RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 TYMSOSQ8TAI1 123 aa9.24□□□□□ -0.93
GABRB3-219ENST00000636466 WWC2-AS2Q96NR7 200 aa9.24□□□□□ -0.93
GABRB3-219ENST00000636466 SPAG11AQ6PDA7 123 aa9.23□□□□□ -0.93
GABRB3-219ENST00000636466 C9orf163Q8N9P6 203 aa9.21□□□□□ -0.94
GABRB3-219ENST00000636466 A0A1B0GW54 56 aa9.2□□□□□ -0.94
GABRB3-219ENST00000636466 PLA2G1BP04054 148 aaKnown RBP9.2□□□□□ -0.94
GABRB3-219ENST00000636466 SMR3BP02814 79 aaPredicted RBP9.19□□□□□ -0.94
GABRB3-219ENST00000636466 DMBT1Q9UGM3 2413 aaPredicted RBP9.19□□□□□ -0.94
GABRB3-219ENST00000636466 A0A087WTM6 91 aa9.19□□□□□ -0.94
GABRB3-219ENST00000636466 HRNRQ86YZ3 2850 aaPredicted RBP9.19□□□□□ -0.94
GABRB3-219ENST00000636466 LINC00313P59037 77 aa9.19□□□□□ -0.94
GABRB3-219ENST00000636466 C7orf65Q6ZTY9 151 aa9.18□□□□□ -0.94
GABRB3-219ENST00000636466 TP53AIP1Q9HCN2 124 aa9.18□□□□□ -0.94
GABRB3-219ENST00000636466 IGLV8-61A0A075B6I0 122 aa9.17□□□□□ -0.94
GABRB3-219ENST00000636466 A8MWP4 228 aa9.16□□□□□ -0.94
GABRB3-219ENST00000636466 A0A1W2PNM2 257 aa9.15□□□□□ -0.94
GABRB3-219ENST00000636466 Q96NJ1 140 aa9.14□□□□□ -0.95
GABRB3-219ENST00000636466 APLNQ9ULZ1 77 aa9.12□□□□□ -0.95
GABRB3-219ENST00000636466 ZNF861PO60384 105 aa9.12□□□□□ -0.95
GABRB3-219ENST00000636466 PSORS1C2Q9UIG4 136 aa9.12□□□□□ -0.95
GABRB3-219ENST00000636466 TLX1NBP0CAT3 122 aa9.11□□□□□ -0.95
GABRB3-219ENST00000636466 SMG1Q96Q15 3661 aaKnown RBP9.1□□□□□ -0.95
GABRB3-219ENST00000636466 FAM229AH3BQW9 127 aa9.1□□□□□ -0.95
GABRB3-219ENST00000636466 OBSCN-AS1Q96MR7 158 aa9.1□□□□□ -0.95
GABRB3-219ENST00000636466 DSCR10P59022 87 aa9.1□□□□□ -0.95
GABRB3-219ENST00000636466 A0A1B0GU69 56 aa9.1□□□□□ -0.95
GABRB3-219ENST00000636466 PRR15Q8IV56 129 aa9.1□□□□□ -0.95
GABRB3-219ENST00000636466 RPS28P62857 69 aaKnown RBP9.09□□□□□ -0.95
GABRB3-219ENST00000636466 Q8NDZ9 215 aa9.09□□□□□ -0.95
GABRB3-219ENST00000636466 MRPL34Q9BQ48 92 aaKnown RBP9.09□□□□□ -0.95
GABRB3-219ENST00000636466 ACYP2P14621 99 aa9.09□□□□□ -0.95
GABRB3-219ENST00000636466 MXRA5Q9NR99 2828 aa9.06□□□□□ -0.96
GABRB3-219ENST00000636466 C8orf17Q9NRJ1 99 aa9.05□□□□□ -0.96
GABRB3-219ENST00000636466 A8MUN3 132 aa9.04□□□□□ -0.96
GABRB3-219ENST00000636466 PLA2G2DQ9UNK4 145 aa9.04□□□□□ -0.96
GABRB3-219ENST00000636466 PRO0628Q9UI54 55 aa9.03□□□□□ -0.96
GABRB3-219ENST00000636466 H3BPC8 53 aa9.03□□□□□ -0.96
GABRB3-219ENST00000636466 CNBPP62633 177 aaKnown RBP9.03□□□□□ -0.96
GABRB3-219ENST00000636466 CELSR1Q9NYQ6 3014 aa9.02□□□□□ -0.96
GABRB3-219ENST00000636466 H7BZZ5 65 aa9.02□□□□□ -0.97
GABRB3-219ENST00000636466 C9orf92A6NGG3 77 aa9.02□□□□□ -0.97
GABRB3-219ENST00000636466 TNP2Q05952 138 aa9.02□□□□□ -0.97
GABRB3-219ENST00000636466 KLKP1Q107X0 134 aa9.02□□□□□ -0.97
GABRB3-219ENST00000636466 SPRR4Q96PI1 79 aa9□□□□□ -0.97
GABRB3-219ENST00000636466 A0A1B0GVX0 72 aa9□□□□□ -0.97
GABRB3-219ENST00000636466 IGLV7-43P04211 117 aa9□□□□□ -0.97
GABRB3-219ENST00000636466 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9□□□□□ -0.97
GABRB3-219ENST00000636466 COA5Q86WW8 74 aa8.99□□□□□ -0.97
GABRB3-219ENST00000636466 SPENQ96T58 3664 aaKnown RBP8.98□□□□□ -0.97
GABRB3-219ENST00000636466 LOC101927531A0A1B0GV80 90 aa8.98□□□□□ -0.97
GABRB3-219ENST00000636466 IGLV5-48A0A075B6I7 105 aa8.98□□□□□ -0.97
GABRB3-219ENST00000636466 SSBP3-AS1Q7Z2R9 100 aa8.98□□□□□ -0.97
GABRB3-219ENST00000636466 ATP11AUNQ6ZP68 121 aa8.97□□□□□ -0.97
GABRB3-219ENST00000636466 WIPF1O43516 503 aa8.97□□□□□ -0.97
GABRB3-219ENST00000636466 LINC00304Q8N9R0 145 aa8.95□□□□□ -0.98
GABRB3-219ENST00000636466 C8orf87E5RJ46 101 aa8.94□□□□□ -0.98
GABRB3-219ENST00000636466 KRTAP1-5Q9BYS1 174 aa8.91□□□□□ -0.98
GABRB3-219ENST00000636466 LINC01600Q96MT4 127 aa8.91□□□□□ -0.98
GABRB3-219ENST00000636466 IGLV5-37A0A075B6J1 123 aa8.9□□□□□ -0.99
GABRB3-219ENST00000636466 TENM3Q9P273 2699 aa8.89□□□□□ -0.99
GABRB3-219ENST00000636466 SVEP1Q4LDE5 3571 aa8.89□□□□□ -0.99
GABRB3-219ENST00000636466 CUBNO60494 3623 aa8.88□□□□□ -0.99
GABRB3-219ENST00000636466 LINC00336Q6ZUF6 198 aa8.88□□□□□ -0.99
GABRB3-219ENST00000636466 PKD1L1Q8TDX9 2849 aa8.88□□□□□ -0.99
GABRB3-219ENST00000636466 CSMD1Q96PZ7 3565 aa8.85□□□□□ -0.99
GABRB3-219ENST00000636466 OCR1Q9BZK8 76 aa8.84□□□□□ -0.99
GABRB3-219ENST00000636466 Q8N1X5 172 aa8.83□□□□□ -1
GABRB3-219ENST00000636466 J3QL48 77 aa8.82□□□□□ -1
GABRB3-219ENST00000636466 PRR26Q8N8Z3 221 aa8.81□□□□□ -1
GABRB3-219ENST00000636466 FBN1P35555 2871 aaKnown RBP8.81□□□□□ -1
GABRB3-219ENST00000636466 CYSTM1Q9H1C7 97 aa8.8□□□□□ -1
GABRB3-219ENST00000636466 KRTAP26-1Q6PEX3 210 aa8.78□□□□□ -1
GABRB3-219ENST00000636466 SPRR1AP35321 89 aa8.76□□□□□ -1.01
GABRB3-219ENST00000636466 UQCR11O14957 56 aa8.75□□□□□ -1.01
GABRB3-219ENST00000636466 TENM1Q9UKZ4 2725 aa8.73□□□□□ -1.01
GABRB3-219ENST00000636466 COX6B2Q6YFQ2 88 aa8.7□□□□□ -1.02
GABRB3-219ENST00000636466 CYP4F30PQ9H0H9 118 aa8.7□□□□□ -1.02
GABRB3-219ENST00000636466 BSNQ9UPA5 3926 aa8.69□□□□□ -1.02
GABRB3-219ENST00000636466 PANO1I0J062 215 aa8.69□□□□□ -1.02
GABRB3-219ENST00000636466 MIR22HGQ0VDD5 57 aa8.67□□□□□ -1.02
GABRB3-219ENST00000636466 VWFP04275 2813 aa8.67□□□□□ -1.02
GABRB3-219ENST00000636466 PLAC8Q9NZF1 115 aa8.66□□□□□ -1.02
GABRB3-219ENST00000636466 Q8N9P0 234 aaPredicted RBP8.66□□□□□ -1.02
GABRB3-219ENST00000636466 MMP24-AS1A0A0U1RRL7 71 aa8.65□□□□□ -1.02
GABRB3-219ENST00000636466 PDZD2O15018 2839 aa8.65□□□□□ -1.03
GABRB3-219ENST00000636466 SPANXA2-OT1Q8N9U9 137 aa8.64□□□□□ -1.03
GABRB3-219ENST00000636466 A0A0D9SG42 100 aa8.63□□□□□ -1.03
GABRB3-219ENST00000636466 KRTAP10-2P60368 255 aa8.62□□□□□ -1.03
GABRB3-219ENST00000636466 LINC01554Q52M75 96 aa8.62□□□□□ -1.03
GABRB3-219ENST00000636466 ZFHX3Q15911 3703 aa8.62□□□□□ -1.03
GABRB3-219ENST00000636466 HRES1P13985 223 aa8.61□□□□□ -1.03
GABRB3-219ENST00000636466 LINC00472Q9H8W2 130 aa8.61□□□□□ -1.03
GABRB3-219ENST00000636466 FAM229BQ4G0N7 80 aa8.6□□□□□ -1.03
GABRB3-219ENST00000636466 OTOGQ6ZRI0 2925 aa8.6□□□□□ -1.03
GABRB3-219ENST00000636466 KRTAP10-1P60331 282 aa8.57□□□□□ -1.04
GABRB3-219ENST00000636466 CSMD2Q7Z408 3487 aa8.56□□□□□ -1.04
GABRB3-219ENST00000636466 CD164Q04900 197 aa8.56□□□□□ -1.04
GABRB3-219ENST00000636466 SPRR1BP22528 89 aa8.56□□□□□ -1.04
GABRB3-219ENST00000636466 IGLV7-46A0A075B6I9 117 aa8.55□□□□□ -1.04
GABRB3-219ENST00000636466 SRRM2Q9UQ35 2752 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms