RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 ERC2-IT1O76042 136 aa9.01□□□□□ -0.97
CIITA-213ENST00000618327 NBEAL1Q6ZS30 2694 aa9□□□□□ -0.97
CIITA-213ENST00000618327 KLKP1Q107X0 134 aa8.98□□□□□ -0.97
CIITA-213ENST00000618327 ASPMQ8IZT6 3477 aa8.98□□□□□ -0.97
CIITA-213ENST00000618327 DCHS2Q6V1P9 2916 aa8.97□□□□□ -0.97
CIITA-213ENST00000618327 CYP4F30PQ9H0H9 118 aa8.97□□□□□ -0.97
CIITA-213ENST00000618327 LINC00336Q6ZUF6 198 aa8.97□□□□□ -0.97
CIITA-213ENST00000618327 SPACA4Q8TDM5 124 aa8.97□□□□□ -0.97
CIITA-213ENST00000618327 IGLV8-61A0A075B6I0 122 aa8.96□□□□□ -0.97
CIITA-213ENST00000618327 A0A1W2PNN7 141 aa8.96□□□□□ -0.97
CIITA-213ENST00000618327 RPL37AP61513 92 aaKnown RBP8.96□□□□□ -0.97
CIITA-213ENST00000618327 K7EQZ3 153 aa8.94□□□□□ -0.98
CIITA-213ENST00000618327 NF1P21359 2839 aa8.93□□□□□ -0.98
CIITA-213ENST00000618327 KMT2BQ9UMN6 2715 aaPredicted RBP8.92□□□□□ -0.98
CIITA-213ENST00000618327 NIPBLQ6KC79 2804 aaeCLIP8.92□□□□□ -0.98
CIITA-213ENST00000618327 COA5Q86WW8 74 aa8.92□□□□□ -0.98
CIITA-213ENST00000618327 LOC101927531A0A1B0GV80 90 aa8.92□□□□□ -0.98
CIITA-213ENST00000618327 LINC01600Q96MT4 127 aa8.91□□□□□ -0.98
CIITA-213ENST00000618327 Q8N377 158 aa8.91□□□□□ -0.98
CIITA-213ENST00000618327 H7BZZ5 65 aa8.9□□□□□ -0.98
CIITA-213ENST00000618327 FAM229AH3BQW9 127 aa8.9□□□□□ -0.98
CIITA-213ENST00000618327 IGLV5-37A0A075B6J1 123 aa8.89□□□□□ -0.99
CIITA-213ENST00000618327 A8MWP4 228 aa8.89□□□□□ -0.99
CIITA-213ENST00000618327 LINC00313P59037 77 aa8.89□□□□□ -0.99
CIITA-213ENST00000618327 ZNF861PO60384 105 aa8.89□□□□□ -0.99
CIITA-213ENST00000618327 UQCR11O14957 56 aa8.88□□□□□ -0.99
CIITA-213ENST00000618327 SPINT4Q6UDR6 99 aa8.87□□□□□ -0.99
CIITA-213ENST00000618327 CD164Q04900 197 aa8.87□□□□□ -0.99
CIITA-213ENST00000618327 TNP2Q05952 138 aa8.86□□□□□ -0.99
CIITA-213ENST00000618327 TYMSOSQ8TAI1 123 aa8.86□□□□□ -0.99
CIITA-213ENST00000618327 FBN2P35556 2912 aa8.86□□□□□ -0.99
CIITA-213ENST00000618327 PSORS1C2Q9UIG4 136 aa8.85□□□□□ -0.99
CIITA-213ENST00000618327 MRPL34Q9BQ48 92 aaKnown RBP8.85□□□□□ -0.99
CIITA-213ENST00000618327 IGFL1Q6UW32 110 aa8.84□□□□□ -0.99
CIITA-213ENST00000618327 ASH1LQ9NR48 2969 aaKnown RBP8.83□□□□□ -1
CIITA-213ENST00000618327 ZFHX4Q86UP3 3567 aa8.83□□□□□ -1
CIITA-213ENST00000618327 PLA2G1BP04054 148 aaKnown RBP8.83□□□□□ -1
CIITA-213ENST00000618327 KRTAP1-5Q9BYS1 174 aa8.83□□□□□ -1
CIITA-213ENST00000618327 SSBP3-AS1Q7Z2R9 100 aa8.82□□□□□ -1
CIITA-213ENST00000618327 MXRA5Q9NR99 2828 aa8.82□□□□□ -1
CIITA-213ENST00000618327 KRTAP26-1Q6PEX3 210 aa8.82□□□□□ -1
CIITA-213ENST00000618327 PRR15Q8IV56 129 aa8.8□□□□□ -1
CIITA-213ENST00000618327 IGLV7-43P04211 117 aa8.8□□□□□ -1
CIITA-213ENST00000618327 Q8NDZ9 215 aa8.8□□□□□ -1
CIITA-213ENST00000618327 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.78□□□□□ -1
CIITA-213ENST00000618327 TENM4Q6N022 2769 aa8.78□□□□□ -1
CIITA-213ENST00000618327 A0A0G2JQZ4 141 aa8.78□□□□□ -1
CIITA-213ENST00000618327 KTN1-AS1Q86SY8 53 aa8.77□□□□□ -1
CIITA-213ENST00000618327 SMR3BP02814 79 aaPredicted RBP8.77□□□□□ -1.01
CIITA-213ENST00000618327 MIR22HGQ0VDD5 57 aa8.77□□□□□ -1.01
CIITA-213ENST00000618327 ANAPC11Q9NYG5 84 aa8.76□□□□□ -1.01
CIITA-213ENST00000618327 SPRR4Q96PI1 79 aa8.76□□□□□ -1.01
CIITA-213ENST00000618327 FLG2Q5D862 2391 aaPredicted RBP8.76□□□□□ -1.01
CIITA-213ENST00000618327 C8orf17Q9NRJ1 99 aa8.75□□□□□ -1.01
CIITA-213ENST00000618327 Q96NJ1 140 aa8.74□□□□□ -1.01
CIITA-213ENST00000618327 LCA10Q71F78 164 aa8.74□□□□□ -1.01
CIITA-213ENST00000618327 IGLV5-48A0A075B6I7 105 aa8.72□□□□□ -1.01
CIITA-213ENST00000618327 OBSCN-AS1Q96MR7 158 aa8.72□□□□□ -1.01
CIITA-213ENST00000618327 A0A1W2PNM2 257 aa8.72□□□□□ -1.01
CIITA-213ENST00000618327 STAB2Q8WWQ8 2551 aa8.69□□□□□ -1.02
CIITA-213ENST00000618327 A0A1B0GVX0 72 aa8.68□□□□□ -1.02
CIITA-213ENST00000618327 CRIPTQ9P021 101 aa8.68□□□□□ -1.02
CIITA-213ENST00000618327 SPRR1AP35321 89 aa8.68□□□□□ -1.02
CIITA-213ENST00000618327 PLAC8Q9NZF1 115 aa8.66□□□□□ -1.02
CIITA-213ENST00000618327 SPANXA2-OT1Q8N9U9 137 aa8.66□□□□□ -1.02
CIITA-213ENST00000618327 LINC00304Q8N9R0 145 aa8.66□□□□□ -1.02
CIITA-213ENST00000618327 PDZD2O15018 2839 aa8.64□□□□□ -1.03
CIITA-213ENST00000618327 DSCR10P59022 87 aa8.64□□□□□ -1.03
CIITA-213ENST00000618327 SMG1Q96Q15 3661 aaKnown RBP8.64□□□□□ -1.03
CIITA-213ENST00000618327 CDC42SE1Q9NRR8 79 aa8.63□□□□□ -1.03
CIITA-213ENST00000618327 OCR1Q9BZK8 76 aa8.59□□□□□ -1.03
CIITA-213ENST00000618327 Q6ZR54 194 aa8.59□□□□□ -1.03
CIITA-213ENST00000618327 Q1T7F1 81 aa8.56□□□□□ -1.04
CIITA-213ENST00000618327 KRTAP21-3Q3LHN1 58 aa8.56□□□□□ -1.04
CIITA-213ENST00000618327 LCE6AA0A183 80 aa8.55□□□□□ -1.04
CIITA-213ENST00000618327 PRR26Q8N8Z3 221 aa8.55□□□□□ -1.04
CIITA-213ENST00000618327 KRTAP10-2P60368 255 aa8.53□□□□□ -1.04
CIITA-213ENST00000618327 J3QL48 77 aa8.51□□□□□ -1.05
CIITA-213ENST00000618327 PANO1I0J062 215 aa8.5□□□□□ -1.05
CIITA-213ENST00000618327 SPRR1BP22528 89 aa8.5□□□□□ -1.05
CIITA-213ENST00000618327 KRTAP10-1P60331 282 aa8.5□□□□□ -1.05
CIITA-213ENST00000618327 OTOGQ6ZRI0 2925 aa8.5□□□□□ -1.05
CIITA-213ENST00000618327 NBPF19A0A087WUL8 3843 aa8.48□□□□□ -1.05
CIITA-213ENST00000618327 FAM229BQ4G0N7 80 aa8.48□□□□□ -1.05
CIITA-213ENST00000618327 Q6ZRN7 208 aaPredicted RBP8.48□□□□□ -1.05
CIITA-213ENST00000618327 KRTAP4-16G5E9R7 235 aaPredicted RBP8.47□□□□□ -1.05
CIITA-213ENST00000618327 SPENQ96T58 3664 aaKnown RBP8.46□□□□□ -1.05
CIITA-213ENST00000618327 RBM12B-AS1Q9P1G2 102 aa8.46□□□□□ -1.05
CIITA-213ENST00000618327 TENM1Q9UKZ4 2725 aa8.46□□□□□ -1.05
CIITA-213ENST00000618327 C9orf92A6NGG3 77 aa8.45□□□□□ -1.06
CIITA-213ENST00000618327 Q5XG85 94 aa8.45□□□□□ -1.06
CIITA-213ENST00000618327 CELSR1Q9NYQ6 3014 aa8.45□□□□□ -1.06
CIITA-213ENST00000618327 BSNQ9UPA5 3926 aa8.45□□□□□ -1.06
CIITA-213ENST00000618327 Q8N1X5 172 aa8.45□□□□□ -1.06
CIITA-213ENST00000618327 A0A0D9SG42 100 aa8.43□□□□□ -1.06
CIITA-213ENST00000618327 IGLV7-46A0A075B6I9 117 aa8.43□□□□□ -1.06
CIITA-213ENST00000618327 FP248Q71RG6 208 aaPredicted RBP8.42□□□□□ -1.06
CIITA-213ENST00000618327 CYSTM1Q9H1C7 97 aa8.41□□□□□ -1.06
CIITA-213ENST00000618327 Q75L30 129 aa8.41□□□□□ -1.06
CIITA-213ENST00000618327 Q8N9P0 234 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms