RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 SPRR1AP35321 89 aa11.16□□□□□ -0.62
GABPB1-212ENST00000615671 PRRC2CQ9Y520 2896 aaKnown RBP11.15□□□□□ -0.62
GABPB1-212ENST00000615671 PLAC4Q8WY50 150 aa11.15□□□□□ -0.62
GABPB1-212ENST00000615671 ADM2Q7Z4H4 148 aa11.14□□□□□ -0.63
GABPB1-212ENST00000615671 LINC00472Q9H8W2 130 aa11.14□□□□□ -0.63
GABPB1-212ENST00000615671 LINC01558Q9Y6Z2 57 aa11.12□□□□□ -0.63
GABPB1-212ENST00000615671 Q5XG85 94 aa11.11□□□□□ -0.63
GABPB1-212ENST00000615671 PANO1I0J062 215 aa11.11□□□□□ -0.63
GABPB1-212ENST00000615671 FLNAP21333 2647 aaKnown RBP11.1□□□□□ -0.63
GABPB1-212ENST00000615671 KRTAP26-1Q6PEX3 210 aa11.09□□□□□ -0.63
GABPB1-212ENST00000615671 SPATA8Q6RVD6 105 aa11.07□□□□□ -0.64
GABPB1-212ENST00000615671 ITPR3Q14573 2671 aa11.07□□□□□ -0.64
GABPB1-212ENST00000615671 H1FX-AS1Q4G0G2 97 aa11.04□□□□□ -0.64
GABPB1-212ENST00000615671 H3BS24 57 aa11.02□□□□□ -0.64
GABPB1-212ENST00000615671 SPRR1BP22528 89 aa11□□□□□ -0.65
GABPB1-212ENST00000615671 PCNTO95613 3336 aa11□□□□□ -0.65
GABPB1-212ENST00000615671 RPL37P61927 97 aaKnown RBP11□□□□□ -0.65
GABPB1-212ENST00000615671 Q5VV11 94 aa11□□□□□ -0.65
GABPB1-212ENST00000615671 A0A087X002 238 aa10.99□□□□□ -0.65
GABPB1-212ENST00000615671 FP248Q71RG6 208 aaPredicted RBP10.99□□□□□ -0.65
GABPB1-212ENST00000615671 OXTP01178 125 aa10.98□□□□□ -0.65
GABPB1-212ENST00000615671 Q6ZR54 194 aa10.98□□□□□ -0.65
GABPB1-212ENST00000615671 ROMO1P60602 79 aa10.98□□□□□ -0.65
GABPB1-212ENST00000615671 ATRQ13535 2644 aa10.95□□□□□ -0.66
GABPB1-212ENST00000615671 A0A0A0MQY5 61 aa10.93□□□□□ -0.66
GABPB1-212ENST00000615671 HELZ2Q9BYK8 2649 aaKnown RBP10.9□□□□□ -0.67
GABPB1-212ENST00000615671 MAST4O15021 2626 aa10.89□□□□□ -0.67
GABPB1-212ENST00000615671 MKI67P46013 3256 aaKnown RBP10.85□□□□□ -0.67
GABPB1-212ENST00000615671 CFAP46Q8IYW2 2715 aa10.83□□□□□ -0.68
GABPB1-212ENST00000615671 NOTCH2NLQ7Z3S9 236 aa10.82□□□□□ -0.68
GABPB1-212ENST00000615671 CHD7Q9P2D1 2997 aa10.82□□□□□ -0.68
GABPB1-212ENST00000615671 CFAP54Q96N23 3096 aa10.81□□□□□ -0.68
GABPB1-212ENST00000615671 KRTAP11-1Q8IUC1 163 aa10.75□□□□□ -0.69
GABPB1-212ENST00000615671 FLG2Q5D862 2391 aaPredicted RBP10.71□□□□□ -0.7
GABPB1-212ENST00000615671 A8MUU9 505 aa10.7□□□□□ -0.7
GABPB1-212ENST00000615671 A8MU10 97 aa10.69□□□□□ -0.7
GABPB1-212ENST00000615671 KRTAP4-16G5E9R7 235 aaPredicted RBP10.68□□□□□ -0.7
GABPB1-212ENST00000615671 C20orf166-AS1Q96NR2 134 aa10.67□□□□□ -0.7
GABPB1-212ENST00000615671 XIRP2A4UGR9 3374 aa10.66□□□□□ -0.7
GABPB1-212ENST00000615671 A0A0C4DFX4 3053 aa10.65□□□□□ -0.7
GABPB1-212ENST00000615671 LAMA3Q16787 3333 aa10.64□□□□□ -0.71
GABPB1-212ENST00000615671 TEX15Q9BXT5 2789 aa10.63□□□□□ -0.71
GABPB1-212ENST00000615671 BRCA2P51587 3418 aa10.62□□□□□ -0.71
GABPB1-212ENST00000615671 MGAQ8IWI9 3026 aa10.61□□□□□ -0.71
GABPB1-212ENST00000615671 CHD6Q8TD26 2715 aa10.59□□□□□ -0.71
GABPB1-212ENST00000615671 AKAP13Q12802 2813 aa10.58□□□□□ -0.72
GABPB1-212ENST00000615671 STAB1Q9NY15 2570 aa10.58□□□□□ -0.72
GABPB1-212ENST00000615671 KRTAP29-1A8MX34 341 aaPredicted RBP10.57□□□□□ -0.72
GABPB1-212ENST00000615671 Q6ZRN7 208 aaPredicted RBP10.53□□□□□ -0.72
GABPB1-212ENST00000615671 KRTAP13-2Q52LG2 175 aa10.53□□□□□ -0.72
GABPB1-212ENST00000615671 TEP1Q99973 2627 aaKnown RBP10.52□□□□□ -0.72
GABPB1-212ENST00000615671 TRIOO75962 3097 aa10.52□□□□□ -0.73
GABPB1-212ENST00000615671 NBEAL1Q6ZS30 2694 aa10.52□□□□□ -0.73
GABPB1-212ENST00000615671 RANBP2P49792 3224 aaKnown RBP10.5□□□□□ -0.73
GABPB1-212ENST00000615671 CELSR3Q9NYQ7 3312 aa10.47□□□□□ -0.73
GABPB1-212ENST00000615671 A0A1B0GVY2 172 aa10.46□□□□□ -0.74
GABPB1-212ENST00000615671 HTTP42858 3142 aa10.46□□□□□ -0.74
GABPB1-212ENST00000615671 KRTAP7-1Q8IUC3 87 aa10.45□□□□□ -0.74
GABPB1-212ENST00000615671 PRUNE2Q8WUY3 3088 aa10.45□□□□□ -0.74
GABPB1-212ENST00000615671 CENPEQ02224 2701 aa10.45□□□□□ -0.74
GABPB1-212ENST00000615671 LAMA2P24043 3122 aaKnown RBP10.44□□□□□ -0.74
GABPB1-212ENST00000615671 WDFY4Q6ZS81 3184 aa10.44□□□□□ -0.74
GABPB1-212ENST00000615671 DMBT1Q9UGM3 2413 aaPredicted RBP10.41□□□□□ -0.74
GABPB1-212ENST00000615671 CHD9Q3L8U1 2897 aa10.4□□□□□ -0.75
GABPB1-212ENST00000615671 RPS29P62273 56 aaKnown RBP10.38□□□□□ -0.75
GABPB1-212ENST00000615671 UNC80Q8N2C7 3258 aa10.37□□□□□ -0.75
GABPB1-212ENST00000615671 SETXQ7Z333 2677 aaKnown RBP10.36□□□□□ -0.75
GABPB1-212ENST00000615671 CDH23Q9H251 3354 aa10.36□□□□□ -0.75
GABPB1-212ENST00000615671 FREM2Q5SZK8 3169 aa10.35□□□□□ -0.75
GABPB1-212ENST00000615671 ASB16-AS1Q495Z4 193 aa10.34□□□□□ -0.75
GABPB1-212ENST00000615671 C10orf95Q9H7T3 257 aa10.33□□□□□ -0.76
GABPB1-212ENST00000615671 FRYQ5TBA9 3013 aa10.31□□□□□ -0.76
GABPB1-212ENST00000615671 KRTAP25-1Q3LHN0 102 aa10.31□□□□□ -0.76
GABPB1-212ENST00000615671 UNC79Q9P2D8 2635 aa10.3□□□□□ -0.76
GABPB1-212ENST00000615671 GCN1Q92616 2671 aaKnown RBP10.3□□□□□ -0.76
GABPB1-212ENST00000615671 TNP1P09430 55 aa10.29□□□□□ -0.76
GABPB1-212ENST00000615671 BAHCC1Q9P281 2608 aa10.27□□□□□ -0.76
GABPB1-212ENST00000615671 KRTAP10-8P60410 259 aa10.26□□□□□ -0.77
GABPB1-212ENST00000615671 COL6A5A8TX70 2615 aa10.24□□□□□ -0.77
GABPB1-212ENST00000615671 NBEAL2Q6ZNJ1 2754 aa10.23□□□□□ -0.77
GABPB1-212ENST00000615671 DNAH14Q0VDD8 3507 aa10.23□□□□□ -0.77
GABPB1-212ENST00000615671 KRTAP13-1Q8IUC0 172 aa10.22□□□□□ -0.77
GABPB1-212ENST00000615671 KRTAP16-1A8MUX0 517 aa10.19□□□□□ -0.78
GABPB1-212ENST00000615671 A6NN06 94 aa10.16□□□□□ -0.78
GABPB1-212ENST00000615671 NDUFAF8A1L188 74 aa10.16□□□□□ -0.78
GABPB1-212ENST00000615671 STAB2Q8WWQ8 2551 aa10.14□□□□□ -0.79
GABPB1-212ENST00000615671 COL6A3P12111 3177 aa10.13□□□□□ -0.79
GABPB1-212ENST00000615671 CRYBG3Q68DQ2 2970 aa10.12□□□□□ -0.79
GABPB1-212ENST00000615671 SZT2Q5T011 3432 aa10.12□□□□□ -0.79
GABPB1-212ENST00000615671 VPS13AQ96RL7 3174 aa10.09□□□□□ -0.79
GABPB1-212ENST00000615671 DSPP15924 2871 aaKnown RBP10.09□□□□□ -0.79
GABPB1-212ENST00000615671 NOTCH1P46531 2555 aa10.08□□□□□ -0.8
GABPB1-212ENST00000615671 XP32Q5T750 250 aa10.05□□□□□ -0.8
GABPB1-212ENST00000615671 ITPR2Q14571 2701 aa10.04□□□□□ -0.8
GABPB1-212ENST00000615671 TRANK1O15050 2925 aa10.04□□□□□ -0.8
GABPB1-212ENST00000615671 KRTAP10-10P60014 251 aa10.03□□□□□ -0.8
GABPB1-212ENST00000615671 ZNF292O60281 2723 aa10.03□□□□□ -0.8
GABPB1-212ENST00000615671 CFAP47Q6ZTR5 3102 aa9.98□□□□□ -0.81
GABPB1-212ENST00000615671 IGSF10Q6WRI0 2623 aa9.97□□□□□ -0.81
GABPB1-212ENST00000615671 MAP1AP78559 2803 aaPredicted RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms