RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CD164Q04900 197 aa5.91□□□□□ -1.46
CLTCL1-208ENST00000615606 KLKP1Q107X0 134 aa5.91□□□□□ -1.46
CLTCL1-208ENST00000615606 A0A1W2PNM2 257 aa5.91□□□□□ -1.46
CLTCL1-208ENST00000615606 A8MUN3 132 aa5.91□□□□□ -1.46
CLTCL1-208ENST00000615606 LAMA1P25391 3075 aa5.91□□□□□ -1.46
CLTCL1-208ENST00000615606 KRTAP26-1Q6PEX3 210 aa5.89□□□□□ -1.47
CLTCL1-208ENST00000615606 ATMQ13315 3056 aa5.89□□□□□ -1.47
CLTCL1-208ENST00000615606 COX6B2Q6YFQ2 88 aa5.89□□□□□ -1.47
CLTCL1-208ENST00000615606 CYP4F30PQ9H0H9 118 aa5.89□□□□□ -1.47
CLTCL1-208ENST00000615606 DMXL2Q8TDJ6 3036 aa5.88□□□□□ -1.47
CLTCL1-208ENST00000615606 ITPR1Q14643 2758 aa5.88□□□□□ -1.47
CLTCL1-208ENST00000615606 IGLV8-61A0A075B6I0 122 aa5.88□□□□□ -1.47
CLTCL1-208ENST00000615606 FRYQ5TBA9 3013 aa5.87□□□□□ -1.47
CLTCL1-208ENST00000615606 COA5Q86WW8 74 aa5.87□□□□□ -1.47
CLTCL1-208ENST00000615606 PRR26Q8N8Z3 221 aa5.87□□□□□ -1.47
CLTCL1-208ENST00000615606 SPRR1AP35321 89 aa5.87□□□□□ -1.47
CLTCL1-208ENST00000615606 HIVEP1P15822 2718 aa5.87□□□□□ -1.47
CLTCL1-208ENST00000615606 H7BZZ5 65 aa5.86□□□□□ -1.47
CLTCL1-208ENST00000615606 Q6ZR54 194 aa5.86□□□□□ -1.47
CLTCL1-208ENST00000615606 COL12A1Q99715 3063 aa5.86□□□□□ -1.47
CLTCL1-208ENST00000615606 UTP20O75691 2785 aaKnown RBP5.83□□□□□ -1.48
CLTCL1-208ENST00000615606 KRTAP10-1P60331 282 aa5.83□□□□□ -1.48
CLTCL1-208ENST00000615606 VCANP13611 3396 aa5.83□□□□□ -1.48
CLTCL1-208ENST00000615606 KMT2BQ9UMN6 2715 aaPredicted RBP5.83□□□□□ -1.48
CLTCL1-208ENST00000615606 CELSR3Q9NYQ7 3312 aa5.83□□□□□ -1.48
CLTCL1-208ENST00000615606 NSD1Q96L73 2696 aaPredicted RBP5.83□□□□□ -1.48
CLTCL1-208ENST00000615606 LINC01600Q96MT4 127 aa5.83□□□□□ -1.48
CLTCL1-208ENST00000615606 KRTAP10-2P60368 255 aa5.82□□□□□ -1.48
CLTCL1-208ENST00000615606 Q8NDZ9 215 aa5.82□□□□□ -1.48
CLTCL1-208ENST00000615606 EYSQ5T1H1 3165 aa5.82□□□□□ -1.48
CLTCL1-208ENST00000615606 IGLV7-46A0A075B6I9 117 aa5.82□□□□□ -1.48
CLTCL1-208ENST00000615606 APCP25054 2843 aa5.81□□□□□ -1.48
CLTCL1-208ENST00000615606 UQCR11O14957 56 aa5.8□□□□□ -1.48
CLTCL1-208ENST00000615606 RBM12B-AS1Q9P1G2 102 aa5.8□□□□□ -1.48
CLTCL1-208ENST00000615606 NBEAL1Q6ZS30 2694 aa5.8□□□□□ -1.48
CLTCL1-208ENST00000615606 SPRR1BP22528 89 aa5.8□□□□□ -1.48
CLTCL1-208ENST00000615606 Q5VSD8 79 aa5.8□□□□□ -1.48
CLTCL1-208ENST00000615606 DNAH14Q0VDD8 3507 aa5.79□□□□□ -1.48
CLTCL1-208ENST00000615606 SPTBN5Q9NRC6 3674 aaKnown RBP5.78□□□□□ -1.48
CLTCL1-208ENST00000615606 BOD1L1Q8NFC6 3051 aa5.78□□□□□ -1.48
CLTCL1-208ENST00000615606 TACC2O95359 2948 aa5.77□□□□□ -1.49
CLTCL1-208ENST00000615606 NBEAL2Q6ZNJ1 2754 aa5.77□□□□□ -1.49
CLTCL1-208ENST00000615606 DMXL1Q9Y485 3027 aa5.76□□□□□ -1.49
CLTCL1-208ENST00000615606 SPINT4Q6UDR6 99 aa5.76□□□□□ -1.49
CLTCL1-208ENST00000615606 ADGRG4Q8IZF6 3080 aa5.76□□□□□ -1.49
CLTCL1-208ENST00000615606 Q6ZSA8 131 aa5.75□□□□□ -1.49
CLTCL1-208ENST00000615606 MIR22HGQ0VDD5 57 aa5.74□□□□□ -1.49
CLTCL1-208ENST00000615606 KTN1-AS1Q86SY8 53 aa5.74□□□□□ -1.49
CLTCL1-208ENST00000615606 NBEAQ8NFP9 2946 aa5.74□□□□□ -1.49
CLTCL1-208ENST00000615606 KALRNO60229 2985 aa5.72□□□□□ -1.49
CLTCL1-208ENST00000615606 REV3LO60673 3130 aa5.72□□□□□ -1.49
CLTCL1-208ENST00000615606 Q6ZRN7 208 aaPredicted RBP5.72□□□□□ -1.49
CLTCL1-208ENST00000615606 LRBAP50851 2863 aa5.71□□□□□ -1.5
CLTCL1-208ENST00000615606 SPANXA2-OT1Q8N9U9 137 aa5.71□□□□□ -1.5
CLTCL1-208ENST00000615606 LCA10Q71F78 164 aa5.71□□□□□ -1.5
CLTCL1-208ENST00000615606 PANO1I0J062 215 aa5.7□□□□□ -1.5
CLTCL1-208ENST00000615606 FREM2Q5SZK8 3169 aa5.69□□□□□ -1.5
CLTCL1-208ENST00000615606 ZZEF1O43149 2961 aa5.69□□□□□ -1.5
CLTCL1-208ENST00000615606 OCR1Q9BZK8 76 aa5.69□□□□□ -1.5
CLTCL1-208ENST00000615606 LINC00483Q53H64 154 aa5.68□□□□□ -1.5
CLTCL1-208ENST00000615606 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
CLTCL1-208ENST00000615606 KRTAP4-16G5E9R7 235 aaPredicted RBP5.66□□□□□ -1.5
CLTCL1-208ENST00000615606 TENM4Q6N022 2769 aa5.65□□□□□ -1.5
CLTCL1-208ENST00000615606 CRIPTQ9P021 101 aa5.65□□□□□ -1.5
CLTCL1-208ENST00000615606 MMP24-AS1A0A0U1RRL7 71 aa5.65□□□□□ -1.51
CLTCL1-208ENST00000615606 Q8N1X5 172 aa5.65□□□□□ -1.51
CLTCL1-208ENST00000615606 LINC00472Q9H8W2 130 aa5.65□□□□□ -1.51
CLTCL1-208ENST00000615606 Q1T7F1 81 aa5.64□□□□□ -1.51
CLTCL1-208ENST00000615606 ZCCHC13Q8WW36 166 aaKnown RBP5.64□□□□□ -1.51
CLTCL1-208ENST00000615606 NIPBLQ6KC79 2804 aaeCLIP5.64□□□□□ -1.51
CLTCL1-208ENST00000615606 SPEGQ15772 3267 aa5.64□□□□□ -1.51
CLTCL1-208ENST00000615606 USP34Q70CQ2 3546 aa5.64□□□□□ -1.51
CLTCL1-208ENST00000615606 SEC61BP60468 96 aaKnown RBP5.63□□□□□ -1.51
CLTCL1-208ENST00000615606 STAB2Q8WWQ8 2551 aa5.62□□□□□ -1.51
CLTCL1-208ENST00000615606 FP248Q71RG6 208 aaPredicted RBP5.62□□□□□ -1.51
CLTCL1-208ENST00000615606 ZANQ9Y493 2812 aa5.6□□□□□ -1.51
CLTCL1-208ENST00000615606 OXTP01178 125 aa5.6□□□□□ -1.51
CLTCL1-208ENST00000615606 HRNRQ86YZ3 2850 aaPredicted RBP5.59□□□□□ -1.51
CLTCL1-208ENST00000615606 Q5XG85 94 aa5.58□□□□□ -1.52
CLTCL1-208ENST00000615606 A0A0D9SG42 100 aa5.57□□□□□ -1.52
CLTCL1-208ENST00000615606 HRES1P13985 223 aa5.56□□□□□ -1.52
CLTCL1-208ENST00000615606 A0A087X002 238 aa5.56□□□□□ -1.52
CLTCL1-208ENST00000615606 M0R2T5 61 aa5.56□□□□□ -1.52
CLTCL1-208ENST00000615606 CYSTM1Q9H1C7 97 aa5.55□□□□□ -1.52
CLTCL1-208ENST00000615606 LINC01554Q52M75 96 aa5.55□□□□□ -1.52
CLTCL1-208ENST00000615606 Q75L30 129 aa5.54□□□□□ -1.52
CLTCL1-208ENST00000615606 KRTAP11-1Q8IUC1 163 aa5.54□□□□□ -1.52
CLTCL1-208ENST00000615606 SPINK7P58062 85 aa5.53□□□□□ -1.52
CLTCL1-208ENST00000615606 Q5W150 140 aa5.53□□□□□ -1.52
CLTCL1-208ENST00000615606 CRYBG3Q68DQ2 2970 aa5.53□□□□□ -1.52
CLTCL1-208ENST00000615606 KRTAP7-1Q8IUC3 87 aa5.53□□□□□ -1.52
CLTCL1-208ENST00000615606 RPS29P62273 56 aaKnown RBP5.52□□□□□ -1.53
CLTCL1-208ENST00000615606 Q8N9P0 234 aaPredicted RBP5.52□□□□□ -1.53
CLTCL1-208ENST00000615606 CELSR2Q9HCU4 2923 aa5.51□□□□□ -1.53
CLTCL1-208ENST00000615606 LOC400499M0QZD8 3231 aa5.5□□□□□ -1.53
CLTCL1-208ENST00000615606 CSAG1Q6PB30 78 aa5.5□□□□□ -1.53
CLTCL1-208ENST00000615606 LINC01558Q9Y6Z2 57 aa5.5□□□□□ -1.53
CLTCL1-208ENST00000615606 ASB16-AS1Q495Z4 193 aa5.49□□□□□ -1.53
CLTCL1-208ENST00000615606 KRTAP13-1Q8IUC0 172 aa5.48□□□□□ -1.53
CLTCL1-208ENST00000615606 A0A1B0GU33 70 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms