RNA–Protein interactions for RNA: ENST00000636384.2

SCN2A-211, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 9,007 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-211ENST00000636384 A0A087WTM6 91 aa2.89□□□□□ -1.95
SCN2A-211ENST00000636384 CASC10Q5T4H9 136 aa2.88□□□□□ -1.95
SCN2A-211ENST00000636384 NSD1Q96L73 2696 aaPredicted RBP2.88□□□□□ -1.95
SCN2A-211ENST00000636384 ANAPC11Q9NYG5 84 aa2.88□□□□□ -1.95
SCN2A-211ENST00000636384 LINC00612Q8N6U2 182 aa2.88□□□□□ -1.95
SCN2A-211ENST00000636384 COL4A2P08572 1712 aa2.87□□□□□ -1.95
SCN2A-211ENST00000636384 ATRQ13535 2644 aa2.87□□□□□ -1.95
SCN2A-211ENST00000636384 SPRR1BP22528 89 aa2.87□□□□□ -1.95
SCN2A-211ENST00000636384 NOTCH2NLQ7Z3S9 236 aa2.86□□□□□ -1.95
SCN2A-211ENST00000636384 SMR3BP02814 79 aaPredicted RBP2.86□□□□□ -1.95
SCN2A-211ENST00000636384 Q5VSD8 79 aa2.86□□□□□ -1.95
SCN2A-211ENST00000636384 A8MUU9 505 aa2.84□□□□□ -1.95
SCN2A-211ENST00000636384 UNC79Q9P2D8 2635 aa2.84□□□□□ -1.95
SCN2A-211ENST00000636384 CRIP3Q6Q6R5 217 aa2.83□□□□□ -1.96
SCN2A-211ENST00000636384 CEP295Q9C0D2 2601 aa2.82□□□□□ -1.96
SCN2A-211ENST00000636384 IGSF10Q6WRI0 2623 aa2.81□□□□□ -1.96
SCN2A-211ENST00000636384 OXTP01178 125 aa2.81□□□□□ -1.96
SCN2A-211ENST00000636384 KMT2BQ9UMN6 2715 aaPredicted RBP2.81□□□□□ -1.96
SCN2A-211ENST00000636384 WISP2O76076 250 aa2.8□□□□□ -1.96
SCN2A-211ENST00000636384 KRTAP11-1Q8IUC1 163 aa2.8□□□□□ -1.96
SCN2A-211ENST00000636384 SMR3AQ99954 134 aa2.8□□□□□ -1.96
SCN2A-211ENST00000636384 MAST4O15021 2626 aa2.8□□□□□ -1.96
SCN2A-211ENST00000636384 TEP1Q99973 2627 aaKnown RBP2.8□□□□□ -1.96
SCN2A-211ENST00000636384 LINC00472Q9H8W2 130 aa2.79□□□□□ -1.96
SCN2A-211ENST00000636384 ANKRD11Q6UB99 2663 aaPredicted RBP2.79□□□□□ -1.96
SCN2A-211ENST00000636384 KRTAP26-1Q6PEX3 210 aa2.79□□□□□ -1.96
SCN2A-211ENST00000636384 COL6A5A8TX70 2615 aa2.79□□□□□ -1.96
SCN2A-211ENST00000636384 GIG44P09565 113 aaPredicted RBP2.79□□□□□ -1.96
SCN2A-211ENST00000636384 COL4A3Q01955 1670 aa2.77□□□□□ -1.97
SCN2A-211ENST00000636384 A0A096LNT2 108 aa2.77□□□□□ -1.97
SCN2A-211ENST00000636384 KRTAP4-16G5E9R7 235 aaPredicted RBP2.77□□□□□ -1.97
SCN2A-211ENST00000636384 PRO2289Q9P1D8 64 aa2.75□□□□□ -1.97
SCN2A-211ENST00000636384 GCN1Q92616 2671 aaKnown RBP2.75□□□□□ -1.97
SCN2A-211ENST00000636384 CYSTM1Q9H1C7 97 aa2.75□□□□□ -1.97
SCN2A-211ENST00000636384 SRCAPQ6ZRS2 3230 aa2.75□□□□□ -1.97
SCN2A-211ENST00000636384 COL4A5P29400 1685 aa2.74□□□□□ -1.97
SCN2A-211ENST00000636384 A8MU10 97 aa2.73□□□□□ -1.97
SCN2A-211ENST00000636384 INE1O15225 51 aa2.73□□□□□ -1.97
SCN2A-211ENST00000636384 COL4A1P02462 1669 aa2.73□□□□□ -1.97
SCN2A-211ENST00000636384 KRTAP23-1A1A580 65 aa2.73□□□□□ -1.97
SCN2A-211ENST00000636384 SPRR1AP35321 89 aa2.73□□□□□ -1.97
SCN2A-211ENST00000636384 PLAC8Q9NZF1 115 aa2.72□□□□□ -1.97
SCN2A-211ENST00000636384 ITPR2Q14571 2701 aa2.72□□□□□ -1.97
SCN2A-211ENST00000636384 KRTAP10-8P60410 259 aa2.69□□□□□ -1.98
SCN2A-211ENST00000636384 RPS29P62273 56 aaKnown RBP2.67□□□□□ -1.98
SCN2A-211ENST00000636384 K7EIL1 84 aa2.67□□□□□ -1.98
SCN2A-211ENST00000636384 FLNBO75369 2602 aaKnown RBP2.67□□□□□ -1.98
SCN2A-211ENST00000636384 CHD9Q3L8U1 2897 aa2.66□□□□□ -1.98
SCN2A-211ENST00000636384 ITPR3Q14573 2671 aa2.65□□□□□ -1.98
SCN2A-211ENST00000636384 SETXQ7Z333 2677 aaKnown RBP2.65□□□□□ -1.99
SCN2A-211ENST00000636384 APCP25054 2843 aa2.64□□□□□ -1.99
SCN2A-211ENST00000636384 TRIOO75962 3097 aa2.64□□□□□ -1.99
SCN2A-211ENST00000636384 KRTAP10-9P60411 292 aa2.64□□□□□ -1.99
SCN2A-211ENST00000636384 UTP20O75691 2785 aaKnown RBP2.63□□□□□ -1.99
SCN2A-211ENST00000636384 KRTAP10-11P60412 298 aa2.63□□□□□ -1.99
SCN2A-211ENST00000636384 KRTAP29-1A8MX34 341 aaPredicted RBP2.63□□□□□ -1.99
SCN2A-211ENST00000636384 LCE6AA0A183 80 aa2.59□□□□□ -2
SCN2A-211ENST00000636384 UBR5O95071 2799 aaPredicted RBP2.58□□□□□ -2
SCN2A-211ENST00000636384 TENM3Q9P273 2699 aa2.58□□□□□ -2
SCN2A-211ENST00000636384 ZNF292O60281 2723 aa2.56□□□□□ -2
SCN2A-211ENST00000636384 Q6ZRN7 208 aaPredicted RBP2.56□□□□□ -2
SCN2A-211ENST00000636384 TEX15Q9BXT5 2789 aa2.56□□□□□ -2
SCN2A-211ENST00000636384 FLNAP21333 2647 aaKnown RBP2.54□□□□□ -2
SCN2A-211ENST00000636384 KRTAP12-2P59991 146 aa2.54□□□□□ -2
SCN2A-211ENST00000636384 H0YAA0 97 aa2.53□□□□□ -2
SCN2A-211ENST00000636384 SRRM2Q9UQ35 2752 aaKnown RBP2.53□□□□□ -2
SCN2A-211ENST00000636384 KRTAP13-2Q52LG2 175 aa2.51□□□□□ -2.01
SCN2A-211ENST00000636384 HIVEP1P15822 2718 aa2.47□□□□□ -2.01
SCN2A-211ENST00000636384 KRTAP13-4Q3LI77 160 aa2.47□□□□□ -2.01
SCN2A-211ENST00000636384 KRTAP15-1Q3LI76 137 aa2.46□□□□□ -2.02
SCN2A-211ENST00000636384 KRTAP10-10P60014 251 aa2.46□□□□□ -2.02
SCN2A-211ENST00000636384 ITPR1Q14643 2758 aa2.45□□□□□ -2.02
SCN2A-211ENST00000636384 DNAH12Q6ZR08 3092 aa2.45□□□□□ -2.02
SCN2A-211ENST00000636384 KRTAP10-1P60331 282 aa2.45□□□□□ -2.02
SCN2A-211ENST00000636384 DSPP15924 2871 aaKnown RBP2.44□□□□□ -2.02
SCN2A-211ENST00000636384 MAP1AP78559 2803 aaPredicted RBP2.44□□□□□ -2.02
SCN2A-211ENST00000636384 CHD7Q9P2D1 2997 aa2.42□□□□□ -2.02
SCN2A-211ENST00000636384 CENPFP49454 3210 aa2.42□□□□□ -2.02
SCN2A-211ENST00000636384 LRBAP50851 2863 aa2.42□□□□□ -2.02
SCN2A-211ENST00000636384 KRTAP10-3P60369 221 aa2.41□□□□□ -2.02
SCN2A-211ENST00000636384 CEP350Q5VT06 3117 aa2.4□□□□□ -2.02
SCN2A-211ENST00000636384 C5orf42Q9H799 3197 aa2.4□□□□□ -2.03
SCN2A-211ENST00000636384 REV3LO60673 3130 aa2.39□□□□□ -2.03
SCN2A-211ENST00000636384 UTRNP46939 3433 aa2.39□□□□□ -2.03
SCN2A-211ENST00000636384 KRTAP10-6P60371 365 aaPredicted RBP2.39□□□□□ -2.03
SCN2A-211ENST00000636384 KRTAP10-2P60368 255 aa2.39□□□□□ -2.03
SCN2A-211ENST00000636384 TENM1Q9UKZ4 2725 aa2.38□□□□□ -2.03
SCN2A-211ENST00000636384 TGP01266 2768 aa2.38□□□□□ -2.03
SCN2A-211ENST00000636384 PCNTO95613 3336 aa2.37□□□□□ -2.03
SCN2A-211ENST00000636384 TENM2Q9NT68 2774 aa2.37□□□□□ -2.03
SCN2A-211ENST00000636384 A0A1B0GVY2 172 aa2.36□□□□□ -2.03
SCN2A-211ENST00000636384 A0A0C4DFX4 3053 aa2.36□□□□□ -2.03
SCN2A-211ENST00000636384 EP400Q96L91 3159 aa2.35□□□□□ -2.03
SCN2A-211ENST00000636384 GOLGB1Q14789 3259 aaKnown RBP2.35□□□□□ -2.03
SCN2A-211ENST00000636384 TNRC18O15417 2968 aaPredicted RBP2.35□□□□□ -2.03
SCN2A-211ENST00000636384 PDZD2O15018 2839 aa2.35□□□□□ -2.03
SCN2A-211ENST00000636384 XP32Q5T750 250 aa2.34□□□□□ -2.03
SCN2A-211ENST00000636384 NBEAL2Q6ZNJ1 2754 aa2.34□□□□□ -2.04
SCN2A-211ENST00000636384 TPRXLQ17RH7 258 aa2.33□□□□□ -2.04
SCN2A-211ENST00000636384 KRTAP1-5Q9BYS1 174 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 372.1 ms