RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 NDUFAF8A1L188 74 aa4.51□□□□□ -1.69
COLCA1-205ENST00000620864 STAB1Q9NY15 2570 aa4.51□□□□□ -1.69
COLCA1-205ENST00000620864 BPTFQ12830 3046 aa4.5□□□□□ -1.69
COLCA1-205ENST00000620864 MMP24-AS1A0A0U1RRL7 71 aa4.5□□□□□ -1.69
COLCA1-205ENST00000620864 A0A087X002 238 aa4.5□□□□□ -1.69
COLCA1-205ENST00000620864 GIG44P09565 113 aaPredicted RBP4.5□□□□□ -1.69
COLCA1-205ENST00000620864 CENPFP49454 3210 aa4.49□□□□□ -1.69
COLCA1-205ENST00000620864 A0A1W2PNN7 141 aa4.48□□□□□ -1.69
COLCA1-205ENST00000620864 R4GN34 69 aa4.46□□□□□ -1.7
COLCA1-205ENST00000620864 A0A0G2JQZ4 141 aa4.46□□□□□ -1.7
COLCA1-205ENST00000620864 H1FX-AS1Q4G0G2 97 aa4.46□□□□□ -1.7
COLCA1-205ENST00000620864 ADM2Q7Z4H4 148 aa4.45□□□□□ -1.7
COLCA1-205ENST00000620864 SPRR1BP22528 89 aa4.45□□□□□ -1.7
COLCA1-205ENST00000620864 Q5W150 140 aa4.45□□□□□ -1.7
COLCA1-205ENST00000620864 LINC00472Q9H8W2 130 aa4.43□□□□□ -1.7
COLCA1-205ENST00000620864 SPRR1AP35321 89 aa4.43□□□□□ -1.7
COLCA1-205ENST00000620864 SPATA8Q6RVD6 105 aa4.43□□□□□ -1.7
COLCA1-205ENST00000620864 DMBT1Q9UGM3 2413 aaPredicted RBP4.42□□□□□ -1.7
COLCA1-205ENST00000620864 Q6ZR54 194 aa4.41□□□□□ -1.7
COLCA1-205ENST00000620864 CEP350Q5VT06 3117 aa4.41□□□□□ -1.7
COLCA1-205ENST00000620864 HELZ2Q9BYK8 2649 aaKnown RBP4.4□□□□□ -1.71
COLCA1-205ENST00000620864 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.71
COLCA1-205ENST00000620864 CFAP46Q8IYW2 2715 aa4.4□□□□□ -1.71
COLCA1-205ENST00000620864 A6NN06 94 aa4.38□□□□□ -1.71
COLCA1-205ENST00000620864 PLAC8Q9NZF1 115 aa4.36□□□□□ -1.71
COLCA1-205ENST00000620864 ITPR3Q14573 2671 aa4.36□□□□□ -1.71
COLCA1-205ENST00000620864 M0QZ58 72 aa4.33□□□□□ -1.72
COLCA1-205ENST00000620864 NOTCH1P46531 2555 aa4.32□□□□□ -1.72
COLCA1-205ENST00000620864 DNAH12Q6ZR08 3092 aa4.32□□□□□ -1.72
COLCA1-205ENST00000620864 KRTAP26-1Q6PEX3 210 aa4.31□□□□□ -1.72
COLCA1-205ENST00000620864 A8MU10 97 aa4.31□□□□□ -1.72
COLCA1-205ENST00000620864 PANO1I0J062 215 aa4.29□□□□□ -1.72
COLCA1-205ENST00000620864 KRTAP29-1A8MX34 341 aaPredicted RBP4.28□□□□□ -1.72
COLCA1-205ENST00000620864 FLNAP21333 2647 aaKnown RBP4.28□□□□□ -1.72
COLCA1-205ENST00000620864 STAB2Q8WWQ8 2551 aa4.27□□□□□ -1.73
COLCA1-205ENST00000620864 C5orf42Q9H799 3197 aa4.26□□□□□ -1.73
COLCA1-205ENST00000620864 PRRC2CQ9Y520 2896 aaKnown RBP4.26□□□□□ -1.73
COLCA1-205ENST00000620864 C20orf166-AS1Q96NR2 134 aa4.26□□□□□ -1.73
COLCA1-205ENST00000620864 AKAP13Q12802 2813 aa4.26□□□□□ -1.73
COLCA1-205ENST00000620864 TEP1Q99973 2627 aaKnown RBP4.25□□□□□ -1.73
COLCA1-205ENST00000620864 PCNTO95613 3336 aa4.24□□□□□ -1.73
COLCA1-205ENST00000620864 Q8NDZ9 215 aa4.24□□□□□ -1.73
COLCA1-205ENST00000620864 NBEAL1Q6ZS30 2694 aa4.24□□□□□ -1.73
COLCA1-205ENST00000620864 RPS29P62273 56 aaKnown RBP4.23□□□□□ -1.73
COLCA1-205ENST00000620864 PP632Q6XCG6 107 aa4.23□□□□□ -1.73
COLCA1-205ENST00000620864 TEX15Q9BXT5 2789 aa4.23□□□□□ -1.73
COLCA1-205ENST00000620864 KRTAP10-1P60331 282 aa4.22□□□□□ -1.73
COLCA1-205ENST00000620864 KRTAP10-2P60368 255 aa4.22□□□□□ -1.73
COLCA1-205ENST00000620864 UNC79Q9P2D8 2635 aa4.21□□□□□ -1.74
COLCA1-205ENST00000620864 CENPEQ02224 2701 aa4.19□□□□□ -1.74
COLCA1-205ENST00000620864 A8MUU9 505 aa4.18□□□□□ -1.74
COLCA1-205ENST00000620864 MKI67P46013 3256 aaKnown RBP4.18□□□□□ -1.74
COLCA1-205ENST00000620864 KRTAP4-16G5E9R7 235 aaPredicted RBP4.17□□□□□ -1.74
COLCA1-205ENST00000620864 TNP1P09430 55 aa4.15□□□□□ -1.74
COLCA1-205ENST00000620864 KRTAP11-1Q8IUC1 163 aa4.15□□□□□ -1.75
COLCA1-205ENST00000620864 CHD7Q9P2D1 2997 aa4.13□□□□□ -1.75
COLCA1-205ENST00000620864 C10orf95Q9H7T3 257 aa4.13□□□□□ -1.75
COLCA1-205ENST00000620864 COL6A5A8TX70 2615 aa4.12□□□□□ -1.75
COLCA1-205ENST00000620864 KRTAP1-5Q9BYS1 174 aa4.12□□□□□ -1.75
COLCA1-205ENST00000620864 CHD6Q8TD26 2715 aa4.11□□□□□ -1.75
COLCA1-205ENST00000620864 NOTCH2NLQ7Z3S9 236 aa4.1□□□□□ -1.75
COLCA1-205ENST00000620864 LAMA3Q16787 3333 aa4.09□□□□□ -1.75
COLCA1-205ENST00000620864 RANBP2P49792 3224 aaKnown RBP4.09□□□□□ -1.76
COLCA1-205ENST00000620864 HTTP42858 3142 aa4.09□□□□□ -1.76
COLCA1-205ENST00000620864 KMT2BQ9UMN6 2715 aaPredicted RBP4.08□□□□□ -1.76
COLCA1-205ENST00000620864 P0C880 135 aa4.08□□□□□ -1.76
COLCA1-205ENST00000620864 IGSF10Q6WRI0 2623 aa4.07□□□□□ -1.76
COLCA1-205ENST00000620864 PRUNE2Q8WUY3 3088 aa4.07□□□□□ -1.76
COLCA1-205ENST00000620864 KRTAP10-10P60014 251 aa4.03□□□□□ -1.76
COLCA1-205ENST00000620864 BRCA2P51587 3418 aa4.03□□□□□ -1.76
COLCA1-205ENST00000620864 GCN1Q92616 2671 aaKnown RBP4.01□□□□□ -1.77
COLCA1-205ENST00000620864 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
COLCA1-205ENST00000620864 CHD9Q3L8U1 2897 aa4□□□□□ -1.77
COLCA1-205ENST00000620864 MGAQ8IWI9 3026 aa3.98□□□□□ -1.77
COLCA1-205ENST00000620864 A0A0C4DFX4 3053 aa3.98□□□□□ -1.77
COLCA1-205ENST00000620864 Q6ZRN7 208 aaPredicted RBP3.96□□□□□ -1.77
COLCA1-205ENST00000620864 CDH23Q9H251 3354 aa3.95□□□□□ -1.78
COLCA1-205ENST00000620864 XIRP2A4UGR9 3374 aa3.95□□□□□ -1.78
COLCA1-205ENST00000620864 CRYBG3Q68DQ2 2970 aa3.94□□□□□ -1.78
COLCA1-205ENST00000620864 TNRC18O15417 2968 aaPredicted RBP3.94□□□□□ -1.78
COLCA1-205ENST00000620864 A0A1B0GVY2 172 aa3.94□□□□□ -1.78
COLCA1-205ENST00000620864 ZNF292O60281 2723 aa3.94□□□□□ -1.78
COLCA1-205ENST00000620864 KRTAP13-1Q8IUC0 172 aa3.93□□□□□ -1.78
COLCA1-205ENST00000620864 KRTAP10-8P60410 259 aa3.92□□□□□ -1.78
COLCA1-205ENST00000620864 SZT2Q5T011 3432 aa3.92□□□□□ -1.78
COLCA1-205ENST00000620864 COL6A3P12111 3177 aa3.91□□□□□ -1.78
COLCA1-205ENST00000620864 WDFY4Q6ZS81 3184 aa3.91□□□□□ -1.78
COLCA1-205ENST00000620864 REV3LO60673 3130 aa3.9□□□□□ -1.78
COLCA1-205ENST00000620864 ITPR2Q14571 2701 aa3.9□□□□□ -1.79
COLCA1-205ENST00000620864 FLNCQ14315 2725 aa3.9□□□□□ -1.79
COLCA1-205ENST00000620864 CFAP54Q96N23 3096 aa3.9□□□□□ -1.79
COLCA1-205ENST00000620864 FRYQ5TBA9 3013 aa3.89□□□□□ -1.79
COLCA1-205ENST00000620864 NSD1Q96L73 2696 aaPredicted RBP3.88□□□□□ -1.79
COLCA1-205ENST00000620864 UNC80Q8N2C7 3258 aa3.88□□□□□ -1.79
COLCA1-205ENST00000620864 TRANK1O15050 2925 aa3.88□□□□□ -1.79
COLCA1-205ENST00000620864 MAP1AP78559 2803 aaPredicted RBP3.88□□□□□ -1.79
COLCA1-205ENST00000620864 H0YAA0 97 aa3.87□□□□□ -1.79
COLCA1-205ENST00000620864 DSPP15924 2871 aaKnown RBP3.86□□□□□ -1.79
COLCA1-205ENST00000620864 KRTAP13-2Q52LG2 175 aa3.85□□□□□ -1.79
COLCA1-205ENST00000620864 UBR5O95071 2799 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms