RNA–Protein interactions for RNA: ENST00000637103.1

SMARCA2-258, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-258ENST00000637103 EP400Q96L91 3159 aa6.66□□□□□ -1.34
SMARCA2-258ENST00000637103 ACANP16112 2415 aa6.65□□□□□ -1.34
SMARCA2-258ENST00000637103 PANO1I0J062 215 aa6.61□□□□□ -1.35
SMARCA2-258ENST00000637103 KRTAP1-5Q9BYS1 174 aa6.61□□□□□ -1.35
SMARCA2-258ENST00000637103 SPTBN4Q9H254 2564 aa6.6□□□□□ -1.35
SMARCA2-258ENST00000637103 ADM2Q7Z4H4 148 aa6.6□□□□□ -1.35
SMARCA2-258ENST00000637103 M0QZ58 72 aa6.59□□□□□ -1.35
SMARCA2-258ENST00000637103 A8MU10 97 aa6.56□□□□□ -1.36
SMARCA2-258ENST00000637103 NOTCH2NLQ7Z3S9 236 aa6.55□□□□□ -1.36
SMARCA2-258ENST00000637103 NDUFAF8A1L188 74 aa6.52□□□□□ -1.36
SMARCA2-258ENST00000637103 SEC61BP60468 96 aaKnown RBP6.49□□□□□ -1.37
SMARCA2-258ENST00000637103 M0R2T5 61 aa6.47□□□□□ -1.37
SMARCA2-258ENST00000637103 BPTFQ12830 3046 aa6.47□□□□□ -1.37
SMARCA2-258ENST00000637103 FASNP49327 2511 aaKnown RBP6.46□□□□□ -1.38
SMARCA2-258ENST00000637103 RPS29P62273 56 aaKnown RBP6.45□□□□□ -1.38
SMARCA2-258ENST00000637103 PLAC4Q8WY50 150 aa6.45□□□□□ -1.38
SMARCA2-258ENST00000637103 KRTAP10-1P60331 282 aa6.44□□□□□ -1.38
SMARCA2-258ENST00000637103 KRTAP7-1Q8IUC3 87 aa6.42□□□□□ -1.38
SMARCA2-258ENST00000637103 A8MUU9 505 aa6.42□□□□□ -1.38
SMARCA2-258ENST00000637103 KRTAP11-1Q8IUC1 163 aa6.41□□□□□ -1.38
SMARCA2-258ENST00000637103 EPG5Q9HCE0 2579 aa6.4□□□□□ -1.38
SMARCA2-258ENST00000637103 KRTAP10-2P60368 255 aa6.4□□□□□ -1.39
SMARCA2-258ENST00000637103 KRTAP13-1Q8IUC0 172 aa6.39□□□□□ -1.39
SMARCA2-258ENST00000637103 PRRC2CQ9Y520 2896 aaKnown RBP6.38□□□□□ -1.39
SMARCA2-258ENST00000637103 C20orf166-AS1Q96NR2 134 aa6.35□□□□□ -1.39
SMARCA2-258ENST00000637103 USP24Q9UPU5 2620 aa6.34□□□□□ -1.39
SMARCA2-258ENST00000637103 FLNAP21333 2647 aaKnown RBP6.34□□□□□ -1.4
SMARCA2-258ENST00000637103 Q5VSD8 79 aa6.33□□□□□ -1.4
SMARCA2-258ENST00000637103 MGAM2Q2M2H8 2515 aa6.28□□□□□ -1.4
SMARCA2-258ENST00000637103 KRTAP13-2Q52LG2 175 aa6.28□□□□□ -1.4
SMARCA2-258ENST00000637103 Q6ZRN7 208 aaPredicted RBP6.28□□□□□ -1.4
SMARCA2-258ENST00000637103 DNAH12Q6ZR08 3092 aa6.25□□□□□ -1.41
SMARCA2-258ENST00000637103 ITPR3Q14573 2671 aa6.25□□□□□ -1.41
SMARCA2-258ENST00000637103 ATRQ13535 2644 aa6.23□□□□□ -1.41
SMARCA2-258ENST00000637103 PP632Q6XCG6 107 aa6.21□□□□□ -1.42
SMARCA2-258ENST00000637103 TNP1P09430 55 aa6.19□□□□□ -1.42
SMARCA2-258ENST00000637103 C10orf95Q9H7T3 257 aa6.19□□□□□ -1.42
SMARCA2-258ENST00000637103 DMBT1Q9UGM3 2413 aaPredicted RBP6.18□□□□□ -1.42
SMARCA2-258ENST00000637103 HECTD1Q9ULT8 2610 aa6.18□□□□□ -1.42
SMARCA2-258ENST00000637103 H0YAA0 97 aa6.17□□□□□ -1.42
SMARCA2-258ENST00000637103 NBEAL1Q6ZS30 2694 aa6.14□□□□□ -1.43
SMARCA2-258ENST00000637103 P0C880 135 aa6.13□□□□□ -1.43
SMARCA2-258ENST00000637103 UNC79Q9P2D8 2635 aa6.12□□□□□ -1.43
SMARCA2-258ENST00000637103 GCN1Q92616 2671 aaKnown RBP6.12□□□□□ -1.43
SMARCA2-258ENST00000637103 CENPEQ02224 2701 aa6.11□□□□□ -1.43
SMARCA2-258ENST00000637103 FLG2Q5D862 2391 aaPredicted RBP6.1□□□□□ -1.43
SMARCA2-258ENST00000637103 GOLGB1Q14789 3259 aaKnown RBP6.1□□□□□ -1.43
SMARCA2-258ENST00000637103 CHD6Q8TD26 2715 aa6.09□□□□□ -1.43
SMARCA2-258ENST00000637103 MAST4O15021 2626 aa6.08□□□□□ -1.44
SMARCA2-258ENST00000637103 CHD7Q9P2D1 2997 aa6.06□□□□□ -1.44
SMARCA2-258ENST00000637103 AKAP13Q12802 2813 aa6.04□□□□□ -1.44
SMARCA2-258ENST00000637103 A0A0C4DFX4 3053 aa6.04□□□□□ -1.44
SMARCA2-258ENST00000637103 C5orf42Q9H799 3197 aa5.99□□□□□ -1.45
SMARCA2-258ENST00000637103 CHD9Q3L8U1 2897 aa5.99□□□□□ -1.45
SMARCA2-258ENST00000637103 HELZ2Q9BYK8 2649 aaKnown RBP5.96□□□□□ -1.45
SMARCA2-258ENST00000637103 CEP350Q5VT06 3117 aa5.96□□□□□ -1.45
SMARCA2-258ENST00000637103 FLNBO75369 2602 aaKnown RBP5.96□□□□□ -1.46
SMARCA2-258ENST00000637103 NBEAL2Q6ZNJ1 2754 aa5.95□□□□□ -1.46
SMARCA2-258ENST00000637103 CFAP46Q8IYW2 2715 aa5.94□□□□□ -1.46
SMARCA2-258ENST00000637103 STAB1Q9NY15 2570 aa5.94□□□□□ -1.46
SMARCA2-258ENST00000637103 CFAP54Q96N23 3096 aa5.94□□□□□ -1.46
SMARCA2-258ENST00000637103 KRTAP1-4P0C5Y4 121 aa5.93□□□□□ -1.46
SMARCA2-258ENST00000637103 KRTAP10-8P60410 259 aa5.92□□□□□ -1.46
SMARCA2-258ENST00000637103 NOTCH1P46531 2555 aa5.9□□□□□ -1.47
SMARCA2-258ENST00000637103 KRTAP13-3Q3SY46 172 aa5.89□□□□□ -1.47
SMARCA2-258ENST00000637103 XP32Q5T750 250 aa5.88□□□□□ -1.47
SMARCA2-258ENST00000637103 STAB2Q8WWQ8 2551 aa5.87□□□□□ -1.47
SMARCA2-258ENST00000637103 TEX15Q9BXT5 2789 aa5.87□□□□□ -1.47
SMARCA2-258ENST00000637103 TRANK1O15050 2925 aa5.86□□□□□ -1.47
SMARCA2-258ENST00000637103 UTRNP46939 3433 aa5.85□□□□□ -1.47
SMARCA2-258ENST00000637103 TEP1Q99973 2627 aaKnown RBP5.84□□□□□ -1.47
SMARCA2-258ENST00000637103 SETXQ7Z333 2677 aaKnown RBP5.84□□□□□ -1.48
SMARCA2-258ENST00000637103 MGAQ8IWI9 3026 aa5.83□□□□□ -1.48
SMARCA2-258ENST00000637103 BAHCC1Q9P281 2608 aa5.8□□□□□ -1.48
SMARCA2-258ENST00000637103 COL6A5A8TX70 2615 aa5.79□□□□□ -1.48
SMARCA2-258ENST00000637103 ZNF292O60281 2723 aa5.76□□□□□ -1.49
SMARCA2-258ENST00000637103 ITPR1Q14643 2758 aa5.75□□□□□ -1.49
SMARCA2-258ENST00000637103 NSD1Q96L73 2696 aaPredicted RBP5.74□□□□□ -1.49
SMARCA2-258ENST00000637103 HTTP42858 3142 aa5.74□□□□□ -1.49
SMARCA2-258ENST00000637103 PCNTO95613 3336 aa5.74□□□□□ -1.49
SMARCA2-258ENST00000637103 KMT2BQ9UMN6 2715 aaPredicted RBP5.73□□□□□ -1.49
SMARCA2-258ENST00000637103 FRYQ5TBA9 3013 aa5.73□□□□□ -1.49
SMARCA2-258ENST00000637103 KRTAP12-2P59991 146 aa5.72□□□□□ -1.49
SMARCA2-258ENST00000637103 APCP25054 2843 aa5.71□□□□□ -1.49
SMARCA2-258ENST00000637103 TPRXLQ17RH7 258 aa5.71□□□□□ -1.49
SMARCA2-258ENST00000637103 TRIOO75962 3097 aa5.67□□□□□ -1.5
SMARCA2-258ENST00000637103 KRTAP13-4Q3LI77 160 aa5.65□□□□□ -1.5
SMARCA2-258ENST00000637103 KALRNO60229 2985 aa5.65□□□□□ -1.5
SMARCA2-258ENST00000637103 UBR5O95071 2799 aaPredicted RBP5.65□□□□□ -1.51
SMARCA2-258ENST00000637103 A0A1B0GVY2 172 aa5.64□□□□□ -1.51
SMARCA2-258ENST00000637103 MAP1AP78559 2803 aaPredicted RBP5.63□□□□□ -1.51
SMARCA2-258ENST00000637103 ITPR2Q14571 2701 aa5.63□□□□□ -1.51
SMARCA2-258ENST00000637103 KRTAP12-1P59990 96 aa5.62□□□□□ -1.51
SMARCA2-258ENST00000637103 IGSF10Q6WRI0 2623 aa5.61□□□□□ -1.51
SMARCA2-258ENST00000637103 PRO2289Q9P1D8 64 aa5.6□□□□□ -1.51
SMARCA2-258ENST00000637103 LAMA2P24043 3122 aaKnown RBP5.6□□□□□ -1.51
SMARCA2-258ENST00000637103 MKI67P46013 3256 aaKnown RBP5.6□□□□□ -1.51
SMARCA2-258ENST00000637103 DSPP15924 2871 aaKnown RBP5.58□□□□□ -1.52
SMARCA2-258ENST00000637103 WDFY4Q6ZS81 3184 aa5.56□□□□□ -1.52
SMARCA2-258ENST00000637103 UTP20O75691 2785 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms