RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 Q6ZR54 194 aa5.32□□□□□ -1.56
GABRB3-216ENST00000628124 C20orf166-AS1Q96NR2 134 aa5.32□□□□□ -1.56
GABRB3-216ENST00000628124 Q8NDZ9 215 aa5.3□□□□□ -1.56
GABRB3-216ENST00000628124 LCE6AA0A183 80 aa5.29□□□□□ -1.56
GABRB3-216ENST00000628124 SPATA8Q6RVD6 105 aa5.29□□□□□ -1.56
GABRB3-216ENST00000628124 EPG5Q9HCE0 2579 aa5.27□□□□□ -1.57
GABRB3-216ENST00000628124 CYSTM1Q9H1C7 97 aa5.25□□□□□ -1.57
GABRB3-216ENST00000628124 KRTAP25-1Q3LHN0 102 aa5.25□□□□□ -1.57
GABRB3-216ENST00000628124 STAB1Q9NY15 2570 aa5.24□□□□□ -1.57
GABRB3-216ENST00000628124 KRTAP10-1P60331 282 aa5.24□□□□□ -1.57
GABRB3-216ENST00000628124 RPS29P62273 56 aaKnown RBP5.23□□□□□ -1.57
GABRB3-216ENST00000628124 A8MUU9 505 aa5.22□□□□□ -1.57
GABRB3-216ENST00000628124 FLNBO75369 2602 aaKnown RBP5.2□□□□□ -1.58
GABRB3-216ENST00000628124 TNP1P09430 55 aa5.2□□□□□ -1.58
GABRB3-216ENST00000628124 ATRQ13535 2644 aa5.2□□□□□ -1.58
GABRB3-216ENST00000628124 KRTAP29-1A8MX34 341 aaPredicted RBP5.2□□□□□ -1.58
GABRB3-216ENST00000628124 MAST4O15021 2626 aa5.2□□□□□ -1.58
GABRB3-216ENST00000628124 DMBT1Q9UGM3 2413 aaPredicted RBP5.19□□□□□ -1.58
GABRB3-216ENST00000628124 KRTAP1-5Q9BYS1 174 aa5.17□□□□□ -1.58
GABRB3-216ENST00000628124 KRTAP10-2P60368 255 aa5.17□□□□□ -1.58
GABRB3-216ENST00000628124 WDR87Q6ZQQ6 2873 aa5.17□□□□□ -1.58
GABRB3-216ENST00000628124 NDUFAF8A1L188 74 aa5.15□□□□□ -1.59
GABRB3-216ENST00000628124 HECTD1Q9ULT8 2610 aa5.14□□□□□ -1.59
GABRB3-216ENST00000628124 KRTAP4-16G5E9R7 235 aaPredicted RBP5.13□□□□□ -1.59
GABRB3-216ENST00000628124 A6NN06 94 aa5.12□□□□□ -1.59
GABRB3-216ENST00000628124 PP632Q6XCG6 107 aa5.11□□□□□ -1.59
GABRB3-216ENST00000628124 A0A087X002 238 aa5.1□□□□□ -1.59
GABRB3-216ENST00000628124 A8MU10 97 aa5.1□□□□□ -1.59
GABRB3-216ENST00000628124 C10orf95Q9H7T3 257 aa5.1□□□□□ -1.59
GABRB3-216ENST00000628124 NOTCH2NLQ7Z3S9 236 aa5.07□□□□□ -1.6
GABRB3-216ENST00000628124 STAB2Q8WWQ8 2551 aa5.06□□□□□ -1.6
GABRB3-216ENST00000628124 NBEAL1Q6ZS30 2694 aa5.03□□□□□ -1.6
GABRB3-216ENST00000628124 KRTAP11-1Q8IUC1 163 aa5□□□□□ -1.61
GABRB3-216ENST00000628124 FLNAP21333 2647 aaKnown RBP5□□□□□ -1.61
GABRB3-216ENST00000628124 BPTFQ12830 3046 aa4.99□□□□□ -1.61
GABRB3-216ENST00000628124 Q6ZRN7 208 aaPredicted RBP4.97□□□□□ -1.61
GABRB3-216ENST00000628124 ITPR3Q14573 2671 aa4.96□□□□□ -1.62
GABRB3-216ENST00000628124 KRTAP10-8P60410 259 aa4.94□□□□□ -1.62
GABRB3-216ENST00000628124 CFAP46Q8IYW2 2715 aa4.93□□□□□ -1.62
GABRB3-216ENST00000628124 HELZ2Q9BYK8 2649 aaKnown RBP4.93□□□□□ -1.62
GABRB3-216ENST00000628124 KRTAP13-2Q52LG2 175 aa4.92□□□□□ -1.62
GABRB3-216ENST00000628124 PRO2289Q9P1D8 64 aa4.9□□□□□ -1.63
GABRB3-216ENST00000628124 KRTAP13-1Q8IUC0 172 aa4.88□□□□□ -1.63
GABRB3-216ENST00000628124 P0C880 135 aa4.86□□□□□ -1.63
GABRB3-216ENST00000628124 CENPEQ02224 2701 aa4.85□□□□□ -1.63
GABRB3-216ENST00000628124 TEP1Q99973 2627 aaKnown RBP4.81□□□□□ -1.64
GABRB3-216ENST00000628124 NOTCH1P46531 2555 aa4.8□□□□□ -1.64
GABRB3-216ENST00000628124 AKAP13Q12802 2813 aa4.8□□□□□ -1.64
GABRB3-216ENST00000628124 KRTAP7-1Q8IUC3 87 aa4.79□□□□□ -1.64
GABRB3-216ENST00000628124 UNC79Q9P2D8 2635 aa4.79□□□□□ -1.64
GABRB3-216ENST00000628124 SETXQ7Z333 2677 aaKnown RBP4.78□□□□□ -1.64
GABRB3-216ENST00000628124 KRTAP10-10P60014 251 aa4.75□□□□□ -1.65
GABRB3-216ENST00000628124 CENPFP49454 3210 aa4.75□□□□□ -1.65
GABRB3-216ENST00000628124 XP32Q5T750 250 aa4.74□□□□□ -1.65
GABRB3-216ENST00000628124 KRTAP21-3Q3LHN1 58 aa4.74□□□□□ -1.65
GABRB3-216ENST00000628124 TEX15Q9BXT5 2789 aa4.73□□□□□ -1.65
GABRB3-216ENST00000628124 A0A1B0GVY2 172 aa4.72□□□□□ -1.65
GABRB3-216ENST00000628124 CHD6Q8TD26 2715 aa4.72□□□□□ -1.65
GABRB3-216ENST00000628124 TPRXLQ17RH7 258 aa4.72□□□□□ -1.65
GABRB3-216ENST00000628124 COL6A5A8TX70 2615 aa4.7□□□□□ -1.66
GABRB3-216ENST00000628124 BAHCC1Q9P281 2608 aa4.69□□□□□ -1.66
GABRB3-216ENST00000628124 H0YAA0 97 aa4.69□□□□□ -1.66
GABRB3-216ENST00000628124 IGSF10Q6WRI0 2623 aa4.68□□□□□ -1.66
GABRB3-216ENST00000628124 PRRC2CQ9Y520 2896 aaKnown RBP4.65□□□□□ -1.67
GABRB3-216ENST00000628124 GCN1Q92616 2671 aaKnown RBP4.62□□□□□ -1.67
GABRB3-216ENST00000628124 KRTAP1-4P0C5Y4 121 aa4.61□□□□□ -1.67
GABRB3-216ENST00000628124 NSD1Q96L73 2696 aaPredicted RBP4.61□□□□□ -1.67
GABRB3-216ENST00000628124 MAP1AP78559 2803 aaPredicted RBP4.61□□□□□ -1.67
GABRB3-216ENST00000628124 KRTAP13-3Q3SY46 172 aa4.54□□□□□ -1.68
GABRB3-216ENST00000628124 KRTAP13-4Q3LI77 160 aa4.5□□□□□ -1.69
GABRB3-216ENST00000628124 KRTAP12-2P59991 146 aa4.49□□□□□ -1.69
GABRB3-216ENST00000628124 KMT2BQ9UMN6 2715 aaPredicted RBP4.46□□□□□ -1.7
GABRB3-216ENST00000628124 ZNF292O60281 2723 aa4.46□□□□□ -1.7
GABRB3-216ENST00000628124 NBEAL2Q6ZNJ1 2754 aa4.44□□□□□ -1.7
GABRB3-216ENST00000628124 UBR5O95071 2799 aaPredicted RBP4.42□□□□□ -1.7
GABRB3-216ENST00000628124 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
GABRB3-216ENST00000628124 ITPR2Q14571 2701 aa4.39□□□□□ -1.71
GABRB3-216ENST00000628124 SRCAPQ6ZRS2 3230 aa4.38□□□□□ -1.71
GABRB3-216ENST00000628124 INE1O15225 51 aa4.36□□□□□ -1.71
GABRB3-216ENST00000628124 KRTAP12-1P59990 96 aa4.33□□□□□ -1.72
GABRB3-216ENST00000628124 EP400Q96L91 3159 aa4.31□□□□□ -1.72
GABRB3-216ENST00000628124 CEP350Q5VT06 3117 aa4.3□□□□□ -1.72
GABRB3-216ENST00000628124 APCP25054 2843 aa4.27□□□□□ -1.73
GABRB3-216ENST00000628124 TENM4Q6N022 2769 aa4.26□□□□□ -1.73
GABRB3-216ENST00000628124 HIVEP1P15822 2718 aa4.25□□□□□ -1.73
GABRB3-216ENST00000628124 C5orf42Q9H799 3197 aa4.24□□□□□ -1.73
GABRB3-216ENST00000628124 TENM3Q9P273 2699 aa4.21□□□□□ -1.74
GABRB3-216ENST00000628124 A0A0C4DFX4 3053 aa4.2□□□□□ -1.74
GABRB3-216ENST00000628124 CHD9Q3L8U1 2897 aa4.2□□□□□ -1.74
GABRB3-216ENST00000628124 FRYQ5TBA9 3013 aa4.19□□□□□ -1.74
GABRB3-216ENST00000628124 ITPR1Q14643 2758 aa4.19□□□□□ -1.74
GABRB3-216ENST00000628124 UTP20O75691 2785 aaKnown RBP4.16□□□□□ -1.74
GABRB3-216ENST00000628124 FLNCQ14315 2725 aa4.14□□□□□ -1.75
GABRB3-216ENST00000628124 NIPBLQ6KC79 2804 aaeCLIP4.13□□□□□ -1.75
GABRB3-216ENST00000628124 MGAQ8IWI9 3026 aa4.11□□□□□ -1.75
GABRB3-216ENST00000628124 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
GABRB3-216ENST00000628124 TGP01266 2768 aa4.1□□□□□ -1.75
GABRB3-216ENST00000628124 KRTAP3-1Q9BYR8 98 aa4.09□□□□□ -1.75
GABRB3-216ENST00000628124 CRCT1Q9UGL9 99 aa4.09□□□□□ -1.76
GABRB3-216ENST00000628124 TENM1Q9UKZ4 2725 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms