RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 CHD8Q9HCK8 2581 aa0.53□□□□□ -2.32
RFC3-203ENST00000616236 COL6A5A8TX70 2615 aa0.53□□□□□ -2.32
RFC3-203ENST00000616236 DEFB131BA0A096LNP1 70 aa0.53□□□□□ -2.32
RFC3-203ENST00000616236 PHGR1C9JFL3 82 aa0.53□□□□□ -2.32
RFC3-203ENST00000616236 PLXNC1O60486 1568 aa0.53□□□□□ -2.33
RFC3-203ENST00000616236 CCDC180Q9P1Z9 1646 aa0.53□□□□□ -2.33
RFC3-203ENST00000616236 RYR2Q92736 4967 aa0.51□□□□□ -2.33
RFC3-203ENST00000616236 H0YAA0 97 aa0.51□□□□□ -2.33
RFC3-203ENST00000616236 M0R2T5 61 aa0.51□□□□□ -2.33
RFC3-203ENST00000616236 KMT2CQ8NEZ4 4911 aaKnown RBP0.5□□□□□ -2.33
RFC3-203ENST00000616236 DEPDC5O75140 1603 aa0.5□□□□□ -2.33
RFC3-203ENST00000616236 ERICH3Q5RHP9 1530 aa0.5□□□□□ -2.33
RFC3-203ENST00000616236 MRPL33O75394 65 aaKnown RBP0.5□□□□□ -2.33
RFC3-203ENST00000616236 PDE4DIPQ5VU43 2346 aa0.5□□□□□ -2.33
RFC3-203ENST00000616236 STAB1Q9NY15 2570 aa0.5□□□□□ -2.33
RFC3-203ENST00000616236 TRANK1O15050 2925 aa0.49□□□□□ -2.33
RFC3-203ENST00000616236 RYR1P21817 5038 aa0.49□□□□□ -2.33
RFC3-203ENST00000616236 MYCBP2O75592 4640 aa0.49□□□□□ -2.33
RFC3-203ENST00000616236 A0A087WWC5 75 aa0.49□□□□□ -2.33
RFC3-203ENST00000616236 THOC2Q8NI27 1593 aaKnown RBP0.49□□□□□ -2.33
RFC3-203ENST00000616236 EP300Q09472 2414 aaPredicted RBP0.48□□□□□ -2.33
RFC3-203ENST00000616236 ANKHD1Q8IWZ3 2542 aaKnown RBP0.46□□□□□ -2.34
RFC3-203ENST00000616236 ETDCA0A1B0GVM5 59 aa0.46□□□□□ -2.34
RFC3-203ENST00000616236 DEFB135Q30KP9 77 aa0.46□□□□□ -2.34
RFC3-203ENST00000616236 BPTFQ12830 3046 aa0.46□□□□□ -2.34
RFC3-203ENST00000616236 WNK1Q9H4A3 2382 aa0.46□□□□□ -2.34
RFC3-203ENST00000616236 CRIP1P50238 77 aa0.45□□□□□ -2.34
RFC3-203ENST00000616236 C3P01024 1663 aa0.45□□□□□ -2.34
RFC3-203ENST00000616236 MAP1BP46821 2468 aaKnown RBP0.44□□□□□ -2.34
RFC3-203ENST00000616236 ABCA13Q86UQ4 5058 aa0.44□□□□□ -2.34
RFC3-203ENST00000616236 LINC01549A6NIU2 74 aa0.44□□□□□ -2.34
RFC3-203ENST00000616236 ABCA6Q8N139 1617 aa0.44□□□□□ -2.34
RFC3-203ENST00000616236 RNF213Q63HN8 5207 aa0.44□□□□□ -2.34
RFC3-203ENST00000616236 SSPOA2VEC9 5147 aa0.44□□□□□ -2.34
RFC3-203ENST00000616236 HERC1Q15751 4861 aa0.43□□□□□ -2.34
RFC3-203ENST00000616236 LYNX1G3V0Z9 82 aa0.43□□□□□ -2.34
RFC3-203ENST00000616236 SPTBN4Q9H254 2564 aa0.43□□□□□ -2.34
RFC3-203ENST00000616236 SPRR2DP22532 72 aa0.42□□□□□ -2.34
RFC3-203ENST00000616236 SETXQ7Z333 2677 aaKnown RBP0.42□□□□□ -2.34
RFC3-203ENST00000616236 LPAP08519 4548 aa0.42□□□□□ -2.34
RFC3-203ENST00000616236 ALMS1Q8TCU4 4167 aa0.42□□□□□ -2.34
RFC3-203ENST00000616236 EPPK1P58107 5090 aaKnown RBP0.41□□□□□ -2.34
RFC3-203ENST00000616236 FLNAP21333 2647 aaKnown RBP0.41□□□□□ -2.34
RFC3-203ENST00000616236 SETD2Q9BYW2 2564 aaPredicted RBP0.41□□□□□ -2.34
RFC3-203ENST00000616236 HYDINQ4G0P3 5121 aa0.4□□□□□ -2.35
RFC3-203ENST00000616236 IAPPP10997 89 aa0.4□□□□□ -2.35
RFC3-203ENST00000616236 DEFB114Q30KQ6 69 aa0.4□□□□□ -2.35
RFC3-203ENST00000616236 CREBBPQ92793 2442 aa0.4□□□□□ -2.35
RFC3-203ENST00000616236 DMBT1Q9UGM3 2413 aaPredicted RBP0.4□□□□□ -2.35
RFC3-203ENST00000616236 USP9XQ93008 2570 aaPredicted RBP0.4□□□□□ -2.35
RFC3-203ENST00000616236 APC2O95996 2303 aa0.39□□□□□ -2.35
RFC3-203ENST00000616236 DEFB130BP0DP73 79 aa0.39□□□□□ -2.35
RFC3-203ENST00000616236 DEFB130AP0DP74 79 aa0.39□□□□□ -2.35
RFC3-203ENST00000616236 S100ZQ8WXG8 99 aa0.39□□□□□ -2.35
RFC3-203ENST00000616236 SONP18583 2426 aaKnown RBP0.39□□□□□ -2.35
RFC3-203ENST00000616236 KIAA0586Q9BVV6 1533 aa0.38□□□□□ -2.35
RFC3-203ENST00000616236 RYR3Q15413 4870 aa0.38□□□□□ -2.35
RFC3-203ENST00000616236 DSPP15924 2871 aaKnown RBP0.37□□□□□ -2.35
RFC3-203ENST00000616236 ABCC6O95255 1503 aa0.37□□□□□ -2.35
RFC3-203ENST00000616236 NSD1Q96L73 2696 aaPredicted RBP0.37□□□□□ -2.35
RFC3-203ENST00000616236 HMCN2Q8NDA2 5059 aa0.37□□□□□ -2.35
RFC3-203ENST00000616236 DCHS2Q6V1P9 2916 aa0.37□□□□□ -2.35
RFC3-203ENST00000616236 GLI2P10070 1586 aa0.36□□□□□ -2.35
RFC3-203ENST00000616236 AKAP13Q12802 2813 aa0.36□□□□□ -2.35
RFC3-203ENST00000616236 TIAM1Q13009 1591 aa0.36□□□□□ -2.35
RFC3-203ENST00000616236 SFTA3P0C7M3 94 aa0.35□□□□□ -2.35
RFC3-203ENST00000616236 MYO18BQ8IUG5 2567 aa0.35□□□□□ -2.35
RFC3-203ENST00000616236 PDZD2O15018 2839 aa0.34□□□□□ -2.35
RFC3-203ENST00000616236 DOPEY1Q5JWR5 2465 aa0.34□□□□□ -2.36
RFC3-203ENST00000616236 HECTD1Q9ULT8 2610 aa0.34□□□□□ -2.36
RFC3-203ENST00000616236 STAB2Q8WWQ8 2551 aa0.34□□□□□ -2.36
RFC3-203ENST00000616236 ACANP16112 2415 aa0.34□□□□□ -2.36
RFC3-203ENST00000616236 COL7A1Q02388 2944 aa0.34□□□□□ -2.36
RFC3-203ENST00000616236 ACACBO00763 2458 aa0.33□□□□□ -2.36
RFC3-203ENST00000616236 H0YGG7 62 aa0.33□□□□□ -2.36
RFC3-203ENST00000616236 LY75O60449 1722 aa0.33□□□□□ -2.36
RFC3-203ENST00000616236 CCDC168Q8NDH2 2452 aa0.32□□□□□ -2.36
RFC3-203ENST00000616236 ANKRD11Q6UB99 2663 aaPredicted RBP0.32□□□□□ -2.36
RFC3-203ENST00000616236 FASNP49327 2511 aaKnown RBP0.32□□□□□ -2.36
RFC3-203ENST00000616236 LRRK2Q5S007 2527 aa0.32□□□□□ -2.36
RFC3-203ENST00000616236 NBEAL2Q6ZNJ1 2754 aa0.32□□□□□ -2.36
RFC3-203ENST00000616236 NBASA2RRP1 2371 aa0.31□□□□□ -2.36
RFC3-203ENST00000616236 BIRC6Q9NR09 4857 aa0.31□□□□□ -2.36
RFC3-203ENST00000616236 HSPG2P98160 4391 aa0.3□□□□□ -2.36
RFC3-203ENST00000616236 FLNCQ14315 2725 aa0.3□□□□□ -2.36
RFC3-203ENST00000616236 ALS2Q96Q42 1657 aa0.3□□□□□ -2.36
RFC3-203ENST00000616236 PCNX1Q96RV3 2341 aa0.3□□□□□ -2.36
RFC3-203ENST00000616236 ITPR3Q14573 2671 aa0.3□□□□□ -2.36
RFC3-203ENST00000616236 HECTD4Q9Y4D8 3996 aa0.29□□□□□ -2.36
RFC3-203ENST00000616236 FLNBO75369 2602 aaKnown RBP0.29□□□□□ -2.36
RFC3-203ENST00000616236 ITSN2Q9NZM3 1697 aa0.29□□□□□ -2.36
RFC3-203ENST00000616236 ZANQ9Y493 2812 aa0.29□□□□□ -2.36
RFC3-203ENST00000616236 EPG5Q9HCE0 2579 aa0.29□□□□□ -2.36
RFC3-203ENST00000616236 TNRC18O15417 2968 aaPredicted RBP0.29□□□□□ -2.36
RFC3-203ENST00000616236 COL12A1Q99715 3063 aa0.29□□□□□ -2.36
RFC3-203ENST00000616236 HIVEP1P15822 2718 aa0.29□□□□□ -2.36
RFC3-203ENST00000616236 ABCA10Q8WWZ4 1543 aa0.28□□□□□ -2.36
RFC3-203ENST00000616236 WDFY4Q6ZS81 3184 aa0.28□□□□□ -2.36
RFC3-203ENST00000616236 MINOS1Q5TGZ0 78 aa0.28□□□□□ -2.36
RFC3-203ENST00000616236 SMIM5Q71RC9 77 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms