RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 PIEZO1Q92508 2521 aa8.67□□□□□ -1.02
PTPN9-206ENST00000618819 PLAC8Q9NZF1 115 aa8.66□□□□□ -1.02
PTPN9-206ENST00000618819 A6NN06 94 aa8.66□□□□□ -1.02
PTPN9-206ENST00000618819 ANKRD11Q6UB99 2663 aaPredicted RBP8.65□□□□□ -1.02
PTPN9-206ENST00000618819 BPTFQ12830 3046 aa8.65□□□□□ -1.02
PTPN9-206ENST00000618819 A8MU10 97 aa8.65□□□□□ -1.03
PTPN9-206ENST00000618819 PCNTO95613 3336 aa8.64□□□□□ -1.03
PTPN9-206ENST00000618819 CEP350Q5VT06 3117 aa8.62□□□□□ -1.03
PTPN9-206ENST00000618819 Q6ZR54 194 aa8.61□□□□□ -1.03
PTPN9-206ENST00000618819 USP24Q9UPU5 2620 aa8.6□□□□□ -1.03
PTPN9-206ENST00000618819 SPRR1BP22528 89 aa8.59□□□□□ -1.03
PTPN9-206ENST00000618819 SEC61BP60468 96 aaKnown RBP8.57□□□□□ -1.04
PTPN9-206ENST00000618819 PANO1I0J062 215 aa8.52□□□□□ -1.04
PTPN9-206ENST00000618819 CEP295Q9C0D2 2601 aa8.51□□□□□ -1.05
PTPN9-206ENST00000618819 KRTAP29-1A8MX34 341 aaPredicted RBP8.48□□□□□ -1.05
PTPN9-206ENST00000618819 C10orf95Q9H7T3 257 aa8.48□□□□□ -1.05
PTPN9-206ENST00000618819 A0A087X002 238 aa8.45□□□□□ -1.06
PTPN9-206ENST00000618819 NOTCH2NLQ7Z3S9 236 aa8.45□□□□□ -1.06
PTPN9-206ENST00000618819 KRTAP1-3Q8IUG1 177 aa8.45□□□□□ -1.06
PTPN9-206ENST00000618819 Q5VSD8 79 aa8.44□□□□□ -1.06
PTPN9-206ENST00000618819 KRTAP1-5Q9BYS1 174 aa8.42□□□□□ -1.06
PTPN9-206ENST00000618819 KRTAP1-1Q07627 177 aa8.42□□□□□ -1.06
PTPN9-206ENST00000618819 MGAM2Q2M2H8 2515 aa8.38□□□□□ -1.07
PTPN9-206ENST00000618819 A8MUU9 505 aa8.38□□□□□ -1.07
PTPN9-206ENST00000618819 KRTAP10-1P60331 282 aa8.37□□□□□ -1.07
PTPN9-206ENST00000618819 FASNP49327 2511 aaKnown RBP8.37□□□□□ -1.07
PTPN9-206ENST00000618819 HTTP42858 3142 aa8.34□□□□□ -1.07
PTPN9-206ENST00000618819 KRTAP10-2P60368 255 aa8.34□□□□□ -1.07
PTPN9-206ENST00000618819 DMBT1Q9UGM3 2413 aaPredicted RBP8.32□□□□□ -1.08
PTPN9-206ENST00000618819 C5orf42Q9H799 3197 aa8.3□□□□□ -1.08
PTPN9-206ENST00000618819 KRTAP4-16G5E9R7 235 aaPredicted RBP8.29□□□□□ -1.08
PTPN9-206ENST00000618819 CHD7Q9P2D1 2997 aa8.28□□□□□ -1.08
PTPN9-206ENST00000618819 TRANK1O15050 2925 aa8.28□□□□□ -1.08
PTPN9-206ENST00000618819 EPG5Q9HCE0 2579 aa8.25□□□□□ -1.09
PTPN9-206ENST00000618819 KRTAP11-1Q8IUC1 163 aa8.24□□□□□ -1.09
PTPN9-206ENST00000618819 TNP1P09430 55 aa8.22□□□□□ -1.09
PTPN9-206ENST00000618819 BRCA2P51587 3418 aa8.21□□□□□ -1.1
PTPN9-206ENST00000618819 PRRC2CQ9Y520 2896 aaKnown RBP8.2□□□□□ -1.1
PTPN9-206ENST00000618819 CHD9Q3L8U1 2897 aa8.17□□□□□ -1.1
PTPN9-206ENST00000618819 LCE6AA0A183 80 aa8.15□□□□□ -1.11
PTPN9-206ENST00000618819 ATRQ13535 2644 aa8.13□□□□□ -1.11
PTPN9-206ENST00000618819 NBEAL1Q6ZS30 2694 aa8.09□□□□□ -1.11
PTPN9-206ENST00000618819 MKI67P46013 3256 aaKnown RBP8.09□□□□□ -1.12
PTPN9-206ENST00000618819 HECTD1Q9ULT8 2610 aa8.07□□□□□ -1.12
PTPN9-206ENST00000618819 LAMA2P24043 3122 aaKnown RBP8.03□□□□□ -1.12
PTPN9-206ENST00000618819 A0A0C4DFX4 3053 aa8.02□□□□□ -1.13
PTPN9-206ENST00000618819 AKAP13Q12802 2813 aa8.02□□□□□ -1.13
PTPN9-206ENST00000618819 FLNAP21333 2647 aaKnown RBP8.01□□□□□ -1.13
PTPN9-206ENST00000618819 STAB2Q8WWQ8 2551 aa8.01□□□□□ -1.13
PTPN9-206ENST00000618819 ITPR3Q14573 2671 aa8□□□□□ -1.13
PTPN9-206ENST00000618819 LAMA3Q16787 3333 aa8□□□□□ -1.13
PTPN9-206ENST00000618819 KRTAP10-8P60410 259 aa7.98□□□□□ -1.13
PTPN9-206ENST00000618819 RANBP2P49792 3224 aaKnown RBP7.98□□□□□ -1.13
PTPN9-206ENST00000618819 MAST4O15021 2626 aa7.97□□□□□ -1.13
PTPN9-206ENST00000618819 KRTAP13-2Q52LG2 175 aa7.96□□□□□ -1.14
PTPN9-206ENST00000618819 KRTAP7-1Q8IUC3 87 aa7.95□□□□□ -1.14
PTPN9-206ENST00000618819 P0C880 135 aa7.95□□□□□ -1.14
PTPN9-206ENST00000618819 STAB1Q9NY15 2570 aa7.94□□□□□ -1.14
PTPN9-206ENST00000618819 RPS29P62273 56 aaKnown RBP7.93□□□□□ -1.14
PTPN9-206ENST00000618819 PP632Q6XCG6 107 aa7.93□□□□□ -1.14
PTPN9-206ENST00000618819 CENPEQ02224 2701 aa7.91□□□□□ -1.14
PTPN9-206ENST00000618819 CHD6Q8TD26 2715 aa7.91□□□□□ -1.14
PTPN9-206ENST00000618819 CFAP46Q8IYW2 2715 aa7.9□□□□□ -1.14
PTPN9-206ENST00000618819 CDH23Q9H251 3354 aa7.88□□□□□ -1.15
PTPN9-206ENST00000618819 H0YAA0 97 aa7.88□□□□□ -1.15
PTPN9-206ENST00000618819 FLNBO75369 2602 aaKnown RBP7.86□□□□□ -1.15
PTPN9-206ENST00000618819 Q6ZRN7 208 aaPredicted RBP7.86□□□□□ -1.15
PTPN9-206ENST00000618819 USP34Q70CQ2 3546 aa7.86□□□□□ -1.15
PTPN9-206ENST00000618819 TRIOO75962 3097 aa7.84□□□□□ -1.15
PTPN9-206ENST00000618819 A0A1B0GVY2 172 aa7.82□□□□□ -1.16
PTPN9-206ENST00000618819 DNAH14Q0VDD8 3507 aa7.81□□□□□ -1.16
PTPN9-206ENST00000618819 CFAP54Q96N23 3096 aa7.8□□□□□ -1.16
PTPN9-206ENST00000618819 KRTAP13-1Q8IUC0 172 aa7.8□□□□□ -1.16
PTPN9-206ENST00000618819 UNC79Q9P2D8 2635 aa7.78□□□□□ -1.16
PTPN9-206ENST00000618819 UNC80Q8N2C7 3258 aa7.77□□□□□ -1.17
PTPN9-206ENST00000618819 GCN1Q92616 2671 aaKnown RBP7.76□□□□□ -1.17
PTPN9-206ENST00000618819 PRUNE2Q8WUY3 3088 aa7.75□□□□□ -1.17
PTPN9-206ENST00000618819 NOTCH1P46531 2555 aa7.74□□□□□ -1.17
PTPN9-206ENST00000618819 LAMA1P25391 3075 aa7.73□□□□□ -1.17
PTPN9-206ENST00000618819 TEX15Q9BXT5 2789 aa7.69□□□□□ -1.18
PTPN9-206ENST00000618819 HELZ2Q9BYK8 2649 aaKnown RBP7.68□□□□□ -1.18
PTPN9-206ENST00000618819 SZT2Q5T011 3432 aa7.67□□□□□ -1.18
PTPN9-206ENST00000618819 XIRP2A4UGR9 3374 aa7.66□□□□□ -1.18
PTPN9-206ENST00000618819 VPS13AQ96RL7 3174 aa7.66□□□□□ -1.18
PTPN9-206ENST00000618819 FREM2Q5SZK8 3169 aa7.65□□□□□ -1.18
PTPN9-206ENST00000618819 NBEAL2Q6ZNJ1 2754 aa7.65□□□□□ -1.18
PTPN9-206ENST00000618819 SPTBN5Q9NRC6 3674 aaKnown RBP7.63□□□□□ -1.19
PTPN9-206ENST00000618819 COL6A5A8TX70 2615 aa7.62□□□□□ -1.19
PTPN9-206ENST00000618819 REV3LO60673 3130 aa7.61□□□□□ -1.19
PTPN9-206ENST00000618819 VCANP13611 3396 aa7.6□□□□□ -1.19
PTPN9-206ENST00000618819 ZNF292O60281 2723 aa7.6□□□□□ -1.19
PTPN9-206ENST00000618819 XP32Q5T750 250 aa7.56□□□□□ -1.2
PTPN9-206ENST00000618819 DSPP15924 2871 aaKnown RBP7.53□□□□□ -1.2
PTPN9-206ENST00000618819 MGAQ8IWI9 3026 aa7.51□□□□□ -1.21
PTPN9-206ENST00000618819 KRTAP10-10P60014 251 aa7.51□□□□□ -1.21
PTPN9-206ENST00000618819 TEP1Q99973 2627 aaKnown RBP7.5□□□□□ -1.21
PTPN9-206ENST00000618819 BAHCC1Q9P281 2608 aa7.48□□□□□ -1.21
PTPN9-206ENST00000618819 WDFY4Q6ZS81 3184 aa7.46□□□□□ -1.22
PTPN9-206ENST00000618819 CELSR3Q9NYQ7 3312 aa7.46□□□□□ -1.22
PTPN9-206ENST00000618819 PRO2289Q9P1D8 64 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms