RNA–Protein interactions for RNA: ENST00000625849.2

TCF4-250, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-250ENST00000625849 GPR179Q6PRD1 2367 aa1.84□□□□□ -2.12
TCF4-250ENST00000625849 CEP250Q9BV73 2442 aa1.83□□□□□ -2.12
TCF4-250ENST00000625849 MAP1BP46821 2468 aaKnown RBP1.83□□□□□ -2.12
TCF4-250ENST00000625849 TRANK1O15050 2925 aa1.83□□□□□ -2.12
TCF4-250ENST00000625849 DNAH14Q0VDD8 3507 aa1.82□□□□□ -2.12
TCF4-250ENST00000625849 A0A1B0GVX0 72 aa1.82□□□□□ -2.12
TCF4-250ENST00000625849 DEFB113Q30KQ7 82 aa1.82□□□□□ -2.12
TCF4-250ENST00000625849 COX6B2Q6YFQ2 88 aa1.82□□□□□ -2.12
TCF4-250ENST00000625849 DEFB105AQ8NG35 78 aa1.82□□□□□ -2.12
TCF4-250ENST00000625849 EP300Q09472 2414 aaPredicted RBP1.82□□□□□ -2.12
TCF4-250ENST00000625849 XIRP2A4UGR9 3374 aa1.81□□□□□ -2.12
TCF4-250ENST00000625849 COL6A6A6NMZ7 2263 aa1.81□□□□□ -2.12
TCF4-250ENST00000625849 H3BNG1 76 aa1.81□□□□□ -2.12
TCF4-250ENST00000625849 LYNX1P0DP58 116 aa1.81□□□□□ -2.12
TCF4-250ENST00000625849 LINC00304Q8N9R0 145 aa1.81□□□□□ -2.12
TCF4-250ENST00000625849 APC2O95996 2303 aa1.81□□□□□ -2.12
TCF4-250ENST00000625849 SPTBN5Q9NRC6 3674 aaKnown RBP1.81□□□□□ -2.12
TCF4-250ENST00000625849 CFAP47Q6ZTR5 3102 aa1.81□□□□□ -2.12
TCF4-250ENST00000625849 USP34Q70CQ2 3546 aa1.8□□□□□ -2.12
TCF4-250ENST00000625849 A0A087WTM6 91 aa1.8□□□□□ -2.12
TCF4-250ENST00000625849 DEFB116Q30KQ4 102 aa1.8□□□□□ -2.12
TCF4-250ENST00000625849 SPINT4Q6UDR6 99 aa1.8□□□□□ -2.12
TCF4-250ENST00000625849 TPRP12270 2363 aaKnown RBP1.8□□□□□ -2.12
TCF4-250ENST00000625849 NBEAQ8NFP9 2946 aa1.8□□□□□ -2.12
TCF4-250ENST00000625849 PIEZO2Q9H5I5 2752 aa1.79□□□□□ -2.12
TCF4-250ENST00000625849 HTTP42858 3142 aa1.79□□□□□ -2.12
TCF4-250ENST00000625849 CNOT1A5YKK6 2376 aaKnown RBP1.78□□□□□ -2.12
TCF4-250ENST00000625849 PCNX1Q96RV3 2341 aa1.78□□□□□ -2.12
TCF4-250ENST00000625849 BRD3OSQ6XYD6 125 aa1.78□□□□□ -2.12
TCF4-250ENST00000625849 KRTAP13-1Q8IUC0 172 aa1.78□□□□□ -2.12
TCF4-250ENST00000625849 Q96NJ1 140 aa1.78□□□□□ -2.12
TCF4-250ENST00000625849 RP1L1Q8IWN7 2480 aaPredicted RBP1.78□□□□□ -2.12
TCF4-250ENST00000625849 ACACAQ13085 2346 aa1.78□□□□□ -2.13
TCF4-250ENST00000625849 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.78□□□□□ -2.13
TCF4-250ENST00000625849 A0A0G2JQZ4 141 aa1.77□□□□□ -2.13
TCF4-250ENST00000625849 OTOGLQ3ZCN5 2332 aa1.77□□□□□ -2.13
TCF4-250ENST00000625849 KALRNO60229 2985 aa1.77□□□□□ -2.13
TCF4-250ENST00000625849 CHD7Q9P2D1 2997 aa1.77□□□□□ -2.13
TCF4-250ENST00000625849 DCHS1Q96JQ0 3298 aa1.76□□□□□ -2.13
TCF4-250ENST00000625849 FRYQ5TBA9 3013 aa1.76□□□□□ -2.13
TCF4-250ENST00000625849 ROS1P08922 2347 aa1.76□□□□□ -2.13
TCF4-250ENST00000625849 PTPRZ1P23471 2315 aaPredicted RBP1.76□□□□□ -2.13
TCF4-250ENST00000625849 NBDYA0A0U1RRE5 68 aa1.76□□□□□ -2.13
TCF4-250ENST00000625849 LINC01556Q5JQF7 62 aa1.76□□□□□ -2.13
TCF4-250ENST00000625849 AKAP6Q13023 2319 aa1.75□□□□□ -2.13
TCF4-250ENST00000625849 ANKHD1Q8IWZ3 2542 aaKnown RBP1.75□□□□□ -2.13
TCF4-250ENST00000625849 C5orf42Q9H799 3197 aa1.75□□□□□ -2.13
TCF4-250ENST00000625849 ABCA2Q9BZC7 2435 aa1.75□□□□□ -2.13
TCF4-250ENST00000625849 LAMA2P24043 3122 aaKnown RBP1.75□□□□□ -2.13
TCF4-250ENST00000625849 A0A1W2PNN7 141 aa1.75□□□□□ -2.13
TCF4-250ENST00000625849 H0YAA0 97 aa1.75□□□□□ -2.13
TCF4-250ENST00000625849 SSBP3-AS1Q7Z2R9 100 aa1.75□□□□□ -2.13
TCF4-250ENST00000625849 PSORS1C2Q9UIG4 136 aa1.75□□□□□ -2.13
TCF4-250ENST00000625849 FRYLO94915 3013 aa1.74□□□□□ -2.13
TCF4-250ENST00000625849 BAHCC1Q9P281 2608 aa1.74□□□□□ -2.13
TCF4-250ENST00000625849 NCOR1O75376 2440 aa1.74□□□□□ -2.13
TCF4-250ENST00000625849 A0A1B0GU33 70 aa1.74□□□□□ -2.13
TCF4-250ENST00000625849 DEFB130BP0DP73 79 aa1.74□□□□□ -2.13
TCF4-250ENST00000625849 DEFB130AP0DP74 79 aa1.74□□□□□ -2.13
TCF4-250ENST00000625849 CHD9Q3L8U1 2897 aa1.74□□□□□ -2.13
TCF4-250ENST00000625849 BRCA2P51587 3418 aa1.73□□□□□ -2.13
TCF4-250ENST00000625849 TRIOO75962 3097 aa1.73□□□□□ -2.13
TCF4-250ENST00000625849 TENM2Q9NT68 2774 aa1.73□□□□□ -2.13
TCF4-250ENST00000625849 PIEZO1Q92508 2521 aa1.73□□□□□ -2.13
TCF4-250ENST00000625849 WDFY4Q6ZS81 3184 aa1.73□□□□□ -2.13
TCF4-250ENST00000625849 A0A096LPF7 62 aa1.73□□□□□ -2.13
TCF4-250ENST00000625849 SPART-AS1P0CW21 52 aa1.73□□□□□ -2.13
TCF4-250ENST00000625849 DEFB136Q30KP8 78 aa1.73□□□□□ -2.13
TCF4-250ENST00000625849 H1FX-AS1Q4G0G2 97 aa1.73□□□□□ -2.13
TCF4-250ENST00000625849 Q6ZSA8 131 aa1.73□□□□□ -2.13
TCF4-250ENST00000625849 CIRBP-AS1Q8TBR5 109 aa1.73□□□□□ -2.13
TCF4-250ENST00000625849 CRIPTQ9P021 101 aa1.73□□□□□ -2.13
TCF4-250ENST00000625849 PRUNE2Q8WUY3 3088 aa1.73□□□□□ -2.13
TCF4-250ENST00000625849 FBN1P35555 2871 aaKnown RBP1.73□□□□□ -2.13
TCF4-250ENST00000625849 CHD8Q9HCK8 2581 aa1.72□□□□□ -2.13
TCF4-250ENST00000625849 RPL37P61927 97 aaKnown RBP1.72□□□□□ -2.13
TCF4-250ENST00000625849 WDFY3Q8IZQ1 3526 aa1.72□□□□□ -2.13
TCF4-250ENST00000625849 CACNA1HO95180 2353 aa1.72□□□□□ -2.13
TCF4-250ENST00000625849 LAMA3Q16787 3333 aa1.72□□□□□ -2.13
TCF4-250ENST00000625849 AKAP13Q12802 2813 aa1.72□□□□□ -2.13
TCF4-250ENST00000625849 ANKRD17O75179 2603 aaKnown RBP1.71□□□□□ -2.13
TCF4-250ENST00000625849 SPTA1P02549 2419 aa1.71□□□□□ -2.14
TCF4-250ENST00000625849 DMDP11532 3685 aa1.71□□□□□ -2.14
TCF4-250ENST00000625849 C10orf99Q6UWK7 81 aa1.71□□□□□ -2.14
TCF4-250ENST00000625849 REV3LO60673 3130 aa1.71□□□□□ -2.14
TCF4-250ENST00000625849 SPEGQ15772 3267 aa1.71□□□□□ -2.14
TCF4-250ENST00000625849 CELSR2Q9HCU4 2923 aa1.71□□□□□ -2.14
TCF4-250ENST00000625849 LAMA1P25391 3075 aa1.71□□□□□ -2.14
TCF4-250ENST00000625849 NCOR2Q9Y618 2525 aa1.71□□□□□ -2.14
TCF4-250ENST00000625849 MAP1AP78559 2803 aaPredicted RBP1.71□□□□□ -2.14
TCF4-250ENST00000625849 SPTBN4Q9H254 2564 aa1.7□□□□□ -2.14
TCF4-250ENST00000625849 K7EIL1 84 aa1.7□□□□□ -2.14
TCF4-250ENST00000625849 DEFB124Q8NES8 71 aa1.7□□□□□ -2.14
TCF4-250ENST00000625849 VCANP13611 3396 aa1.7□□□□□ -2.14
TCF4-250ENST00000625849 FREM2Q5SZK8 3169 aa1.69□□□□□ -2.14
TCF4-250ENST00000625849 DSPP15924 2871 aaKnown RBP1.69□□□□□ -2.14
TCF4-250ENST00000625849 NBASA2RRP1 2371 aa1.69□□□□□ -2.14
TCF4-250ENST00000625849 PRLHP81277 87 aa1.69□□□□□ -2.14
TCF4-250ENST00000625849 BOD1L1Q8NFC6 3051 aa1.69□□□□□ -2.14
TCF4-250ENST00000625849 IGF2RP11717 2491 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms