RNA–Protein interactions for RNA: ENST00000629088.1

PNKP-222, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-222ENST00000629088 A6NDN8 102 aa8.64□□□□□ -1.03
PNKP-222ENST00000629088 UBE2V1Q13404 147 aa8.64□□□□□ -1.03
PNKP-222ENST00000629088 COPS9Q8WXC6 57 aa8.64□□□□□ -1.03
PNKP-222ENST00000629088 TEX49A0A1B0GTD5 131 aa8.63□□□□□ -1.03
PNKP-222ENST00000629088 Q5XG85 94 aa8.63□□□□□ -1.03
PNKP-222ENST00000629088 HRCT1Q6UXD1 115 aa8.63□□□□□ -1.03
PNKP-222ENST00000629088 KRTAP19-2Q3LHN2 52 aa8.62□□□□□ -1.03
PNKP-222ENST00000629088 CEND1Q8N111 149 aa8.62□□□□□ -1.03
PNKP-222ENST00000629088 HIST1H4GQ99525 98 aa8.62□□□□□ -1.03
PNKP-222ENST00000629088 A0A1B0GWB2 263 aa8.6□□□□□ -1.03
PNKP-222ENST00000629088 IFITM1P13164 125 aa8.6□□□□□ -1.03
PNKP-222ENST00000629088 Q1RN00 199 aa8.6□□□□□ -1.03
PNKP-222ENST00000629088 H7C2G1 150 aa8.59□□□□□ -1.03
PNKP-222ENST00000629088 MT1HP80294 61 aa8.59□□□□□ -1.03
PNKP-222ENST00000629088 PCOTHQ58A44 107 aa8.59□□□□□ -1.03
PNKP-222ENST00000629088 IGLV5-48A0A075B6I7 105 aa8.58□□□□□ -1.04
PNKP-222ENST00000629088 VAMP3Q15836 100 aa8.58□□□□□ -1.04
PNKP-222ENST00000629088 DEFB105AQ8NG35 78 aa8.58□□□□□ -1.04
PNKP-222ENST00000629088 IGLV8-61A0A075B6I0 122 aa8.57□□□□□ -1.04
PNKP-222ENST00000629088 TMEM238LA0A1B0GVL6 79 aa8.57□□□□□ -1.04
PNKP-222ENST00000629088 A4D1N5 150 aa8.57□□□□□ -1.04
PNKP-222ENST00000629088 C9orf92A6NGG3 77 aa8.57□□□□□ -1.04
PNKP-222ENST00000629088 A6NJY4 79 aa8.57□□□□□ -1.04
PNKP-222ENST00000629088 SMIM29Q86T20 159 aa8.57□□□□□ -1.04
PNKP-222ENST00000629088 FXYD2P54710 66 aa8.56□□□□□ -1.04
PNKP-222ENST00000629088 MUSTN1Q8IVN3 82 aa8.55□□□□□ -1.04
PNKP-222ENST00000629088 NHP2Q9NX24 153 aaKnown RBP8.54□□□□□ -1.04
PNKP-222ENST00000629088 CFC1BP0CG36 223 aa8.53□□□□□ -1.04
PNKP-222ENST00000629088 C1orf195Q5TG92 126 aa8.53□□□□□ -1.04
PNKP-222ENST00000629088 TRAV13-2A0A0B4J235 113 aa8.52□□□□□ -1.05
PNKP-222ENST00000629088 C9orf118A6NHY6 69 aa8.52□□□□□ -1.05
PNKP-222ENST00000629088 LORP23490 312 aaPredicted RBP8.49□□□□□ -1.05
PNKP-222ENST00000629088 TCL1BO95988 128 aa8.48□□□□□ -1.05
PNKP-222ENST00000629088 KRTAP10-6P60371 365 aaPredicted RBP8.48□□□□□ -1.05
PNKP-222ENST00000629088 RPL37P61927 97 aaKnown RBP8.48□□□□□ -1.05
PNKP-222ENST00000629088 SMIM11BQ8TCY0 68 aa8.48□□□□□ -1.05
PNKP-222ENST00000629088 RAB37Q96AX2 223 aa8.48□□□□□ -1.05
PNKP-222ENST00000629088 K7EP34 96 aa8.47□□□□□ -1.05
PNKP-222ENST00000629088 K7ERJ3 54 aa8.46□□□□□ -1.06
PNKP-222ENST00000629088 GTF2H5Q6ZYL4 71 aa8.46□□□□□ -1.06
PNKP-222ENST00000629088 A0A0B4J2C4 111 aa8.45□□□□□ -1.06
PNKP-222ENST00000629088 H3BUT2 72 aa8.45□□□□□ -1.06
PNKP-222ENST00000629088 CFC1P0CG37 223 aa8.45□□□□□ -1.06
PNKP-222ENST00000629088 A0A0G2JQZ4 141 aa8.44□□□□□ -1.06
PNKP-222ENST00000629088 A0A1W2PPM0 123 aa8.44□□□□□ -1.06
PNKP-222ENST00000629088 F8WEM9 126 aa8.44□□□□□ -1.06
PNKP-222ENST00000629088 FABP2P12104 132 aa8.44□□□□□ -1.06
PNKP-222ENST00000629088 OCIAD2Q56VL3 154 aa8.44□□□□□ -1.06
PNKP-222ENST00000629088 PRO1854Q9UHT4 67 aa8.44□□□□□ -1.06
PNKP-222ENST00000629088 NAA38Q9BRA0 125 aaKnown RBP8.43□□□□□ -1.06
PNKP-222ENST00000629088 Q6JHZ5 121 aa8.42□□□□□ -1.06
PNKP-222ENST00000629088 FLGP20930 4061 aaPredicted RBP8.42□□□□□ -1.06
PNKP-222ENST00000629088 LINC00575Q6W349 94 aa8.41□□□□□ -1.06
PNKP-222ENST00000629088 SPCS1Q9Y6A9 102 aa8.4□□□□□ -1.06
PNKP-222ENST00000629088 M0R2T5 61 aa8.39□□□□□ -1.07
PNKP-222ENST00000629088 LYRM7Q5U5X0 104 aa8.39□□□□□ -1.07
PNKP-222ENST00000629088 Q6ZQY7 126 aa8.38□□□□□ -1.07
PNKP-222ENST00000629088 CLEC2BQ92478 149 aa8.38□□□□□ -1.07
PNKP-222ENST00000629088 hADV29S1A0JD25 119 aa8.37□□□□□ -1.07
PNKP-222ENST00000629088 K7ERU9 68 aa8.37□□□□□ -1.07
PNKP-222ENST00000629088 PCP4P48539 62 aa8.37□□□□□ -1.07
PNKP-222ENST00000629088 TRBV7-7A0A0K0K1E9 115 aa8.36□□□□□ -1.07
PNKP-222ENST00000629088 COX6B2Q6YFQ2 88 aa8.36□□□□□ -1.07
PNKP-222ENST00000629088 PPDPFLQ8WWR9 84 aa8.36□□□□□ -1.07
PNKP-222ENST00000629088 C21orf62-AS1Q17RA5 79 aa8.34□□□□□ -1.07
PNKP-222ENST00000629088 IGFL1Q6UW32 110 aa8.34□□□□□ -1.07
PNKP-222ENST00000629088 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.34□□□□□ -1.07
PNKP-222ENST00000629088 VPS25Q9BRG1 176 aa8.34□□□□□ -1.07
PNKP-222ENST00000629088 TRBV20-1A0A075B6N2 111 aa8.33□□□□□ -1.08
PNKP-222ENST00000629088 PSMB2P49721 201 aa8.33□□□□□ -1.08
PNKP-222ENST00000629088 SCGB1C2P0DMR2 95 aa8.32□□□□□ -1.08
PNKP-222ENST00000629088 COX6CP09669 75 aa8.31□□□□□ -1.08
PNKP-222ENST00000629088 Q75L30 129 aa8.31□□□□□ -1.08
PNKP-222ENST00000629088 ATP11AUNQ6ZP68 121 aa8.28□□□□□ -1.08
PNKP-222ENST00000629088 F8W1H4 67 aa8.27□□□□□ -1.09
PNKP-222ENST00000629088 TRIAP1O43715 76 aa8.27□□□□□ -1.09
PNKP-222ENST00000629088 OBSCN-AS1Q96MR7 158 aa8.27□□□□□ -1.09
PNKP-222ENST00000629088 PRO0461Q9UI25 63 aa8.27□□□□□ -1.09
PNKP-222ENST00000629088 H3BMG7 143 aa8.26□□□□□ -1.09
PNKP-222ENST00000629088 LST1O00453 97 aa8.25□□□□□ -1.09
PNKP-222ENST00000629088 ATXN8Q156A1 80 aa8.25□□□□□ -1.09
PNKP-222ENST00000629088 Q6Q795 121 aa8.25□□□□□ -1.09
PNKP-222ENST00000629088 SS18L2Q9UHA2 77 aa8.25□□□□□ -1.09
PNKP-222ENST00000629088 H0YGX0 51 aa8.23□□□□□ -1.09
PNKP-222ENST00000629088 SSPOA2VEC9 5147 aa8.23□□□□□ -1.09
PNKP-222ENST00000629088 SNCGO76070 127 aa8.22□□□□□ -1.09
PNKP-222ENST00000629088 KRTAP9-7A8MTY7 169 aa8.2□□□□□ -1.1
PNKP-222ENST00000629088 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.2□□□□□ -1.1
PNKP-222ENST00000629088 USH2AO75445 5202 aa8.2□□□□□ -1.1
PNKP-222ENST00000629088 SMCPP49901 116 aaPredicted RBP8.19□□□□□ -1.1
PNKP-222ENST00000629088 TEN1Q86WV5 123 aa8.19□□□□□ -1.1
PNKP-222ENST00000629088 Q96NJ1 140 aa8.19□□□□□ -1.1
PNKP-222ENST00000629088 C20orf166-AS1Q96NR2 134 aa8.19□□□□□ -1.1
PNKP-222ENST00000629088 ETDBQ3ZM63 59 aa8.18□□□□□ -1.1
PNKP-222ENST00000629088 J3QR89 54 aa8.17□□□□□ -1.1
PNKP-222ENST00000629088 FAM218AQ96MZ4 157 aa8.17□□□□□ -1.1
PNKP-222ENST00000629088 A0A1B0GX51 115 aa8.16□□□□□ -1.1
PNKP-222ENST00000629088 GHRHP01286 108 aa8.16□□□□□ -1.1
PNKP-222ENST00000629088 TRACP01848 142 aa8.16□□□□□ -1.1
PNKP-222ENST00000629088 NDUFV3P56181 108 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms