RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 NOTCH1P46531 2555 aa7□□□□□ -1.29
CCDC144B-208ENST00000618081 DMAC1Q96GE9 116 aa6.99□□□□□ -1.29
CCDC144B-208ENST00000618081 TEP1Q99973 2627 aaKnown RBP6.99□□□□□ -1.29
CCDC144B-208ENST00000618081 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.97□□□□□ -1.29
CCDC144B-208ENST00000618081 ZCCHC13Q8WW36 166 aaKnown RBP6.97□□□□□ -1.29
CCDC144B-208ENST00000618081 SEC61BP60468 96 aaKnown RBP6.95□□□□□ -1.3
CCDC144B-208ENST00000618081 Q75L30 129 aa6.95□□□□□ -1.3
CCDC144B-208ENST00000618081 KRTAP1-1Q07627 177 aa6.95□□□□□ -1.3
CCDC144B-208ENST00000618081 PLAC8Q9NZF1 115 aa6.94□□□□□ -1.3
CCDC144B-208ENST00000618081 A0A0C4DFX4 3053 aa6.94□□□□□ -1.3
CCDC144B-208ENST00000618081 SETXQ7Z333 2677 aaKnown RBP6.94□□□□□ -1.3
CCDC144B-208ENST00000618081 R4GN34 69 aa6.93□□□□□ -1.3
CCDC144B-208ENST00000618081 MAP1AP78559 2803 aaPredicted RBP6.92□□□□□ -1.3
CCDC144B-208ENST00000618081 STAB2Q8WWQ8 2551 aa6.92□□□□□ -1.3
CCDC144B-208ENST00000618081 MGAQ8IWI9 3026 aa6.9□□□□□ -1.3
CCDC144B-208ENST00000618081 XIRP2A4UGR9 3374 aa6.89□□□□□ -1.31
CCDC144B-208ENST00000618081 WIPF1O43516 503 aa6.88□□□□□ -1.31
CCDC144B-208ENST00000618081 ZNF292O60281 2723 aa6.88□□□□□ -1.31
CCDC144B-208ENST00000618081 CHD7Q9P2D1 2997 aa6.88□□□□□ -1.31
CCDC144B-208ENST00000618081 MKI67P46013 3256 aaKnown RBP6.86□□□□□ -1.31
CCDC144B-208ENST00000618081 A0A0A0MQY5 61 aa6.85□□□□□ -1.31
CCDC144B-208ENST00000618081 BAHCC1Q9P281 2608 aa6.84□□□□□ -1.31
CCDC144B-208ENST00000618081 MMP24-AS1A0A0U1RRL7 71 aa6.84□□□□□ -1.31
CCDC144B-208ENST00000618081 Q5VSD8 79 aa6.84□□□□□ -1.31
CCDC144B-208ENST00000618081 APCP25054 2843 aa6.84□□□□□ -1.32
CCDC144B-208ENST00000618081 SPINK7P58062 85 aa6.83□□□□□ -1.32
CCDC144B-208ENST00000618081 Q5W150 140 aa6.83□□□□□ -1.32
CCDC144B-208ENST00000618081 LINC01558Q9Y6Z2 57 aa6.81□□□□□ -1.32
CCDC144B-208ENST00000618081 TRANK1O15050 2925 aa6.81□□□□□ -1.32
CCDC144B-208ENST00000618081 VPS13AQ96RL7 3174 aa6.8□□□□□ -1.32
CCDC144B-208ENST00000618081 SPRR1AP35321 89 aa6.8□□□□□ -1.32
CCDC144B-208ENST00000618081 PLAC4Q8WY50 150 aa6.79□□□□□ -1.32
CCDC144B-208ENST00000618081 Q8N9P0 234 aaPredicted RBP6.79□□□□□ -1.32
CCDC144B-208ENST00000618081 TRIOO75962 3097 aa6.77□□□□□ -1.33
CCDC144B-208ENST00000618081 LINC00472Q9H8W2 130 aa6.77□□□□□ -1.33
CCDC144B-208ENST00000618081 OXTP01178 125 aa6.75□□□□□ -1.33
CCDC144B-208ENST00000618081 NBEAL2Q6ZNJ1 2754 aa6.75□□□□□ -1.33
CCDC144B-208ENST00000618081 FP248Q71RG6 208 aaPredicted RBP6.75□□□□□ -1.33
CCDC144B-208ENST00000618081 SPRR1BP22528 89 aa6.74□□□□□ -1.33
CCDC144B-208ENST00000618081 ROMO1P60602 79 aa6.74□□□□□ -1.33
CCDC144B-208ENST00000618081 RPL37P61927 97 aaKnown RBP6.74□□□□□ -1.33
CCDC144B-208ENST00000618081 PRUNE2Q8WUY3 3088 aa6.74□□□□□ -1.33
CCDC144B-208ENST00000618081 M0QZ58 72 aa6.74□□□□□ -1.33
CCDC144B-208ENST00000618081 FRYQ5TBA9 3013 aa6.73□□□□□ -1.33
CCDC144B-208ENST00000618081 LCE6AA0A183 80 aa6.71□□□□□ -1.34
CCDC144B-208ENST00000618081 CELSR3Q9NYQ7 3312 aa6.7□□□□□ -1.34
CCDC144B-208ENST00000618081 WDFY4Q6ZS81 3184 aa6.7□□□□□ -1.34
CCDC144B-208ENST00000618081 DSPP15924 2871 aaKnown RBP6.7□□□□□ -1.34
CCDC144B-208ENST00000618081 NSD1Q96L73 2696 aaPredicted RBP6.69□□□□□ -1.34
CCDC144B-208ENST00000618081 H1FX-AS1Q4G0G2 97 aa6.69□□□□□ -1.34
CCDC144B-208ENST00000618081 Q5VV11 94 aa6.68□□□□□ -1.34
CCDC144B-208ENST00000618081 LAMA3Q16787 3333 aa6.67□□□□□ -1.34
CCDC144B-208ENST00000618081 ADM2Q7Z4H4 148 aa6.66□□□□□ -1.34
CCDC144B-208ENST00000618081 RANBP2P49792 3224 aaKnown RBP6.66□□□□□ -1.34
CCDC144B-208ENST00000618081 KRTAP10-1P60331 282 aa6.65□□□□□ -1.34
CCDC144B-208ENST00000618081 UTP20O75691 2785 aaKnown RBP6.65□□□□□ -1.35
CCDC144B-208ENST00000618081 Q8NDZ9 215 aa6.65□□□□□ -1.35
CCDC144B-208ENST00000618081 IGSF10Q6WRI0 2623 aa6.64□□□□□ -1.35
CCDC144B-208ENST00000618081 KRTAP26-1Q6PEX3 210 aa6.64□□□□□ -1.35
CCDC144B-208ENST00000618081 KRTAP1-5Q9BYS1 174 aa6.63□□□□□ -1.35
CCDC144B-208ENST00000618081 PRAC1Q96KF2 57 aa6.63□□□□□ -1.35
CCDC144B-208ENST00000618081 REV3LO60673 3130 aa6.62□□□□□ -1.35
CCDC144B-208ENST00000618081 KRTAP10-2P60368 255 aa6.61□□□□□ -1.35
CCDC144B-208ENST00000618081 FRYLO94915 3013 aa6.61□□□□□ -1.35
CCDC144B-208ENST00000618081 KALRNO60229 2985 aa6.61□□□□□ -1.35
CCDC144B-208ENST00000618081 FREM2Q5SZK8 3169 aa6.61□□□□□ -1.35
CCDC144B-208ENST00000618081 Q5XG85 94 aa6.6□□□□□ -1.35
CCDC144B-208ENST00000618081 Q6ZR54 194 aa6.6□□□□□ -1.35
CCDC144B-208ENST00000618081 BRCA2P51587 3418 aa6.59□□□□□ -1.35
CCDC144B-208ENST00000618081 H3BS24 57 aa6.59□□□□□ -1.36
CCDC144B-208ENST00000618081 UBR5O95071 2799 aaPredicted RBP6.58□□□□□ -1.36
CCDC144B-208ENST00000618081 CRYBG3Q68DQ2 2970 aa6.58□□□□□ -1.36
CCDC144B-208ENST00000618081 LRBAP50851 2863 aa6.58□□□□□ -1.36
CCDC144B-208ENST00000618081 PANO1I0J062 215 aa6.58□□□□□ -1.36
CCDC144B-208ENST00000618081 CHD9Q3L8U1 2897 aa6.57□□□□□ -1.36
CCDC144B-208ENST00000618081 ASB16-AS1Q495Z4 193 aa6.55□□□□□ -1.36
CCDC144B-208ENST00000618081 DNAH14Q0VDD8 3507 aa6.55□□□□□ -1.36
CCDC144B-208ENST00000618081 ITPR1Q14643 2758 aa6.52□□□□□ -1.37
CCDC144B-208ENST00000618081 CYSTM1Q9H1C7 97 aa6.52□□□□□ -1.37
CCDC144B-208ENST00000618081 RPS29P62273 56 aaKnown RBP6.52□□□□□ -1.37
CCDC144B-208ENST00000618081 USP34Q70CQ2 3546 aa6.51□□□□□ -1.37
CCDC144B-208ENST00000618081 HTTP42858 3142 aa6.51□□□□□ -1.37
CCDC144B-208ENST00000618081 SPATA8Q6RVD6 105 aa6.51□□□□□ -1.37
CCDC144B-208ENST00000618081 UNC80Q8N2C7 3258 aa6.51□□□□□ -1.37
CCDC144B-208ENST00000618081 CDH23Q9H251 3354 aa6.5□□□□□ -1.37
CCDC144B-208ENST00000618081 A0A087X002 238 aa6.49□□□□□ -1.37
CCDC144B-208ENST00000618081 LAMA1P25391 3075 aa6.47□□□□□ -1.37
CCDC144B-208ENST00000618081 KRTAP4-16G5E9R7 235 aaPredicted RBP6.47□□□□□ -1.37
CCDC144B-208ENST00000618081 A8MUU9 505 aa6.46□□□□□ -1.38
CCDC144B-208ENST00000618081 ASH1LQ9NR48 2969 aaKnown RBP6.46□□□□□ -1.38
CCDC144B-208ENST00000618081 DMXL2Q8TDJ6 3036 aa6.44□□□□□ -1.38
CCDC144B-208ENST00000618081 C20orf166-AS1Q96NR2 134 aa6.41□□□□□ -1.38
CCDC144B-208ENST00000618081 COL6A3P12111 3177 aa6.41□□□□□ -1.38
CCDC144B-208ENST00000618081 KRTAP29-1A8MX34 341 aaPredicted RBP6.4□□□□□ -1.38
CCDC144B-208ENST00000618081 COL12A1Q99715 3063 aa6.38□□□□□ -1.39
CCDC144B-208ENST00000618081 HIVEP1P15822 2718 aa6.37□□□□□ -1.39
CCDC144B-208ENST00000618081 KRTAP16-1A8MUX0 517 aa6.35□□□□□ -1.39
CCDC144B-208ENST00000618081 BOD1L1Q8NFC6 3051 aa6.34□□□□□ -1.39
CCDC144B-208ENST00000618081 FLNCQ14315 2725 aa6.34□□□□□ -1.39
CCDC144B-208ENST00000618081 TENM1Q9UKZ4 2725 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms