RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 NBPF19A0A087WUL8 3843 aa8.03□□□□□ -1.12
MSH6-213ENST00000614496 CHKB-CPT1BH3BT56 60 aa8.02□□□□□ -1.13
MSH6-213ENST00000614496 FAM229BQ4G0N7 80 aa8.02□□□□□ -1.13
MSH6-213ENST00000614496 C1orf64Q8NEQ6 169 aa8.02□□□□□ -1.13
MSH6-213ENST00000614496 C16orf90A8MZG2 172 aa8.02□□□□□ -1.13
MSH6-213ENST00000614496 DSCR10P59022 87 aa8.02□□□□□ -1.13
MSH6-213ENST00000614496 TENM4Q6N022 2769 aa8.01□□□□□ -1.13
MSH6-213ENST00000614496 IGHV6-1A0A0B4J1U7 121 aa8□□□□□ -1.13
MSH6-213ENST00000614496 PLA2G2DQ9UNK4 145 aa8□□□□□ -1.13
MSH6-213ENST00000614496 PRR15LQ9BU68 103 aa7.99□□□□□ -1.13
MSH6-213ENST00000614496 TENM3Q9P273 2699 aa7.98□□□□□ -1.13
MSH6-213ENST00000614496 K7EIL1 84 aa7.97□□□□□ -1.13
MSH6-213ENST00000614496 WIPF1O43516 503 aa7.96□□□□□ -1.13
MSH6-213ENST00000614496 hDV103S1A0JD37 113 aa7.96□□□□□ -1.13
MSH6-213ENST00000614496 A6NED7 52 aa7.96□□□□□ -1.13
MSH6-213ENST00000614496 PDZD2O15018 2839 aa7.96□□□□□ -1.14
MSH6-213ENST00000614496 SPRR4Q96PI1 79 aa7.95□□□□□ -1.14
MSH6-213ENST00000614496 IGLV5-37A0A075B6J1 123 aa7.94□□□□□ -1.14
MSH6-213ENST00000614496 A8MUN3 132 aa7.94□□□□□ -1.14
MSH6-213ENST00000614496 SPRR1AP35321 89 aa7.93□□□□□ -1.14
MSH6-213ENST00000614496 PKD1L1Q8TDX9 2849 aa7.93□□□□□ -1.14
MSH6-213ENST00000614496 OTOGQ6ZRI0 2925 aa7.93□□□□□ -1.14
MSH6-213ENST00000614496 PRR15Q8IV56 129 aa7.91□□□□□ -1.14
MSH6-213ENST00000614496 A8MWP4 228 aa7.9□□□□□ -1.14
MSH6-213ENST00000614496 MOBPQ13875 183 aa7.9□□□□□ -1.14
MSH6-213ENST00000614496 CIRBP-AS1Q8TBR5 109 aa7.9□□□□□ -1.14
MSH6-213ENST00000614496 MDFIQ99750 246 aa7.9□□□□□ -1.14
MSH6-213ENST00000614496 TRAV22A0A0B4J277 110 aa7.9□□□□□ -1.15
MSH6-213ENST00000614496 STAB2Q8WWQ8 2551 aa7.89□□□□□ -1.15
MSH6-213ENST00000614496 KRTAP4-16G5E9R7 235 aaPredicted RBP7.89□□□□□ -1.15
MSH6-213ENST00000614496 ZNF469Q96JG9 3925 aaPredicted RBP7.88□□□□□ -1.15
MSH6-213ENST00000614496 TNP2Q05952 138 aa7.88□□□□□ -1.15
MSH6-213ENST00000614496 RETNLBQ9BQ08 111 aa7.88□□□□□ -1.15
MSH6-213ENST00000614496 ANAPC11Q9NYG5 84 aa7.87□□□□□ -1.15
MSH6-213ENST00000614496 ZNF706Q9Y5V0 76 aaPredicted RBP7.87□□□□□ -1.15
MSH6-213ENST00000614496 KRTAP1-5Q9BYS1 174 aa7.87□□□□□ -1.15
MSH6-213ENST00000614496 KRTAP7-1Q8IUC3 87 aa7.86□□□□□ -1.15
MSH6-213ENST00000614496 NBDYA0A0U1RRE5 68 aa7.85□□□□□ -1.15
MSH6-213ENST00000614496 SPAG11AQ6PDA7 123 aa7.85□□□□□ -1.15
MSH6-213ENST00000614496 KMT2BQ9UMN6 2715 aaPredicted RBP7.84□□□□□ -1.15
MSH6-213ENST00000614496 FBN1P35555 2871 aaKnown RBP7.84□□□□□ -1.15
MSH6-213ENST00000614496 C9orf163Q8N9P6 203 aa7.84□□□□□ -1.15
MSH6-213ENST00000614496 NUPR2A6NF83 97 aa7.83□□□□□ -1.16
MSH6-213ENST00000614496 CNBPP62633 177 aaKnown RBP7.83□□□□□ -1.16
MSH6-213ENST00000614496 LIMD2Q9BT23 127 aa7.81□□□□□ -1.16
MSH6-213ENST00000614496 H3BPC8 53 aa7.81□□□□□ -1.16
MSH6-213ENST00000614496 LY6G6CO95867 125 aa7.81□□□□□ -1.16
MSH6-213ENST00000614496 IGLV5-52A0A0A0MRZ9 124 aa7.8□□□□□ -1.16
MSH6-213ENST00000614496 COA5Q86WW8 74 aa7.8□□□□□ -1.16
MSH6-213ENST00000614496 APLNQ9ULZ1 77 aa7.78□□□□□ -1.16
MSH6-213ENST00000614496 TRRAPQ9Y4A5 3859 aa7.78□□□□□ -1.16
MSH6-213ENST00000614496 TP53AIP1Q9HCN2 124 aa7.77□□□□□ -1.17
MSH6-213ENST00000614496 C8orf17Q9NRJ1 99 aa7.77□□□□□ -1.17
MSH6-213ENST00000614496 RTL8CO15255 209 aa7.76□□□□□ -1.17
MSH6-213ENST00000614496 KRTAP11-1Q8IUC1 163 aa7.75□□□□□ -1.17
MSH6-213ENST00000614496 Q1T7F1 81 aa7.75□□□□□ -1.17
MSH6-213ENST00000614496 CYP4F30PQ9H0H9 118 aa7.74□□□□□ -1.17
MSH6-213ENST00000614496 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.74□□□□□ -1.17
MSH6-213ENST00000614496 C4orf48Q5BLP8 95 aa7.74□□□□□ -1.17
MSH6-213ENST00000614496 MRPL34Q9BQ48 92 aaKnown RBP7.73□□□□□ -1.17
MSH6-213ENST00000614496 LINC00472Q9H8W2 130 aa7.72□□□□□ -1.17
MSH6-213ENST00000614496 ZCCHC13Q8WW36 166 aaKnown RBP7.72□□□□□ -1.17
MSH6-213ENST00000614496 PSORS1C2Q9UIG4 136 aa7.72□□□□□ -1.17
MSH6-213ENST00000614496 ANK3Q12955 4377 aaKnown RBP7.71□□□□□ -1.17
MSH6-213ENST00000614496 IGLV8-61A0A075B6I0 122 aa7.71□□□□□ -1.18
MSH6-213ENST00000614496 A0A1B0GVX0 72 aa7.71□□□□□ -1.18
MSH6-213ENST00000614496 PANO1I0J062 215 aa7.71□□□□□ -1.18
MSH6-213ENST00000614496 MMP24-AS1A0A0U1RRL7 71 aa7.7□□□□□ -1.18
MSH6-213ENST00000614496 C1orf134Q5TEV5 83 aa7.7□□□□□ -1.18
MSH6-213ENST00000614496 SPANXA2-OT1Q8N9U9 137 aa7.69□□□□□ -1.18
MSH6-213ENST00000614496 A0A087WTM6 91 aa7.69□□□□□ -1.18
MSH6-213ENST00000614496 AKAP9Q99996 3911 aa7.69□□□□□ -1.18
MSH6-213ENST00000614496 KRTAP29-1A8MX34 341 aaPredicted RBP7.67□□□□□ -1.18
MSH6-213ENST00000614496 H3BS24 57 aa7.66□□□□□ -1.18
MSH6-213ENST00000614496 ZNF861PO60384 105 aa7.66□□□□□ -1.18
MSH6-213ENST00000614496 Q8N9P0 234 aaPredicted RBP7.66□□□□□ -1.18
MSH6-213ENST00000614496 SPRR1BP22528 89 aa7.66□□□□□ -1.18
MSH6-213ENST00000614496 IGKV2D-30A0A075B6S6 120 aa7.65□□□□□ -1.18
MSH6-213ENST00000614496 IGKV2-30P06310 120 aa7.65□□□□□ -1.18
MSH6-213ENST00000614496 LCE6AA0A183 80 aa7.64□□□□□ -1.19
MSH6-213ENST00000614496 CD164Q04900 197 aa7.64□□□□□ -1.19
MSH6-213ENST00000614496 LOC101927531A0A1B0GV80 90 aa7.63□□□□□ -1.19
MSH6-213ENST00000614496 SPACA4Q8TDM5 124 aa7.63□□□□□ -1.19
MSH6-213ENST00000614496 SPINK1P00995 79 aa7.63□□□□□ -1.19
MSH6-213ENST00000614496 Q5VV11 94 aa7.63□□□□□ -1.19
MSH6-213ENST00000614496 PRR26Q8N8Z3 221 aa7.63□□□□□ -1.19
MSH6-213ENST00000614496 IGLV7-46A0A075B6I9 117 aa7.62□□□□□ -1.19
MSH6-213ENST00000614496 ACYP2P14621 99 aa7.6□□□□□ -1.19
MSH6-213ENST00000614496 TENM2Q9NT68 2774 aa7.6□□□□□ -1.19
MSH6-213ENST00000614496 LINC00313P59037 77 aa7.6□□□□□ -1.19
MSH6-213ENST00000614496 A8MU10 97 aa7.58□□□□□ -1.2
MSH6-213ENST00000614496 SRRM2Q9UQ35 2752 aaKnown RBP7.57□□□□□ -1.2
MSH6-213ENST00000614496 A0A1B0GU69 56 aa7.56□□□□□ -1.2
MSH6-213ENST00000614496 IGLV7-43P04211 117 aa7.56□□□□□ -1.2
MSH6-213ENST00000614496 A0A087X002 238 aa7.54□□□□□ -1.2
MSH6-213ENST00000614496 NOTCH2NLQ7Z3S9 236 aa7.54□□□□□ -1.2
MSH6-213ENST00000614496 WWC2-AS2Q96NR7 200 aa7.54□□□□□ -1.2
MSH6-213ENST00000614496 ATP11AUNQ6ZP68 121 aa7.53□□□□□ -1.2
MSH6-213ENST00000614496 HRES1P13985 223 aa7.53□□□□□ -1.2
MSH6-213ENST00000614496 C7orf65Q6ZTY9 151 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms