RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 TEX15Q9BXT5 2789 aa6.51□□□□□ -1.37
COL25A1-209ENST00000622134 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.5□□□□□ -1.37
COL25A1-209ENST00000622134 MMP24-AS1A0A0U1RRL7 71 aa6.49□□□□□ -1.37
COL25A1-209ENST00000622134 Q5VSD8 79 aa6.48□□□□□ -1.37
COL25A1-209ENST00000622134 UTRNP46939 3433 aa6.48□□□□□ -1.37
COL25A1-209ENST00000622134 SEC61BP60468 96 aaKnown RBP6.47□□□□□ -1.37
COL25A1-209ENST00000622134 GCN1Q92616 2671 aaKnown RBP6.47□□□□□ -1.37
COL25A1-209ENST00000622134 A0A0C4DFX4 3053 aa6.47□□□□□ -1.37
COL25A1-209ENST00000622134 CHD9Q3L8U1 2897 aa6.47□□□□□ -1.37
COL25A1-209ENST00000622134 ANAPC11Q9NYG5 84 aa6.46□□□□□ -1.37
COL25A1-209ENST00000622134 SPRR1AP35321 89 aa6.46□□□□□ -1.38
COL25A1-209ENST00000622134 CHD6Q8TD26 2715 aa6.45□□□□□ -1.38
COL25A1-209ENST00000622134 DMAC1Q96GE9 116 aa6.44□□□□□ -1.38
COL25A1-209ENST00000622134 CHD7Q9P2D1 2997 aa6.44□□□□□ -1.38
COL25A1-209ENST00000622134 Q6ZR54 194 aa6.42□□□□□ -1.38
COL25A1-209ENST00000622134 LINC00472Q9H8W2 130 aa6.42□□□□□ -1.38
COL25A1-209ENST00000622134 HTTP42858 3142 aa6.4□□□□□ -1.38
COL25A1-209ENST00000622134 DNAH12Q6ZR08 3092 aa6.4□□□□□ -1.38
COL25A1-209ENST00000622134 A0A1B0GU33 70 aa6.39□□□□□ -1.39
COL25A1-209ENST00000622134 TRANK1O15050 2925 aa6.39□□□□□ -1.39
COL25A1-209ENST00000622134 M0R2T5 61 aa6.39□□□□□ -1.39
COL25A1-209ENST00000622134 CEP350Q5VT06 3117 aa6.38□□□□□ -1.39
COL25A1-209ENST00000622134 KRTAP29-1A8MX34 341 aaPredicted RBP6.37□□□□□ -1.39
COL25A1-209ENST00000622134 KRTAP10-1P60331 282 aa6.37□□□□□ -1.39
COL25A1-209ENST00000622134 SPRR1BP22528 89 aa6.37□□□□□ -1.39
COL25A1-209ENST00000622134 NOTCH1P46531 2555 aa6.36□□□□□ -1.39
COL25A1-209ENST00000622134 A0A087X002 238 aa6.36□□□□□ -1.39
COL25A1-209ENST00000622134 SPATA8Q6RVD6 105 aa6.35□□□□□ -1.39
COL25A1-209ENST00000622134 KRTAP1-5Q9BYS1 174 aa6.35□□□□□ -1.39
COL25A1-209ENST00000622134 LUZP6Q538Z0 58 aa6.33□□□□□ -1.4
COL25A1-209ENST00000622134 NBEAL1Q6ZS30 2694 aa6.33□□□□□ -1.4
COL25A1-209ENST00000622134 Q8N1X5 172 aa6.32□□□□□ -1.4
COL25A1-209ENST00000622134 KMT2BQ9UMN6 2715 aaPredicted RBP6.32□□□□□ -1.4
COL25A1-209ENST00000622134 KRTAP10-2P60368 255 aa6.31□□□□□ -1.4
COL25A1-209ENST00000622134 NSD1Q96L73 2696 aaPredicted RBP6.31□□□□□ -1.4
COL25A1-209ENST00000622134 PCNTO95613 3336 aa6.3□□□□□ -1.4
COL25A1-209ENST00000622134 ITPR2Q14571 2701 aa6.28□□□□□ -1.4
COL25A1-209ENST00000622134 A8MU10 97 aa6.28□□□□□ -1.4
COL25A1-209ENST00000622134 AKAP13Q12802 2813 aa6.28□□□□□ -1.4
COL25A1-209ENST00000622134 KRTAP26-1Q6PEX3 210 aa6.28□□□□□ -1.4
COL25A1-209ENST00000622134 Q5W150 140 aa6.28□□□□□ -1.4
COL25A1-209ENST00000622134 A0A0A0MQY5 61 aa6.26□□□□□ -1.41
COL25A1-209ENST00000622134 DSPP15924 2871 aaKnown RBP6.26□□□□□ -1.41
COL25A1-209ENST00000622134 A0A0D9SG42 100 aa6.25□□□□□ -1.41
COL25A1-209ENST00000622134 KRTAP4-16G5E9R7 235 aaPredicted RBP6.25□□□□□ -1.41
COL25A1-209ENST00000622134 MAP1AP78559 2803 aaPredicted RBP6.25□□□□□ -1.41
COL25A1-209ENST00000622134 KRTAP16-1A8MUX0 517 aa6.23□□□□□ -1.41
COL25A1-209ENST00000622134 MGAQ8IWI9 3026 aa6.22□□□□□ -1.41
COL25A1-209ENST00000622134 UBR5O95071 2799 aaPredicted RBP6.22□□□□□ -1.41
COL25A1-209ENST00000622134 ROMO1P60602 79 aa6.22□□□□□ -1.41
COL25A1-209ENST00000622134 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
COL25A1-209ENST00000622134 LINC00483Q53H64 154 aa6.2□□□□□ -1.42
COL25A1-209ENST00000622134 ADM2Q7Z4H4 148 aa6.2□□□□□ -1.42
COL25A1-209ENST00000622134 RPS29P62273 56 aaKnown RBP6.19□□□□□ -1.42
COL25A1-209ENST00000622134 STAB2Q8WWQ8 2551 aa6.18□□□□□ -1.42
COL25A1-209ENST00000622134 Q6ZRN7 208 aaPredicted RBP6.16□□□□□ -1.42
COL25A1-209ENST00000622134 RPL37P61927 97 aaKnown RBP6.15□□□□□ -1.42
COL25A1-209ENST00000622134 HIVEP1P15822 2718 aa6.15□□□□□ -1.43
COL25A1-209ENST00000622134 H1FX-AS1Q4G0G2 97 aa6.14□□□□□ -1.43
COL25A1-209ENST00000622134 RANBP2P49792 3224 aaKnown RBP6.14□□□□□ -1.43
COL25A1-209ENST00000622134 S4R3F8 94 aa6.13□□□□□ -1.43
COL25A1-209ENST00000622134 CAMK2N1Q7Z7J9 78 aa6.13□□□□□ -1.43
COL25A1-209ENST00000622134 C5orf42Q9H799 3197 aa6.11□□□□□ -1.43
COL25A1-209ENST00000622134 DMBT1Q9UGM3 2413 aaPredicted RBP6.11□□□□□ -1.43
COL25A1-209ENST00000622134 FLNCQ14315 2725 aa6.1□□□□□ -1.43
COL25A1-209ENST00000622134 TENM4Q6N022 2769 aa6.09□□□□□ -1.44
COL25A1-209ENST00000622134 FLG2Q5D862 2391 aaPredicted RBP6.07□□□□□ -1.44
COL25A1-209ENST00000622134 ITPR1Q14643 2758 aa6.06□□□□□ -1.44
COL25A1-209ENST00000622134 CFAP54Q96N23 3096 aa6.06□□□□□ -1.44
COL25A1-209ENST00000622134 PANO1I0J062 215 aa6.05□□□□□ -1.44
COL25A1-209ENST00000622134 TNRC18O15417 2968 aaPredicted RBP6.02□□□□□ -1.45
COL25A1-209ENST00000622134 R4GN34 69 aa6.02□□□□□ -1.45
COL25A1-209ENST00000622134 MKI67P46013 3256 aaKnown RBP6.01□□□□□ -1.45
COL25A1-209ENST00000622134 NDUFAF8A1L188 74 aa6.01□□□□□ -1.45
COL25A1-209ENST00000622134 NOTCH2NLQ7Z3S9 236 aa5.97□□□□□ -1.45
COL25A1-209ENST00000622134 LAMA3Q16787 3333 aa5.96□□□□□ -1.45
COL25A1-209ENST00000622134 A8MUU9 505 aa5.96□□□□□ -1.46
COL25A1-209ENST00000622134 BRCA2P51587 3418 aa5.94□□□□□ -1.46
COL25A1-209ENST00000622134 LAMA2P24043 3122 aaKnown RBP5.94□□□□□ -1.46
COL25A1-209ENST00000622134 APCP25054 2843 aa5.93□□□□□ -1.46
COL25A1-209ENST00000622134 KRTAP11-1Q8IUC1 163 aa5.93□□□□□ -1.46
COL25A1-209ENST00000622134 PLAC4Q8WY50 150 aa5.92□□□□□ -1.46
COL25A1-209ENST00000622134 NIPBLQ6KC79 2804 aaeCLIP5.92□□□□□ -1.46
COL25A1-209ENST00000622134 KRTAP7-1Q8IUC3 87 aa5.92□□□□□ -1.46
COL25A1-209ENST00000622134 WDFY4Q6ZS81 3184 aa5.91□□□□□ -1.46
COL25A1-209ENST00000622134 PRUNE2Q8WUY3 3088 aa5.9□□□□□ -1.46
COL25A1-209ENST00000622134 NBEAL2Q6ZNJ1 2754 aa5.9□□□□□ -1.47
COL25A1-209ENST00000622134 KRTAP13-1Q8IUC0 172 aa5.89□□□□□ -1.47
COL25A1-209ENST00000622134 UTP20O75691 2785 aaKnown RBP5.88□□□□□ -1.47
COL25A1-209ENST00000622134 C20orf166-AS1Q96NR2 134 aa5.87□□□□□ -1.47
COL25A1-209ENST00000622134 KRTAP13-2Q52LG2 175 aa5.85□□□□□ -1.47
COL25A1-209ENST00000622134 FRYQ5TBA9 3013 aa5.85□□□□□ -1.47
COL25A1-209ENST00000622134 M0QZ58 72 aa5.84□□□□□ -1.47
COL25A1-209ENST00000622134 NBEAQ8NFP9 2946 aa5.84□□□□□ -1.47
COL25A1-209ENST00000622134 UNC80Q8N2C7 3258 aa5.8□□□□□ -1.48
COL25A1-209ENST00000622134 TRIOO75962 3097 aa5.8□□□□□ -1.48
COL25A1-209ENST00000622134 TACC2O95359 2948 aa5.77□□□□□ -1.49
COL25A1-209ENST00000622134 FRYLO94915 3013 aa5.75□□□□□ -1.49
COL25A1-209ENST00000622134 COL12A1Q99715 3063 aa5.74□□□□□ -1.49
COL25A1-209ENST00000622134 TPRXLQ17RH7 258 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms