RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 CSMD1Q96PZ7 3565 aa3.68□□□□□ -1.82
ERCC6-213ENST00000624341 NBDYA0A0U1RRE5 68 aa3.68□□□□□ -1.82
ERCC6-213ENST00000624341 A0A1W2PNM2 257 aa3.68□□□□□ -1.82
ERCC6-213ENST00000624341 LINC01600Q96MT4 127 aa3.68□□□□□ -1.82
ERCC6-213ENST00000624341 CELSR1Q9NYQ6 3014 aa3.68□□□□□ -1.82
ERCC6-213ENST00000624341 RTL8CO15255 209 aa3.68□□□□□ -1.82
ERCC6-213ENST00000624341 RBM12B-AS1Q9P1G2 102 aa3.68□□□□□ -1.82
ERCC6-213ENST00000624341 FAM104AQ969W3 186 aa3.67□□□□□ -1.82
ERCC6-213ENST00000624341 LINC00612Q8N6U2 182 aa3.67□□□□□ -1.82
ERCC6-213ENST00000624341 A0A096LNT2 108 aa3.67□□□□□ -1.82
ERCC6-213ENST00000624341 C8orf17Q9NRJ1 99 aa3.67□□□□□ -1.82
ERCC6-213ENST00000624341 CR1P17927 2039 aa3.66□□□□□ -1.82
ERCC6-213ENST00000624341 SPINT4Q6UDR6 99 aa3.66□□□□□ -1.82
ERCC6-213ENST00000624341 KRTAP1-1Q07627 177 aa3.66□□□□□ -1.82
ERCC6-213ENST00000624341 NBPF19A0A087WUL8 3843 aa3.66□□□□□ -1.82
ERCC6-213ENST00000624341 Q96NJ1 140 aa3.66□□□□□ -1.82
ERCC6-213ENST00000624341 UQCR11O14957 56 aa3.65□□□□□ -1.82
ERCC6-213ENST00000624341 TACC2O95359 2948 aa3.65□□□□□ -1.82
ERCC6-213ENST00000624341 SETXQ7Z333 2677 aaKnown RBP3.65□□□□□ -1.83
ERCC6-213ENST00000624341 DSCR10P59022 87 aa3.65□□□□□ -1.83
ERCC6-213ENST00000624341 CASC10Q5T4H9 136 aa3.65□□□□□ -1.83
ERCC6-213ENST00000624341 CYSTM1Q9H1C7 97 aa3.65□□□□□ -1.83
ERCC6-213ENST00000624341 ANAPC11Q9NYG5 84 aa3.65□□□□□ -1.83
ERCC6-213ENST00000624341 KRTAP10-3P60369 221 aa3.64□□□□□ -1.83
ERCC6-213ENST00000624341 AKAP9Q99996 3911 aa3.64□□□□□ -1.83
ERCC6-213ENST00000624341 CD164Q04900 197 aa3.64□□□□□ -1.83
ERCC6-213ENST00000624341 OCR1Q9BZK8 76 aa3.64□□□□□ -1.83
ERCC6-213ENST00000624341 A0A1B0GVX0 72 aa3.64□□□□□ -1.83
ERCC6-213ENST00000624341 KRTAP10-11P60412 298 aa3.63□□□□□ -1.83
ERCC6-213ENST00000624341 IGLV5-48A0A075B6I7 105 aa3.63□□□□□ -1.83
ERCC6-213ENST00000624341 TLX1NBP0CAT3 122 aa3.63□□□□□ -1.83
ERCC6-213ENST00000624341 MIR22HGQ0VDD5 57 aa3.63□□□□□ -1.83
ERCC6-213ENST00000624341 SSBP3-AS1Q7Z2R9 100 aa3.63□□□□□ -1.83
ERCC6-213ENST00000624341 KTN1-AS1Q86SY8 53 aa3.62□□□□□ -1.83
ERCC6-213ENST00000624341 CRIPTQ9P021 101 aa3.62□□□□□ -1.83
ERCC6-213ENST00000624341 IGLV5-37A0A075B6J1 123 aa3.62□□□□□ -1.83
ERCC6-213ENST00000624341 PDZD2O15018 2839 aa3.62□□□□□ -1.83
ERCC6-213ENST00000624341 APLNQ9ULZ1 77 aa3.62□□□□□ -1.83
ERCC6-213ENST00000624341 PLA2G2DQ9UNK4 145 aa3.62□□□□□ -1.83
ERCC6-213ENST00000624341 UNC79Q9P2D8 2635 aa3.62□□□□□ -1.83
ERCC6-213ENST00000624341 NOTCH1P46531 2555 aa3.62□□□□□ -1.83
ERCC6-213ENST00000624341 SVEP1Q4LDE5 3571 aa3.61□□□□□ -1.83
ERCC6-213ENST00000624341 ZNF861PO60384 105 aa3.6□□□□□ -1.83
ERCC6-213ENST00000624341 C9orf163Q8N9P6 203 aa3.6□□□□□ -1.83
ERCC6-213ENST00000624341 Q5XG85 94 aa3.6□□□□□ -1.83
ERCC6-213ENST00000624341 PRR26Q8N8Z3 221 aa3.6□□□□□ -1.83
ERCC6-213ENST00000624341 SPANXA2-OT1Q8N9U9 137 aa3.6□□□□□ -1.83
ERCC6-213ENST00000624341 WIPF1O43516 503 aa3.6□□□□□ -1.83
ERCC6-213ENST00000624341 K7EIL1 84 aa3.6□□□□□ -1.83
ERCC6-213ENST00000624341 STAB1Q9NY15 2570 aa3.59□□□□□ -1.83
ERCC6-213ENST00000624341 Q8NDZ9 215 aa3.59□□□□□ -1.83
ERCC6-213ENST00000624341 LINC01554Q52M75 96 aa3.59□□□□□ -1.83
ERCC6-213ENST00000624341 LCA10Q71F78 164 aa3.59□□□□□ -1.83
ERCC6-213ENST00000624341 FAM229BQ4G0N7 80 aa3.59□□□□□ -1.84
ERCC6-213ENST00000624341 TEX15Q9BXT5 2789 aa3.58□□□□□ -1.84
ERCC6-213ENST00000624341 Q1T7F1 81 aa3.58□□□□□ -1.84
ERCC6-213ENST00000624341 FP248Q71RG6 208 aaPredicted RBP3.58□□□□□ -1.84
ERCC6-213ENST00000624341 LINC00304Q8N9R0 145 aa3.58□□□□□ -1.84
ERCC6-213ENST00000624341 CDC42SE1Q9NRR8 79 aa3.58□□□□□ -1.84
ERCC6-213ENST00000624341 NBEAL2Q6ZNJ1 2754 aa3.58□□□□□ -1.84
ERCC6-213ENST00000624341 SPRR4Q96PI1 79 aa3.57□□□□□ -1.84
ERCC6-213ENST00000624341 PSORS1C2Q9UIG4 136 aa3.57□□□□□ -1.84
ERCC6-213ENST00000624341 LINC00483Q53H64 154 aa3.57□□□□□ -1.84
ERCC6-213ENST00000624341 FLNCQ14315 2725 aa3.57□□□□□ -1.84
ERCC6-213ENST00000624341 TEP1Q99973 2627 aaKnown RBP3.57□□□□□ -1.84
ERCC6-213ENST00000624341 A0A087WTM6 91 aa3.57□□□□□ -1.84
ERCC6-213ENST00000624341 CELSR2Q9HCU4 2923 aa3.56□□□□□ -1.84
ERCC6-213ENST00000624341 C9orf92A6NGG3 77 aa3.56□□□□□ -1.84
ERCC6-213ENST00000624341 APCP25054 2843 aa3.56□□□□□ -1.84
ERCC6-213ENST00000624341 Q6ZSA8 131 aa3.55□□□□□ -1.84
ERCC6-213ENST00000624341 Q8N1X5 172 aa3.55□□□□□ -1.84
ERCC6-213ENST00000624341 FBN2P35556 2912 aa3.55□□□□□ -1.84
ERCC6-213ENST00000624341 LUZP6Q538Z0 58 aa3.55□□□□□ -1.84
ERCC6-213ENST00000624341 OTOGQ6ZRI0 2925 aa3.55□□□□□ -1.84
ERCC6-213ENST00000624341 OXTP01178 125 aa3.55□□□□□ -1.84
ERCC6-213ENST00000624341 CNBPP62633 177 aaKnown RBP3.55□□□□□ -1.84
ERCC6-213ENST00000624341 CAMK2N1Q7Z7J9 78 aa3.55□□□□□ -1.84
ERCC6-213ENST00000624341 COL6A5A8TX70 2615 aa3.55□□□□□ -1.84
ERCC6-213ENST00000624341 IGLV7-43P04211 117 aa3.54□□□□□ -1.84
ERCC6-213ENST00000624341 SMR3BP02814 79 aaPredicted RBP3.54□□□□□ -1.84
ERCC6-213ENST00000624341 UTP20O75691 2785 aaKnown RBP3.54□□□□□ -1.84
ERCC6-213ENST00000624341 IGLV7-46A0A075B6I9 117 aa3.53□□□□□ -1.84
ERCC6-213ENST00000624341 Q8N9P0 234 aaPredicted RBP3.53□□□□□ -1.84
ERCC6-213ENST00000624341 VPS13CQ709C8 3753 aa3.53□□□□□ -1.84
ERCC6-213ENST00000624341 FLG2Q5D862 2391 aaPredicted RBP3.52□□□□□ -1.85
ERCC6-213ENST00000624341 A0A0D9SG42 100 aa3.51□□□□□ -1.85
ERCC6-213ENST00000624341 ITPR2Q14571 2701 aa3.51□□□□□ -1.85
ERCC6-213ENST00000624341 Q75L30 129 aa3.51□□□□□ -1.85
ERCC6-213ENST00000624341 COL12A1Q99715 3063 aa3.51□□□□□ -1.85
ERCC6-213ENST00000624341 HRES1P13985 223 aa3.5□□□□□ -1.85
ERCC6-213ENST00000624341 ANK3Q12955 4377 aaKnown RBP3.5□□□□□ -1.85
ERCC6-213ENST00000624341 HIVEP1P15822 2718 aa3.5□□□□□ -1.85
ERCC6-213ENST00000624341 MMP24-AS1A0A0U1RRL7 71 aa3.5□□□□□ -1.85
ERCC6-213ENST00000624341 CSMD2Q7Z408 3487 aa3.5□□□□□ -1.85
ERCC6-213ENST00000624341 PRAC1Q96KF2 57 aa3.5□□□□□ -1.85
ERCC6-213ENST00000624341 Q5VV11 94 aa3.49□□□□□ -1.85
ERCC6-213ENST00000624341 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.49□□□□□ -1.85
ERCC6-213ENST00000624341 SPRR1AP35321 89 aa3.49□□□□□ -1.85
ERCC6-213ENST00000624341 CRYBG3Q68DQ2 2970 aa3.49□□□□□ -1.85
ERCC6-213ENST00000624341 LINC01558Q9Y6Z2 57 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms