RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 PPDPFLQ8WWR9 84 aa14.62□□□□□ -0.07
CAPNS1-216ENST00000628306 MUC2Q02817 5179 aa14.62□□□□□ -0.07
CAPNS1-216ENST00000628306 Q6ZQY7 126 aa14.6□□□□□ -0.07
CAPNS1-216ENST00000628306 J3QR89 54 aa14.58□□□□□ -0.08
CAPNS1-216ENST00000628306 K7ERU9 68 aa14.58□□□□□ -0.08
CAPNS1-216ENST00000628306 KRTAP11-1Q8IUC1 163 aa14.57□□□□□ -0.08
CAPNS1-216ENST00000628306 OBSCN-AS1Q96MR7 158 aa14.57□□□□□ -0.08
CAPNS1-216ENST00000628306 Q9BRP9 147 aa14.57□□□□□ -0.08
CAPNS1-216ENST00000628306 BCE1O60756 84 aa14.55□□□□□ -0.08
CAPNS1-216ENST00000628306 PSORS1C2Q9UIG4 136 aa14.54□□□□□ -0.08
CAPNS1-216ENST00000628306 JMJD7-PLA2G4BH0Y9G9 81 aa14.53□□□□□ -0.08
CAPNS1-216ENST00000628306 FAM19A1Q7Z5A9 133 aa14.53□□□□□ -0.08
CAPNS1-216ENST00000628306 TEX49A0A1B0GTD5 131 aa14.52□□□□□ -0.08
CAPNS1-216ENST00000628306 SMCR5Q8TEV8 140 aa14.5□□□□□ -0.09
CAPNS1-216ENST00000628306 IGLV5-48A0A075B6I7 105 aa14.49□□□□□ -0.09
CAPNS1-216ENST00000628306 KRTAP13-1Q8IUC0 172 aa14.48□□□□□ -0.09
CAPNS1-216ENST00000628306 PRR26Q8N8Z3 221 aa14.46□□□□□ -0.1
CAPNS1-216ENST00000628306 UBE2AP49459 152 aa14.45□□□□□ -0.1
CAPNS1-216ENST00000628306 LINC01547P58512 204 aaPredicted RBP14.45□□□□□ -0.1
CAPNS1-216ENST00000628306 ERC2-IT1O76042 136 aa14.44□□□□□ -0.1
CAPNS1-216ENST00000628306 PRLHP81277 87 aa14.44□□□□□ -0.1
CAPNS1-216ENST00000628306 Q8N377 158 aa14.43□□□□□ -0.1
CAPNS1-216ENST00000628306 C1orf137Q5JT78 98 aa14.42□□□□□ -0.1
CAPNS1-216ENST00000628306 NDUFV3P56181 108 aaKnown RBP14.41□□□□□ -0.1
CAPNS1-216ENST00000628306 LAMTOR3Q9UHA4 124 aa14.41□□□□□ -0.1
CAPNS1-216ENST00000628306 C21orf62-AS1Q17RA5 79 aa14.4□□□□□ -0.1
CAPNS1-216ENST00000628306 PDE6GP18545 87 aa14.39□□□□□ -0.11
CAPNS1-216ENST00000628306 RBM3P98179 157 aaKnown RBP14.39□□□□□ -0.11
CAPNS1-216ENST00000628306 HIGD2AQ9BW72 106 aa14.39□□□□□ -0.11
CAPNS1-216ENST00000628306 IGLV7-43P04211 117 aa14.38□□□□□ -0.11
CAPNS1-216ENST00000628306 FAM240AA0A1B0GVK7 77 aa14.37□□□□□ -0.11
CAPNS1-216ENST00000628306 KRTAP1-4P0C5Y4 121 aa14.37□□□□□ -0.11
CAPNS1-216ENST00000628306 SPRR1BP22528 89 aa14.37□□□□□ -0.11
CAPNS1-216ENST00000628306 ST20-AS1Q8NBB2 130 aa14.36□□□□□ -0.11
CAPNS1-216ENST00000628306 LOC110117498A0A087WWA1 95 aa14.35□□□□□ -0.11
CAPNS1-216ENST00000628306 ZNF861PO60384 105 aa14.35□□□□□ -0.11
CAPNS1-216ENST00000628306 ACYP1P07311 99 aa14.35□□□□□ -0.11
CAPNS1-216ENST00000628306 DEFB105AQ8NG35 78 aa14.34□□□□□ -0.11
CAPNS1-216ENST00000628306 C14orf132Q9NPU4 83 aa14.33□□□□□ -0.12
CAPNS1-216ENST00000628306 KRTAP9-2Q9BYQ4 174 aa14.32□□□□□ -0.12
CAPNS1-216ENST00000628306 FAT4Q6V0I7 4981 aa14.31□□□□□ -0.12
CAPNS1-216ENST00000628306 DSCR8Q96T75 97 aa14.31□□□□□ -0.12
CAPNS1-216ENST00000628306 TRBV7-4A0A0J9YYF1 115 aa14.3□□□□□ -0.12
CAPNS1-216ENST00000628306 CCKP06307 115 aa14.3□□□□□ -0.12
CAPNS1-216ENST00000628306 SMIM29Q86T20 159 aa14.29□□□□□ -0.12
CAPNS1-216ENST00000628306 ZNF706Q9Y5V0 76 aaPredicted RBP14.28□□□□□ -0.12
CAPNS1-216ENST00000628306 Q6ZQT0 140 aa14.26□□□□□ -0.13
CAPNS1-216ENST00000628306 IGLV8-61A0A075B6I0 122 aa14.24□□□□□ -0.13
CAPNS1-216ENST00000628306 LINC00483Q53H64 154 aa14.23□□□□□ -0.13
CAPNS1-216ENST00000628306 SPRR4Q96PI1 79 aa14.22□□□□□ -0.13
CAPNS1-216ENST00000628306 PRR4Q16378 134 aa14.22□□□□□ -0.13
CAPNS1-216ENST00000628306 GAGE2AQ6NT46 116 aa14.22□□□□□ -0.13
CAPNS1-216ENST00000628306 A0A1B0GW54 56 aa14.2□□□□□ -0.14
CAPNS1-216ENST00000628306 F8WEM9 126 aa14.2□□□□□ -0.14
CAPNS1-216ENST00000628306 LCE2AQ5TA79 106 aaPredicted RBP14.2□□□□□ -0.14
CAPNS1-216ENST00000628306 CDIP1Q9H305 208 aa14.19□□□□□ -0.14
CAPNS1-216ENST00000628306 C3orf22Q8N5N4 141 aa14.18□□□□□ -0.14
CAPNS1-216ENST00000628306 A0A1B0GV72 72 aa14.17□□□□□ -0.14
CAPNS1-216ENST00000628306 VPS25Q9BRG1 176 aa14.17□□□□□ -0.14
CAPNS1-216ENST00000628306 Q6JHZ5 121 aa14.14□□□□□ -0.15
CAPNS1-216ENST00000628306 MUC17Q685J3 4493 aa14.13□□□□□ -0.15
CAPNS1-216ENST00000628306 LINC00846Q9NV44 126 aa14.09□□□□□ -0.15
CAPNS1-216ENST00000628306 A0A0U1RQV1 116 aa14.08□□□□□ -0.16
CAPNS1-216ENST00000628306 LINC00643Q86TS7 51 aa14.06□□□□□ -0.16
CAPNS1-216ENST00000628306 Q8NBF4 154 aa14.06□□□□□ -0.16
CAPNS1-216ENST00000628306 A0A1W2PNM2 257 aa14.04□□□□□ -0.16
CAPNS1-216ENST00000628306 IGFL1Q6UW32 110 aa14.04□□□□□ -0.16
CAPNS1-216ENST00000628306 SIGMAR1Q99720 223 aa14.04□□□□□ -0.16
CAPNS1-216ENST00000628306 A0A087X002 238 aa14.03□□□□□ -0.16
CAPNS1-216ENST00000628306 Q6Q795 121 aa14.03□□□□□ -0.16
CAPNS1-216ENST00000628306 CRYGAP11844 174 aa14.02□□□□□ -0.17
CAPNS1-216ENST00000628306 UBL5Q9BZL1 73 aa14.02□□□□□ -0.17
CAPNS1-216ENST00000628306 FAM229BQ4G0N7 80 aa14.01□□□□□ -0.17
CAPNS1-216ENST00000628306 KRTAP9-6A0A140TA67 174 aa13.99□□□□□ -0.17
CAPNS1-216ENST00000628306 SSBP3-AS1Q7Z2R9 100 aa13.96□□□□□ -0.18
CAPNS1-216ENST00000628306 TRBV7-7A0A0K0K1E9 115 aa13.94□□□□□ -0.18
CAPNS1-216ENST00000628306 ATP5EP2Q5VTU8 51 aa13.93□□□□□ -0.18
CAPNS1-216ENST00000628306 IGLV9-49A0A0B4J1Y8 123 aa13.92□□□□□ -0.18
CAPNS1-216ENST00000628306 Q6ZVQ6 151 aa13.92□□□□□ -0.18
CAPNS1-216ENST00000628306 MT-ATP8P03928 68 aa13.91□□□□□ -0.18
CAPNS1-216ENST00000628306 C9orf153Q5TBE3 101 aa13.91□□□□□ -0.18
CAPNS1-216ENST00000628306 IMUPQ9GZP8 106 aa13.91□□□□□ -0.18
CAPNS1-216ENST00000628306 ANAPC11Q9NYG5 84 aa13.91□□□□□ -0.18
CAPNS1-216ENST00000628306 NREPQ16612 68 aa13.89□□□□□ -0.19
CAPNS1-216ENST00000628306 KRTAP13-2Q52LG2 175 aa13.89□□□□□ -0.19
CAPNS1-216ENST00000628306 TYMSOSQ8TAI1 123 aa13.88□□□□□ -0.19
CAPNS1-216ENST00000628306 MOBPQ13875 183 aa13.87□□□□□ -0.19
CAPNS1-216ENST00000628306 CD164Q04900 197 aa13.85□□□□□ -0.19
CAPNS1-216ENST00000628306 RETNLBQ9BQ08 111 aa13.85□□□□□ -0.19
CAPNS1-216ENST00000628306 A0A0G2JQZ4 141 aa13.84□□□□□ -0.19
CAPNS1-216ENST00000628306 CXCL6P80162 114 aa13.83□□□□□ -0.19
CAPNS1-216ENST00000628306 A0A087WSZ3 146 aa13.8□□□□□ -0.2
CAPNS1-216ENST00000628306 TPRXLQ17RH7 258 aa13.79□□□□□ -0.2
CAPNS1-216ENST00000628306 SCGB1A1P11684 91 aa13.78□□□□□ -0.2
CAPNS1-216ENST00000628306 LINC00304Q8N9R0 145 aa13.74□□□□□ -0.21
CAPNS1-216ENST00000628306 SS18L2Q9UHA2 77 aa13.74□□□□□ -0.21
CAPNS1-216ENST00000628306 IGKV3D-7A0A0C4DH55 119 aa13.73□□□□□ -0.21
CAPNS1-216ENST00000628306 BPY2O14599 106 aa13.72□□□□□ -0.21
CAPNS1-216ENST00000628306 IGLV7-46A0A075B6I9 117 aa13.7□□□□□ -0.22
CAPNS1-216ENST00000628306 Q5XG85 94 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms