RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 ST20-AS1Q8NBB2 130 aa10.32□□□□□ -0.76
SCAMP4-213ENST00000621748 LAMTOR3Q9UHA4 124 aa10.31□□□□□ -0.76
SCAMP4-213ENST00000621748 C9orf118A6NHY6 69 aa10.3□□□□□ -0.76
SCAMP4-213ENST00000621748 H3BUT2 72 aa10.3□□□□□ -0.76
SCAMP4-213ENST00000621748 LINC00483Q53H64 154 aa10.3□□□□□ -0.76
SCAMP4-213ENST00000621748 Q6ZQY7 126 aa10.3□□□□□ -0.76
SCAMP4-213ENST00000621748 CLEC2BQ92478 149 aa10.3□□□□□ -0.76
SCAMP4-213ENST00000621748 NAA38Q9BRA0 125 aaKnown RBP10.3□□□□□ -0.76
SCAMP4-213ENST00000621748 SPAG11AQ6PDA7 123 aa10.29□□□□□ -0.76
SCAMP4-213ENST00000621748 H3BQ85 93 aa10.28□□□□□ -0.76
SCAMP4-213ENST00000621748 ATXN8Q156A1 80 aa10.28□□□□□ -0.76
SCAMP4-213ENST00000621748 Q8NBF4 154 aa10.28□□□□□ -0.76
SCAMP4-213ENST00000621748 F8WEM9 126 aa10.27□□□□□ -0.77
SCAMP4-213ENST00000621748 FABP2P12104 132 aa10.27□□□□□ -0.77
SCAMP4-213ENST00000621748 IGLV7-46A0A075B6I9 117 aa10.26□□□□□ -0.77
SCAMP4-213ENST00000621748 TRBV20-1A0A075B6N2 111 aa10.26□□□□□ -0.77
SCAMP4-213ENST00000621748 TAX1BP3O14907 124 aa10.26□□□□□ -0.77
SCAMP4-213ENST00000621748 C4orf48Q5BLP8 95 aa10.26□□□□□ -0.77
SCAMP4-213ENST00000621748 PPDPFLQ8WWR9 84 aa10.26□□□□□ -0.77
SCAMP4-213ENST00000621748 FAM218AQ96MZ4 157 aa10.26□□□□□ -0.77
SCAMP4-213ENST00000621748 IGLV9-49A0A0B4J1Y8 123 aa10.25□□□□□ -0.77
SCAMP4-213ENST00000621748 C9orf153Q5TBE3 101 aa10.25□□□□□ -0.77
SCAMP4-213ENST00000621748 MUC17Q685J3 4493 aa10.25□□□□□ -0.77
SCAMP4-213ENST00000621748 IGLV5-48A0A075B6I7 105 aa10.24□□□□□ -0.77
SCAMP4-213ENST00000621748 TRACP01848 142 aa10.24□□□□□ -0.77
SCAMP4-213ENST00000621748 SPRR1BP22528 89 aa10.24□□□□□ -0.77
SCAMP4-213ENST00000621748 ORMDL1Q9P0S3 153 aa10.24□□□□□ -0.77
SCAMP4-213ENST00000621748 A0A1W2PPM0 123 aa10.23□□□□□ -0.77
SCAMP4-213ENST00000621748 LST1O00453 97 aa10.23□□□□□ -0.77
SCAMP4-213ENST00000621748 MOBPQ13875 183 aa10.22□□□□□ -0.77
SCAMP4-213ENST00000621748 TPRXLQ17RH7 258 aa10.22□□□□□ -0.77
SCAMP4-213ENST00000621748 Q8N377 158 aa10.21□□□□□ -0.77
SCAMP4-213ENST00000621748 TMEM256-PLSCR3K7ERE1 68 aa10.2□□□□□ -0.78
SCAMP4-213ENST00000621748 TCL1BO95988 128 aa10.19□□□□□ -0.78
SCAMP4-213ENST00000621748 SPINK1P00995 79 aa10.19□□□□□ -0.78
SCAMP4-213ENST00000621748 SSBP3-AS1Q7Z2R9 100 aa10.19□□□□□ -0.78
SCAMP4-213ENST00000621748 CDIP1Q9H305 208 aa10.19□□□□□ -0.78
SCAMP4-213ENST00000621748 LINC01547P58512 204 aaPredicted RBP10.17□□□□□ -0.78
SCAMP4-213ENST00000621748 FP248Q71RG6 208 aaPredicted RBP10.16□□□□□ -0.78
SCAMP4-213ENST00000621748 SPCS1Q9Y6A9 102 aa10.16□□□□□ -0.78
SCAMP4-213ENST00000621748 BAALC-AS2P0C853 105 aa10.14□□□□□ -0.79
SCAMP4-213ENST00000621748 NDUFV3P56181 108 aaKnown RBP10.14□□□□□ -0.79
SCAMP4-213ENST00000621748 GTF2H5Q6ZYL4 71 aa10.12□□□□□ -0.79
SCAMP4-213ENST00000621748 SMIM29Q86T20 159 aa10.12□□□□□ -0.79
SCAMP4-213ENST00000621748 C9JAW5 83 aa10.11□□□□□ -0.79
SCAMP4-213ENST00000621748 RPS29P62273 56 aaKnown RBP10.1□□□□□ -0.79
SCAMP4-213ENST00000621748 UBE2V1Q13404 147 aa10.1□□□□□ -0.79
SCAMP4-213ENST00000621748 Q6JHZ5 121 aa10.1□□□□□ -0.79
SCAMP4-213ENST00000621748 H3BMG7 143 aa10.09□□□□□ -0.79
SCAMP4-213ENST00000621748 KRTAP13-3Q3SY46 172 aa10.09□□□□□ -0.79
SCAMP4-213ENST00000621748 ANKRD29Q8N6D5 301 aa10.09□□□□□ -0.79
SCAMP4-213ENST00000621748 FAT4Q6V0I7 4981 aa10.09□□□□□ -0.79
SCAMP4-213ENST00000621748 A0A0U1RQV1 116 aa10.05□□□□□ -0.8
SCAMP4-213ENST00000621748 K7EP34 96 aa10.05□□□□□ -0.8
SCAMP4-213ENST00000621748 A0A1B0GV72 72 aa10.04□□□□□ -0.8
SCAMP4-213ENST00000621748 H3BT86 120 aa10.04□□□□□ -0.8
SCAMP4-213ENST00000621748 IGLV8-61A0A075B6I0 122 aa10.03□□□□□ -0.8
SCAMP4-213ENST00000621748 JMJD7-PLA2G4BH0Y9G9 81 aa10.03□□□□□ -0.8
SCAMP4-213ENST00000621748 HRCT1Q6UXD1 115 aa10.03□□□□□ -0.8
SCAMP4-213ENST00000621748 DSCR8Q96T75 97 aa10.03□□□□□ -0.8
SCAMP4-213ENST00000621748 RBM3P98179 157 aaKnown RBP10.02□□□□□ -0.81
SCAMP4-213ENST00000621748 CD164Q04900 197 aa10.01□□□□□ -0.81
SCAMP4-213ENST00000621748 LIMD2Q9BT23 127 aa10.01□□□□□ -0.81
SCAMP4-213ENST00000621748 IGFL1Q6UW32 110 aa9.99□□□□□ -0.81
SCAMP4-213ENST00000621748 MTURNQ8N3F0 131 aa9.98□□□□□ -0.81
SCAMP4-213ENST00000621748 ASB16-AS1Q495Z4 193 aa9.95□□□□□ -0.82
SCAMP4-213ENST00000621748 PDE6GP18545 87 aa9.94□□□□□ -0.82
SCAMP4-213ENST00000621748 C21orf62-AS1Q17RA5 79 aa9.94□□□□□ -0.82
SCAMP4-213ENST00000621748 TEN1Q86WV5 123 aa9.94□□□□□ -0.82
SCAMP4-213ENST00000621748 VPS25Q9BRG1 176 aa9.94□□□□□ -0.82
SCAMP4-213ENST00000621748 A0A0G2JQZ4 141 aa9.93□□□□□ -0.82
SCAMP4-213ENST00000621748 F8W1H4 67 aa9.93□□□□□ -0.82
SCAMP4-213ENST00000621748 LCE2AQ5TA79 106 aaPredicted RBP9.93□□□□□ -0.82
SCAMP4-213ENST00000621748 CCKP06307 115 aa9.91□□□□□ -0.82
SCAMP4-213ENST00000621748 SS18L2Q9UHA2 77 aa9.91□□□□□ -0.82
SCAMP4-213ENST00000621748 TRBV7-7A0A0K0K1E9 115 aa9.9□□□□□ -0.82
SCAMP4-213ENST00000621748 KRTAP4-1Q9BYQ7 146 aa9.9□□□□□ -0.82
SCAMP4-213ENST00000621748 SEC61BP60468 96 aaKnown RBP9.89□□□□□ -0.83
SCAMP4-213ENST00000621748 XP32Q5T750 250 aa9.89□□□□□ -0.83
SCAMP4-213ENST00000621748 Q6Q795 121 aa9.89□□□□□ -0.83
SCAMP4-213ENST00000621748 TRBV7-4A0A0J9YYF1 115 aa9.88□□□□□ -0.83
SCAMP4-213ENST00000621748 C14orf132Q9NPU4 83 aa9.87□□□□□ -0.83
SCAMP4-213ENST00000621748 LOC110117498A0A087WWA1 95 aa9.86□□□□□ -0.83
SCAMP4-213ENST00000621748 A0A1B0GV90 55 aa9.86□□□□□ -0.83
SCAMP4-213ENST00000621748 PRO0461Q9UI25 63 aa9.85□□□□□ -0.83
SCAMP4-213ENST00000621748 OBSCN-AS1Q96MR7 158 aa9.84□□□□□ -0.83
SCAMP4-213ENST00000621748 A0A087WSZ3 146 aa9.83□□□□□ -0.84
SCAMP4-213ENST00000621748 A0A1W2PNM2 257 aa9.83□□□□□ -0.84
SCAMP4-213ENST00000621748 SMCPP49901 116 aaPredicted RBP9.83□□□□□ -0.84
SCAMP4-213ENST00000621748 Q5XG85 94 aa9.83□□□□□ -0.84
SCAMP4-213ENST00000621748 A0A1B0GW54 56 aa9.82□□□□□ -0.84
SCAMP4-213ENST00000621748 Q6ZQT0 140 aa9.82□□□□□ -0.84
SCAMP4-213ENST00000621748 C9orf92A6NGG3 77 aa9.81□□□□□ -0.84
SCAMP4-213ENST00000621748 C1orf195Q5TG92 126 aa9.8□□□□□ -0.84
SCAMP4-213ENST00000621748 ETDBQ3ZM63 59 aa9.77□□□□□ -0.85
SCAMP4-213ENST00000621748 PCOTHQ58A44 107 aa9.73□□□□□ -0.85
SCAMP4-213ENST00000621748 NREPQ16612 68 aa9.71□□□□□ -0.86
SCAMP4-213ENST00000621748 KRTAP9-2Q9BYQ4 174 aa9.7□□□□□ -0.86
SCAMP4-213ENST00000621748 SIGMAR1Q99720 223 aa9.68□□□□□ -0.86
SCAMP4-213ENST00000621748 J3KT08 172 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms