.44□□□□□ -1.22
PNKP-228ENST00000637325 TRIAP1O43715 76 aa7.44□□□□□ -1.22
PNKP-228ENST00000637325 PSMB2P49721 201 aa7.44□□□□□ -1.22
PNKP-228ENST00000637325 H3BMG7 143 aa7.42□□□□□ -1.22
PNKP-228ENST00000637325 DNAL4O96015 105 aa7.42□□□□□ -1.22
PNKP-228ENST00000637325 RPL37P61927 97 aaKnown RBP7.42□□□□□ -1.22
PNKP-228ENST00000637325 UQCR10Q9UDW1 63 aa7.42□□□□□ -1.22
PNKP-228ENST00000637325 SS18L2Q9UHA2 77 aa7.42□□□□□ -1.22
PNKP-228ENST00000637325 TEN1Q86WV5 123 aa7.41□□□□□ -1.22
PNKP-228ENST00000637325 K7ERJ3 54 aa7.4□□□□□ -1.22
PNKP-228ENST00000637325 COX6CP09669 75 aa7.4□□□□□ -1.22
PNKP-228ENST00000637325 Q6Q795 121 aa7.4□□□□□ -1.22
PNKP-228ENST00000637325 H3BQ85 93 aa7.38□□□□□ -1.23
PNKP-228ENST00000637325 OBSCN-AS1Q96MR7 158 aa7.38□□□□□ -1.23
PNKP-228ENST00000637325 ORMDL1Q9P0S3 153 aa7.38□□□□□ -1.23
PNKP-228ENST00000637325 A0A087WSZ3 146 aa7.36□□□□□ -1.23
PNKP-228ENST00000637325 KRTAP9-2Q9BYQ4 174 aa7.36□□□□□ -1.23
PNKP-228ENST00000637325 ANKRD29Q8N6D5 301 aa7.35□□□□□ -1.23
PNKP-228ENST00000637325 A0A1B0GV72 72 aa7.34□□□□□ -1.23
PNKP-228ENST00000637325 TMEM256-PLSCR3K7ERE1 68 aa7.34□□□□□ -1.23
PNKP-228ENST00000637325 SCGB1C2P0DMR2 95 aa7.33□□□□□ -1.24
PNKP-228ENST00000637325 ATP11AUNQ6ZP68 121 aa7.33□□□□□ -1.24
PNKP-228ENST00000637325 Q96NJ1 140 aa7.33□□□□□ -1.24
PNKP-228ENST00000637325 LCE2CQ5TA81 110 aa7.32□□□□□ -1.24
PNKP-228ENST00000637325 A0A1W2PNM2 257 aa7.31□□□□□ -1.24
PNKP-228ENST00000637325 Q75L30 129 aa7.31□□□□□ -1.24
PNKP-228ENST00000637325 KRTAP19-2Q3LHN2 52 aa7.3□□□□□ -1.24
PNKP-228ENST00000637325 TRBV7-4A0A0J9YYF1 115 aa7.28□□□□□ -1.24
PNKP-228ENST00000637325 TRACP01848 142 aa7.28□□□□□ -1.24
PNKP-228ENST00000637325 UBE2V1Q13404 147 aa7.28□□□□□ -1.24
PNKP-228ENST00000637325 COX6B2Q6YFQ2 88 aa7.28□□□□□ -1.24
PNKP-228ENST00000637325 SIGMAR1Q99720 223 aa7.28□□□□□ -1.24
PNKP-228ENST00000637325 CCKP06307 115 aa7.26□□□□□ -1.25
PNKP-228ENST00000637325 MT1HP80294 61 aa7.26□□□□□ -1.25
PNKP-228ENST00000637325 IGKV4-1P06312 121 aa7.25□□□□□ -1.25
PNKP-228ENST00000637325 M0R143 59 aa7.24□□□□□ -1.25
PNKP-228ENST00000637325 DSCR10P59022 87 aa7.24□□□□□ -1.25
PNKP-228ENST00000637325 RBM3P98179 157 aaKnown RBP7.23□□□□□ -1.25
PNKP-228ENST00000637325 C20orf166-AS1Q96NR2 134 aa7.23□□□□□ -1.25
PNKP-228ENST00000637325 VPS25Q9BRG1 176 aa7.23□□□□□ -1.25
PNKP-228ENST00000637325 A8MUU9 505 aa7.22□□□□□ -1.25
PNKP-228ENST00000637325 LINC00313P59037 77 aa7.22□□□□□ -1.25
PNKP-228ENST00000637325 DSCR8Q96T75 97 aa7.22□□□□□ -1.25
PNKP-228ENST00000637325 M0R2T5 61 aa7.21□□□□□ -1.26
PNKP-228ENST00000637325 BAALC-AS2P0C853 105 aa7.21□□□□□ -1.26
PNKP-228ENST00000637325 DEFB116Q30KQ4 102 aa7.21□□□□□ -1.26
PNKP-228ENST00000637325 FLGP20930 4061 aaPredicted RBP7.2□□□□□ -1.26
PNKP-228ENST00000637325 LINC00472Q9H8W2 130 aa7.19□□□□□ -1.26
PNKP-228ENST00000637325 SMIM6P0DI80 62 aa7.18□□□□□ -1.26
PNKP-228ENST00000637325 ATXN8Q156A1 80 aa7.18□□□□□ -1.26
PNKP-228ENST00000637325 NAA38Q9BRA0 125 aaKnown RBP7.18□□□□□ -1.26
PNKP-228ENST00000637325 C9JAW5 83 aa7.17□□□□□ -1.26
PNKP-228ENST00000637325 IGHV6-1A0A0B4J1U7 121 aa7.15□□□□□ -1.26
PNKP-228ENST00000637325 LCE2DQ5TA82 110 aaPredicted RBP7.15□□□□□ -1.26
PNKP-228ENST00000637325 TRBV20-1A0A075B6N2 111 aa7.14□□□□□ -1.27
PNKP-228ENST00000637325 C21orf62-AS1Q17RA5 79 aa7.14□□□□□ -1.27
PNKP-228ENST00000637325 TSTD3H0UI37 97 aa7.13□□□□□ -1.27
PNKP-228ENST00000637325 NOTCH2NLQ7Z3S9 236 aa7.13□□□□□ -1.27
PNKP-228ENST00000637325 KRTAP16-1A8MUX0 517 aa7.12□□□□□ -1.27
PNKP-228ENST00000637325 JMJD7-PLA2G4BH0Y9G9 81 aa7.12□□□□□ -1.27
PNKP-228ENST00000637325 KRTAP10-6P60371 365 aaPredicted RBP7.12□□□□□ -1.27
PNKP-228ENST00000637325 LYRM7Q5U5X0 104 aa7.12□□□□□ -1.27
PNKP-228ENST00000637325 KRTAP9-6A0A140TA67 174 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms