RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 C20orf166-AS1Q96NR2 134 aa5.86□□□□□ -1.47
COL12A1-211ENST00000615798 SMR3AQ99954 134 aa5.86□□□□□ -1.47
COL12A1-211ENST00000615798 CHD6Q8TD26 2715 aa5.85□□□□□ -1.47
COL12A1-211ENST00000615798 ZNF292O60281 2723 aa5.84□□□□□ -1.47
COL12A1-211ENST00000615798 CFAP46Q8IYW2 2715 aa5.84□□□□□ -1.47
COL12A1-211ENST00000615798 SPATA8Q6RVD6 105 aa5.83□□□□□ -1.48
COL12A1-211ENST00000615798 HTTP42858 3142 aa5.82□□□□□ -1.48
COL12A1-211ENST00000615798 R4GN34 69 aa5.82□□□□□ -1.48
COL12A1-211ENST00000615798 FLNAP21333 2647 aaKnown RBP5.81□□□□□ -1.48
COL12A1-211ENST00000615798 ZCCHC13Q8WW36 166 aaKnown RBP5.81□□□□□ -1.48
COL12A1-211ENST00000615798 A0A087X002 238 aa5.8□□□□□ -1.48
COL12A1-211ENST00000615798 HELZ2Q9BYK8 2649 aaKnown RBP5.79□□□□□ -1.48
COL12A1-211ENST00000615798 UTRNP46939 3433 aa5.79□□□□□ -1.48
COL12A1-211ENST00000615798 Q5W150 140 aa5.78□□□□□ -1.48
COL12A1-211ENST00000615798 Q6ZR54 194 aa5.78□□□□□ -1.48
COL12A1-211ENST00000615798 MAST4O15021 2626 aa5.78□□□□□ -1.48
COL12A1-211ENST00000615798 Q6ZSA8 131 aa5.78□□□□□ -1.48
COL12A1-211ENST00000615798 MMP24-AS1A0A0U1RRL7 71 aa5.77□□□□□ -1.49
COL12A1-211ENST00000615798 ATRQ13535 2644 aa5.76□□□□□ -1.49
COL12A1-211ENST00000615798 KRTAP1-3Q8IUG1 177 aa5.74□□□□□ -1.49
COL12A1-211ENST00000615798 Q8NDZ9 215 aa5.74□□□□□ -1.49
COL12A1-211ENST00000615798 PCNTO95613 3336 aa5.74□□□□□ -1.49
COL12A1-211ENST00000615798 UNC79Q9P2D8 2635 aa5.73□□□□□ -1.49
COL12A1-211ENST00000615798 KRTAP24-1Q3LI83 254 aa5.73□□□□□ -1.49
COL12A1-211ENST00000615798 ANAPC11Q9NYG5 84 aa5.72□□□□□ -1.49
COL12A1-211ENST00000615798 ITPR3Q14573 2671 aa5.71□□□□□ -1.5
COL12A1-211ENST00000615798 M0QZ58 72 aa5.7□□□□□ -1.5
COL12A1-211ENST00000615798 SPRR1AP35321 89 aa5.7□□□□□ -1.5
COL12A1-211ENST00000615798 KRTAP1-1Q07627 177 aa5.7□□□□□ -1.5
COL12A1-211ENST00000615798 C5orf42Q9H799 3197 aa5.68□□□□□ -1.5
COL12A1-211ENST00000615798 CASC10Q5T4H9 136 aa5.67□□□□□ -1.5
COL12A1-211ENST00000615798 M0R2T5 61 aa5.66□□□□□ -1.5
COL12A1-211ENST00000615798 SPRR1BP22528 89 aa5.66□□□□□ -1.5
COL12A1-211ENST00000615798 C10orf95Q9H7T3 257 aa5.65□□□□□ -1.5
COL12A1-211ENST00000615798 PP632Q6XCG6 107 aa5.65□□□□□ -1.51
COL12A1-211ENST00000615798 KRTAP10-11P60412 298 aa5.65□□□□□ -1.51
COL12A1-211ENST00000615798 PANO1I0J062 215 aa5.65□□□□□ -1.51
COL12A1-211ENST00000615798 KRTAP10-3P60369 221 aa5.64□□□□□ -1.51
COL12A1-211ENST00000615798 A0A0C4DFX4 3053 aa5.64□□□□□ -1.51
COL12A1-211ENST00000615798 ADM2Q7Z4H4 148 aa5.64□□□□□ -1.51
COL12A1-211ENST00000615798 COL6A5A8TX70 2615 aa5.63□□□□□ -1.51
COL12A1-211ENST00000615798 IGSF10Q6WRI0 2623 aa5.63□□□□□ -1.51
COL12A1-211ENST00000615798 GCN1Q92616 2671 aaKnown RBP5.63□□□□□ -1.51
COL12A1-211ENST00000615798 RANBP2P49792 3224 aaKnown RBP5.63□□□□□ -1.51
COL12A1-211ENST00000615798 K7EIL1 84 aa5.62□□□□□ -1.51
COL12A1-211ENST00000615798 A8MUU9 505 aa5.61□□□□□ -1.51
COL12A1-211ENST00000615798 A0A087WTM6 91 aa5.61□□□□□ -1.51
COL12A1-211ENST00000615798 WWC2-AS2Q96NR7 200 aa5.6□□□□□ -1.51
COL12A1-211ENST00000615798 LINC00472Q9H8W2 130 aa5.6□□□□□ -1.51
COL12A1-211ENST00000615798 FLNBO75369 2602 aaKnown RBP5.59□□□□□ -1.52
COL12A1-211ENST00000615798 TEP1Q99973 2627 aaKnown RBP5.56□□□□□ -1.52
COL12A1-211ENST00000615798 NOTCH2NLQ7Z3S9 236 aa5.54□□□□□ -1.52
COL12A1-211ENST00000615798 KRTAP11-1Q8IUC1 163 aa5.53□□□□□ -1.52
COL12A1-211ENST00000615798 ITPR2Q14571 2701 aa5.51□□□□□ -1.53
COL12A1-211ENST00000615798 KMT2BQ9UMN6 2715 aaPredicted RBP5.51□□□□□ -1.53
COL12A1-211ENST00000615798 PLAC8Q9NZF1 115 aa5.51□□□□□ -1.53
COL12A1-211ENST00000615798 KRTAP26-1Q6PEX3 210 aa5.51□□□□□ -1.53
COL12A1-211ENST00000615798 MGAQ8IWI9 3026 aa5.49□□□□□ -1.53
COL12A1-211ENST00000615798 KRTAP4-16G5E9R7 235 aaPredicted RBP5.49□□□□□ -1.53
COL12A1-211ENST00000615798 LAMA3Q16787 3333 aa5.48□□□□□ -1.53
COL12A1-211ENST00000615798 LAMA2P24043 3122 aaKnown RBP5.48□□□□□ -1.53
COL12A1-211ENST00000615798 A8MU10 97 aa5.48□□□□□ -1.53
COL12A1-211ENST00000615798 SMR3BP02814 79 aaPredicted RBP5.46□□□□□ -1.53
COL12A1-211ENST00000615798 MKI67P46013 3256 aaKnown RBP5.46□□□□□ -1.54
COL12A1-211ENST00000615798 LCE6AA0A183 80 aa5.46□□□□□ -1.54
COL12A1-211ENST00000615798 TNP1P09430 55 aa5.45□□□□□ -1.54
COL12A1-211ENST00000615798 SETXQ7Z333 2677 aaKnown RBP5.44□□□□□ -1.54
COL12A1-211ENST00000615798 KRTAP29-1A8MX34 341 aaPredicted RBP5.41□□□□□ -1.54
COL12A1-211ENST00000615798 P0C880 135 aa5.41□□□□□ -1.54
COL12A1-211ENST00000615798 UTP20O75691 2785 aaKnown RBP5.41□□□□□ -1.54
COL12A1-211ENST00000615798 CFAP54Q96N23 3096 aa5.41□□□□□ -1.54
COL12A1-211ENST00000615798 TEX15Q9BXT5 2789 aa5.41□□□□□ -1.54
COL12A1-211ENST00000615798 APCP25054 2843 aa5.4□□□□□ -1.54
COL12A1-211ENST00000615798 DSPP15924 2871 aaKnown RBP5.4□□□□□ -1.55
COL12A1-211ENST00000615798 BRCA2P51587 3418 aa5.39□□□□□ -1.55
COL12A1-211ENST00000615798 VPS13AQ96RL7 3174 aa5.38□□□□□ -1.55
COL12A1-211ENST00000615798 FLNCQ14315 2725 aa5.37□□□□□ -1.55
COL12A1-211ENST00000615798 TRIOO75962 3097 aa5.36□□□□□ -1.55
COL12A1-211ENST00000615798 RPS29P62273 56 aaKnown RBP5.35□□□□□ -1.55
COL12A1-211ENST00000615798 FRYQ5TBA9 3013 aa5.34□□□□□ -1.55
COL12A1-211ENST00000615798 WDFY4Q6ZS81 3184 aa5.32□□□□□ -1.56
COL12A1-211ENST00000615798 ITPR1Q14643 2758 aa5.32□□□□□ -1.56
COL12A1-211ENST00000615798 MAP1AP78559 2803 aaPredicted RBP5.3□□□□□ -1.56
COL12A1-211ENST00000615798 CDH23Q9H251 3354 aa5.29□□□□□ -1.56
COL12A1-211ENST00000615798 UBR5O95071 2799 aaPredicted RBP5.28□□□□□ -1.56
COL12A1-211ENST00000615798 NIPBLQ6KC79 2804 aaeCLIP5.27□□□□□ -1.57
COL12A1-211ENST00000615798 KRTAP1-5Q9BYS1 174 aa5.27□□□□□ -1.57
COL12A1-211ENST00000615798 NBEAL2Q6ZNJ1 2754 aa5.25□□□□□ -1.57
COL12A1-211ENST00000615798 UNC80Q8N2C7 3258 aa5.24□□□□□ -1.57
COL12A1-211ENST00000615798 PRUNE2Q8WUY3 3088 aa5.23□□□□□ -1.57
COL12A1-211ENST00000615798 XIRP2A4UGR9 3374 aa5.23□□□□□ -1.57
COL12A1-211ENST00000615798 NBEAQ8NFP9 2946 aa5.23□□□□□ -1.57
COL12A1-211ENST00000615798 Q5VSD8 79 aa5.23□□□□□ -1.57
COL12A1-211ENST00000615798 KRTAP13-1Q8IUC0 172 aa5.22□□□□□ -1.57
COL12A1-211ENST00000615798 VCANP13611 3396 aa5.22□□□□□ -1.57
COL12A1-211ENST00000615798 LAMA1P25391 3075 aa5.22□□□□□ -1.57
COL12A1-211ENST00000615798 Q6ZRN7 208 aaPredicted RBP5.18□□□□□ -1.58
COL12A1-211ENST00000615798 ADGRG4Q8IZF6 3080 aa5.18□□□□□ -1.58
COL12A1-211ENST00000615798 TENM3Q9P273 2699 aa5.18□□□□□ -1.58
COL12A1-211ENST00000615798 FRYLO94915 3013 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms