RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 PCSK5Q92824 1860 aa3.66□□□□□ -1.82
RFX3-212ENST00000617270 CENPFP49454 3210 aa3.65□□□□□ -1.82
RFX3-212ENST00000617270 DMBT1Q9UGM3 2413 aaPredicted RBP3.65□□□□□ -1.83
RFX3-212ENST00000617270 ADM2Q7Z4H4 148 aa3.65□□□□□ -1.83
RFX3-212ENST00000617270 PRRC2CQ9Y520 2896 aaKnown RBP3.65□□□□□ -1.83
RFX3-212ENST00000617270 KRTAP16-1A8MUX0 517 aa3.64□□□□□ -1.83
RFX3-212ENST00000617270 PLAC8Q9NZF1 115 aa3.64□□□□□ -1.83
RFX3-212ENST00000617270 Q5VSD8 79 aa3.64□□□□□ -1.83
RFX3-212ENST00000617270 LINC00472Q9H8W2 130 aa3.62□□□□□ -1.83
RFX3-212ENST00000617270 Q8NDZ9 215 aa3.62□□□□□ -1.83
RFX3-212ENST00000617270 C20orf166-AS1Q96NR2 134 aa3.61□□□□□ -1.83
RFX3-212ENST00000617270 CFAP46Q8IYW2 2715 aa3.61□□□□□ -1.83
RFX3-212ENST00000617270 NOTCH1P46531 2555 aa3.61□□□□□ -1.83
RFX3-212ENST00000617270 CENPEQ02224 2701 aa3.6□□□□□ -1.83
RFX3-212ENST00000617270 AKAP13Q12802 2813 aa3.59□□□□□ -1.83
RFX3-212ENST00000617270 KRTAP26-1Q6PEX3 210 aa3.58□□□□□ -1.84
RFX3-212ENST00000617270 SPRR1AP35321 89 aa3.58□□□□□ -1.84
RFX3-212ENST00000617270 BAHCC1Q9P281 2608 aa3.58□□□□□ -1.84
RFX3-212ENST00000617270 PANO1I0J062 215 aa3.58□□□□□ -1.84
RFX3-212ENST00000617270 KRTAP1-1Q07627 177 aa3.58□□□□□ -1.84
RFX3-212ENST00000617270 SETXQ7Z333 2677 aaKnown RBP3.57□□□□□ -1.84
RFX3-212ENST00000617270 HELZ2Q9BYK8 2649 aaKnown RBP3.57□□□□□ -1.84
RFX3-212ENST00000617270 OXTP01178 125 aa3.57□□□□□ -1.84
RFX3-212ENST00000617270 KRTAP1-3Q8IUG1 177 aa3.56□□□□□ -1.84
RFX3-212ENST00000617270 SPRR1BP22528 89 aa3.56□□□□□ -1.84
RFX3-212ENST00000617270 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
RFX3-212ENST00000617270 TEP1Q99973 2627 aaKnown RBP3.55□□□□□ -1.84
RFX3-212ENST00000617270 Q6ZR54 194 aa3.55□□□□□ -1.84
RFX3-212ENST00000617270 KRTAP1-5Q9BYS1 174 aa3.55□□□□□ -1.84
RFX3-212ENST00000617270 KRTAP10-1P60331 282 aa3.54□□□□□ -1.84
RFX3-212ENST00000617270 A8MU10 97 aa3.54□□□□□ -1.84
RFX3-212ENST00000617270 KRTAP10-2P60368 255 aa3.53□□□□□ -1.84
RFX3-212ENST00000617270 KRTAP25-1Q3LHN0 102 aa3.53□□□□□ -1.84
RFX3-212ENST00000617270 CHD6Q8TD26 2715 aa3.52□□□□□ -1.85
RFX3-212ENST00000617270 GCN1Q92616 2671 aaKnown RBP3.52□□□□□ -1.85
RFX3-212ENST00000617270 ASB16-AS1Q495Z4 193 aa3.52□□□□□ -1.85
RFX3-212ENST00000617270 UNC79Q9P2D8 2635 aa3.51□□□□□ -1.85
RFX3-212ENST00000617270 C10orf95Q9H7T3 257 aa3.51□□□□□ -1.85
RFX3-212ENST00000617270 COL6A5A8TX70 2615 aa3.51□□□□□ -1.85
RFX3-212ENST00000617270 TEX15Q9BXT5 2789 aa3.51□□□□□ -1.85
RFX3-212ENST00000617270 A8MUU9 505 aa3.49□□□□□ -1.85
RFX3-212ENST00000617270 SRCAPQ6ZRS2 3230 aa3.48□□□□□ -1.85
RFX3-212ENST00000617270 LCE6AA0A183 80 aa3.48□□□□□ -1.85
RFX3-212ENST00000617270 A0A087X002 238 aa3.47□□□□□ -1.85
RFX3-212ENST00000617270 A6NN06 94 aa3.47□□□□□ -1.85
RFX3-212ENST00000617270 NOTCH2NLQ7Z3S9 236 aa3.47□□□□□ -1.85
RFX3-212ENST00000617270 KRTAP29-1A8MX34 341 aaPredicted RBP3.46□□□□□ -1.86
RFX3-212ENST00000617270 NSD1Q96L73 2696 aaPredicted RBP3.44□□□□□ -1.86
RFX3-212ENST00000617270 TNP1P09430 55 aa3.42□□□□□ -1.86
RFX3-212ENST00000617270 KRTAP4-16G5E9R7 235 aaPredicted RBP3.41□□□□□ -1.86
RFX3-212ENST00000617270 KMT2BQ9UMN6 2715 aaPredicted RBP3.4□□□□□ -1.86
RFX3-212ENST00000617270 IGSF10Q6WRI0 2623 aa3.38□□□□□ -1.87
RFX3-212ENST00000617270 NBEAL2Q6ZNJ1 2754 aa3.37□□□□□ -1.87
RFX3-212ENST00000617270 KRTAP11-1Q8IUC1 163 aa3.35□□□□□ -1.87
RFX3-212ENST00000617270 KRTAP10-8P60410 259 aa3.34□□□□□ -1.87
RFX3-212ENST00000617270 RPS29P62273 56 aaKnown RBP3.34□□□□□ -1.87
RFX3-212ENST00000617270 KRTAP13-2Q52LG2 175 aa3.33□□□□□ -1.88
RFX3-212ENST00000617270 CEP350Q5VT06 3117 aa3.32□□□□□ -1.88
RFX3-212ENST00000617270 MAP1AP78559 2803 aaPredicted RBP3.32□□□□□ -1.88
RFX3-212ENST00000617270 ZNF292O60281 2723 aa3.31□□□□□ -1.88
RFX3-212ENST00000617270 UBR5O95071 2799 aaPredicted RBP3.3□□□□□ -1.88
RFX3-212ENST00000617270 PP632Q6XCG6 107 aa3.3□□□□□ -1.88
RFX3-212ENST00000617270 Q6ZRN7 208 aaPredicted RBP3.29□□□□□ -1.88
RFX3-212ENST00000617270 A0A1B0GVY2 172 aa3.29□□□□□ -1.88
RFX3-212ENST00000617270 KRTAP7-1Q8IUC3 87 aa3.26□□□□□ -1.89
RFX3-212ENST00000617270 P0C880 135 aa3.25□□□□□ -1.89
RFX3-212ENST00000617270 EP400Q96L91 3159 aa3.25□□□□□ -1.89
RFX3-212ENST00000617270 KRTAP13-1Q8IUC0 172 aa3.23□□□□□ -1.89
RFX3-212ENST00000617270 ITPR2Q14571 2701 aa3.21□□□□□ -1.89
RFX3-212ENST00000617270 H0YAA0 97 aa3.2□□□□□ -1.9
RFX3-212ENST00000617270 UTP20O75691 2785 aaKnown RBP3.2□□□□□ -1.9
RFX3-212ENST00000617270 KRTAP10-10P60014 251 aa3.2□□□□□ -1.9
RFX3-212ENST00000617270 CHD9Q3L8U1 2897 aa3.19□□□□□ -1.9
RFX3-212ENST00000617270 APCP25054 2843 aa3.19□□□□□ -1.9
RFX3-212ENST00000617270 XP32Q5T750 250 aa3.19□□□□□ -1.9
RFX3-212ENST00000617270 PRO2289Q9P1D8 64 aa3.18□□□□□ -1.9
RFX3-212ENST00000617270 HIVEP1P15822 2718 aa3.18□□□□□ -1.9
RFX3-212ENST00000617270 A0A0C4DFX4 3053 aa3.17□□□□□ -1.9
RFX3-212ENST00000617270 ITPR1Q14643 2758 aa3.17□□□□□ -1.9
RFX3-212ENST00000617270 C5orf42Q9H799 3197 aa3.16□□□□□ -1.9
RFX3-212ENST00000617270 FLNCQ14315 2725 aa3.15□□□□□ -1.9
RFX3-212ENST00000617270 FRYQ5TBA9 3013 aa3.15□□□□□ -1.91
RFX3-212ENST00000617270 TRANK1O15050 2925 aa3.14□□□□□ -1.91
RFX3-212ENST00000617270 TENM3Q9P273 2699 aa3.13□□□□□ -1.91
RFX3-212ENST00000617270 MGAQ8IWI9 3026 aa3.12□□□□□ -1.91
RFX3-212ENST00000617270 CFAP54Q96N23 3096 aa3.12□□□□□ -1.91
RFX3-212ENST00000617270 DSPP15924 2871 aaKnown RBP3.12□□□□□ -1.91
RFX3-212ENST00000617270 PCNTO95613 3336 aa3.11□□□□□ -1.91
RFX3-212ENST00000617270 TENM4Q6N022 2769 aa3.11□□□□□ -1.91
RFX3-212ENST00000617270 DNAH12Q6ZR08 3092 aa3.1□□□□□ -1.91
RFX3-212ENST00000617270 KRTAP1-4P0C5Y4 121 aa3.09□□□□□ -1.92
RFX3-212ENST00000617270 GOLGB1Q14789 3259 aaKnown RBP3.08□□□□□ -1.92
RFX3-212ENST00000617270 ASH1LQ9NR48 2969 aaKnown RBP3.08□□□□□ -1.92
RFX3-212ENST00000617270 REV3LO60673 3130 aa3.08□□□□□ -1.92
RFX3-212ENST00000617270 TPRXLQ17RH7 258 aa3.07□□□□□ -1.92
RFX3-212ENST00000617270 KRTAP12-2P59991 146 aa3.06□□□□□ -1.92
RFX3-212ENST00000617270 LRBAP50851 2863 aa3.06□□□□□ -1.92
RFX3-212ENST00000617270 KALRNO60229 2985 aa3.04□□□□□ -1.92
RFX3-212ENST00000617270 TENM1Q9UKZ4 2725 aa3.03□□□□□ -1.92
RFX3-212ENST00000617270 CRYBG3Q68DQ2 2970 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms