RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 HSD52Q0P140 79 aa10.16□□□□□ -0.78
SEMA3B-211ENST00000612509 MUC17Q685J3 4493 aa10.16□□□□□ -0.78
SEMA3B-211ENST00000612509 CD164Q04900 197 aa10.15□□□□□ -0.78
SEMA3B-211ENST00000612509 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.15□□□□□ -0.78
SEMA3B-211ENST00000612509 KRTAP13-3Q3SY46 172 aa10.14□□□□□ -0.79
SEMA3B-211ENST00000612509 F8WEM9 126 aa10.13□□□□□ -0.79
SEMA3B-211ENST00000612509 UQCR10Q9UDW1 63 aa10.13□□□□□ -0.79
SEMA3B-211ENST00000612509 PRO1854Q9UHT4 67 aa10.13□□□□□ -0.79
SEMA3B-211ENST00000612509 A0A0G2JQZ4 141 aa10.11□□□□□ -0.79
SEMA3B-211ENST00000612509 PPDPFLQ8WWR9 84 aa10.1□□□□□ -0.79
SEMA3B-211ENST00000612509 FAM218AQ96MZ4 157 aa10.1□□□□□ -0.79
SEMA3B-211ENST00000612509 H0YGX0 51 aa10.09□□□□□ -0.79
SEMA3B-211ENST00000612509 K7ERJ3 54 aa10.07□□□□□ -0.8
SEMA3B-211ENST00000612509 IGLV8-61A0A075B6I0 122 aa10.06□□□□□ -0.8
SEMA3B-211ENST00000612509 SNCGO76070 127 aa10.06□□□□□ -0.8
SEMA3B-211ENST00000612509 Q5XG85 94 aa10.06□□□□□ -0.8
SEMA3B-211ENST00000612509 TRIAP1O43715 76 aa10.05□□□□□ -0.8
SEMA3B-211ENST00000612509 Q6JHZ5 121 aa10.05□□□□□ -0.8
SEMA3B-211ENST00000612509 OCIAD2Q56VL3 154 aa10.04□□□□□ -0.8
SEMA3B-211ENST00000612509 CLEC2BQ92478 149 aa10.04□□□□□ -0.8
SEMA3B-211ENST00000612509 MUC2Q02817 5179 aa10.04□□□□□ -0.8
SEMA3B-211ENST00000612509 A0A1B0GX51 115 aa10.03□□□□□ -0.8
SEMA3B-211ENST00000612509 IGFL1Q6UW32 110 aa10.03□□□□□ -0.8
SEMA3B-211ENST00000612509 SNHG12Q9BXW3 62 aa10.03□□□□□ -0.8
SEMA3B-211ENST00000612509 H3BUT2 72 aa9.99□□□□□ -0.81
SEMA3B-211ENST00000612509 SMIM6P0DI80 62 aa9.99□□□□□ -0.81
SEMA3B-211ENST00000612509 PSMB2P49721 201 aa9.98□□□□□ -0.81
SEMA3B-211ENST00000612509 TRBV7-7A0A0K0K1E9 115 aa9.97□□□□□ -0.81
SEMA3B-211ENST00000612509 TCL1BO95988 128 aa9.97□□□□□ -0.81
SEMA3B-211ENST00000612509 C1orf195Q5TG92 126 aa9.97□□□□□ -0.81
SEMA3B-211ENST00000612509 XP32Q5T750 250 aa9.96□□□□□ -0.82
SEMA3B-211ENST00000612509 GHRHP01286 108 aa9.95□□□□□ -0.82
SEMA3B-211ENST00000612509 NDUFV3P56181 108 aaKnown RBP9.95□□□□□ -0.82
SEMA3B-211ENST00000612509 COX6CP09669 75 aa9.94□□□□□ -0.82
SEMA3B-211ENST00000612509 ASB16-AS1Q495Z4 193 aa9.94□□□□□ -0.82
SEMA3B-211ENST00000612509 DNAL4O96015 105 aa9.93□□□□□ -0.82
SEMA3B-211ENST00000612509 C9orf92A6NGG3 77 aa9.92□□□□□ -0.82
SEMA3B-211ENST00000612509 FABP2P12104 132 aa9.92□□□□□ -0.82
SEMA3B-211ENST00000612509 SEC61BP60468 96 aaKnown RBP9.91□□□□□ -0.82
SEMA3B-211ENST00000612509 A0A0U1RQV1 116 aa9.9□□□□□ -0.82
SEMA3B-211ENST00000612509 ORMDL1Q9P0S3 153 aa9.9□□□□□ -0.82
SEMA3B-211ENST00000612509 M0R143 59 aa9.89□□□□□ -0.83
SEMA3B-211ENST00000612509 H3BMG7 143 aa9.88□□□□□ -0.83
SEMA3B-211ENST00000612509 Q6Q795 121 aa9.88□□□□□ -0.83
SEMA3B-211ENST00000612509 H3BQ85 93 aa9.85□□□□□ -0.83
SEMA3B-211ENST00000612509 TEN1Q86WV5 123 aa9.85□□□□□ -0.83
SEMA3B-211ENST00000612509 FAT4Q6V0I7 4981 aa9.85□□□□□ -0.83
SEMA3B-211ENST00000612509 LOC105371267A0A1B0GV96 52 aa9.84□□□□□ -0.83
SEMA3B-211ENST00000612509 LST1O00453 97 aa9.84□□□□□ -0.83
SEMA3B-211ENST00000612509 TRACP01848 142 aa9.84□□□□□ -0.83
SEMA3B-211ENST00000612509 SCGB1C2P0DMR2 95 aa9.84□□□□□ -0.83
SEMA3B-211ENST00000612509 SS18L2Q9UHA2 77 aa9.83□□□□□ -0.84
SEMA3B-211ENST00000612509 TSTD3H0UI37 97 aa9.82□□□□□ -0.84
SEMA3B-211ENST00000612509 TMEM256-PLSCR3K7ERE1 68 aa9.82□□□□□ -0.84
SEMA3B-211ENST00000612509 A0A1B0GV72 72 aa9.81□□□□□ -0.84
SEMA3B-211ENST00000612509 A0A087WSZ3 146 aa9.8□□□□□ -0.84
SEMA3B-211ENST00000612509 KRTAP4-1Q9BYQ7 146 aa9.8□□□□□ -0.84
SEMA3B-211ENST00000612509 A0A1W2PNM2 257 aa9.79□□□□□ -0.84
SEMA3B-211ENST00000612509 UBE2V1Q13404 147 aa9.78□□□□□ -0.84
SEMA3B-211ENST00000612509 ANKRD29Q8N6D5 301 aa9.77□□□□□ -0.85
SEMA3B-211ENST00000612509 NAA38Q9BRA0 125 aaKnown RBP9.77□□□□□ -0.85
SEMA3B-211ENST00000612509 PCOTHQ58A44 107 aa9.75□□□□□ -0.85
SEMA3B-211ENST00000612509 RPL37P61927 97 aaKnown RBP9.74□□□□□ -0.85
SEMA3B-211ENST00000612509 TRBV7-4A0A0J9YYF1 115 aa9.72□□□□□ -0.85
SEMA3B-211ENST00000612509 ATXN8Q156A1 80 aa9.72□□□□□ -0.85
SEMA3B-211ENST00000612509 BATFQ16520 125 aa9.72□□□□□ -0.85
SEMA3B-211ENST00000612509 Q96NJ1 140 aa9.72□□□□□ -0.85
SEMA3B-211ENST00000612509 CCKP06307 115 aa9.7□□□□□ -0.86
SEMA3B-211ENST00000612509 BAALC-AS2P0C853 105 aa9.69□□□□□ -0.86
SEMA3B-211ENST00000612509 OBSCN-AS1Q96MR7 158 aa9.69□□□□□ -0.86
SEMA3B-211ENST00000612509 LCE2AQ5TA79 106 aaPredicted RBP9.68□□□□□ -0.86
SEMA3B-211ENST00000612509 RBM3P98179 157 aaKnown RBP9.67□□□□□ -0.86
SEMA3B-211ENST00000612509 LYRM7Q5U5X0 104 aa9.67□□□□□ -0.86
SEMA3B-211ENST00000612509 DSCR8Q96T75 97 aa9.65□□□□□ -0.86
SEMA3B-211ENST00000612509 SIGMAR1Q99720 223 aa9.65□□□□□ -0.86
SEMA3B-211ENST00000612509 VPS25Q9BRG1 176 aa9.64□□□□□ -0.87
SEMA3B-211ENST00000612509 Q75L30 129 aa9.62□□□□□ -0.87
SEMA3B-211ENST00000612509 TRBV20-1A0A075B6N2 111 aa9.6□□□□□ -0.87
SEMA3B-211ENST00000612509 C9JAW5 83 aa9.59□□□□□ -0.87
SEMA3B-211ENST00000612509 IGKV4-1P06312 121 aa9.59□□□□□ -0.87
SEMA3B-211ENST00000612509 LINC00472Q9H8W2 130 aa9.59□□□□□ -0.87
SEMA3B-211ENST00000612509 C9orf118A6NHY6 69 aa9.58□□□□□ -0.88
SEMA3B-211ENST00000612509 TAX1BP3O14907 124 aa9.58□□□□□ -0.88
SEMA3B-211ENST00000612509 JMJD7-PLA2G4BH0Y9G9 81 aa9.57□□□□□ -0.88
SEMA3B-211ENST00000612509 DSCR10P59022 87 aa9.57□□□□□ -0.88
SEMA3B-211ENST00000612509 DEFB116Q30KQ4 102 aa9.55□□□□□ -0.88
SEMA3B-211ENST00000612509 C20orf166-AS1Q96NR2 134 aa9.55□□□□□ -0.88
SEMA3B-211ENST00000612509 A0A1W2PPM0 123 aa9.54□□□□□ -0.88
SEMA3B-211ENST00000612509 KRTAP19-2Q3LHN2 52 aa9.54□□□□□ -0.88
SEMA3B-211ENST00000612509 ATP11AUNQ6ZP68 121 aa9.54□□□□□ -0.88
SEMA3B-211ENST00000612509 Q6ZQT0 140 aa9.54□□□□□ -0.88
SEMA3B-211ENST00000612509 LOC110117498A0A087WWA1 95 aa9.53□□□□□ -0.88
SEMA3B-211ENST00000612509 C21orf62-AS1Q17RA5 79 aa9.53□□□□□ -0.88
SEMA3B-211ENST00000612509 A8MUU9 505 aa9.52□□□□□ -0.89
SEMA3B-211ENST00000612509 LCE2CQ5TA81 110 aa9.51□□□□□ -0.89
SEMA3B-211ENST00000612509 C14orf132Q9NPU4 83 aa9.51□□□□□ -0.89
SEMA3B-211ENST00000612509 H3BT86 120 aa9.49□□□□□ -0.89
SEMA3B-211ENST00000612509 PDE6GP18545 87 aa9.49□□□□□ -0.89
SEMA3B-211ENST00000612509 LINC00313P59037 77 aa9.49□□□□□ -0.89
SEMA3B-211ENST00000612509 KRTAP16-1A8MUX0 517 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms