RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 LRCOL1A6NCL2 159 aa4.04□□□□□ -1.76
SNX13-213ENST00000611725 SPRR4Q96PI1 79 aa4.03□□□□□ -1.76
SNX13-213ENST00000611725 KRTAP4-16G5E9R7 235 aaPredicted RBP4.03□□□□□ -1.76
SNX13-213ENST00000611725 IGHV6-1A0A0B4J1U7 121 aa4.02□□□□□ -1.77
SNX13-213ENST00000611725 OXTP01178 125 aa4.02□□□□□ -1.77
SNX13-213ENST00000611725 TNP2Q05952 138 aa4.02□□□□□ -1.77
SNX13-213ENST00000611725 RTL8CO15255 209 aa4.02□□□□□ -1.77
SNX13-213ENST00000611725 BRK1Q8WUW1 75 aa4.02□□□□□ -1.77
SNX13-213ENST00000611725 OCR1Q9BZK8 76 aa4.02□□□□□ -1.77
SNX13-213ENST00000611725 A0A087WTM6 91 aa4.02□□□□□ -1.77
SNX13-213ENST00000611725 DSCR10P59022 87 aa4.02□□□□□ -1.77
SNX13-213ENST00000611725 CSMD1Q96PZ7 3565 aa4.01□□□□□ -1.77
SNX13-213ENST00000611725 C4orf48Q5BLP8 95 aa4.01□□□□□ -1.77
SNX13-213ENST00000611725 CUBNO60494 3623 aa4.01□□□□□ -1.77
SNX13-213ENST00000611725 RPL37AP61513 92 aaKnown RBP4.01□□□□□ -1.77
SNX13-213ENST00000611725 H0Y9P7 68 aa4.01□□□□□ -1.77
SNX13-213ENST00000611725 MOBPQ13875 183 aa4.01□□□□□ -1.77
SNX13-213ENST00000611725 PRR15Q8IV56 129 aa4□□□□□ -1.77
SNX13-213ENST00000611725 A0A0U1RQV1 116 aa4□□□□□ -1.77
SNX13-213ENST00000611725 TGP01266 2768 aa4□□□□□ -1.77
SNX13-213ENST00000611725 hDV103S1A0JD37 113 aa4□□□□□ -1.77
SNX13-213ENST00000611725 A8MWP4 228 aa4□□□□□ -1.77
SNX13-213ENST00000611725 PRO0628Q9UI54 55 aa4□□□□□ -1.77
SNX13-213ENST00000611725 C1orf64Q8NEQ6 169 aa3.99□□□□□ -1.77
SNX13-213ENST00000611725 CIRBP-AS1Q8TBR5 109 aa3.99□□□□□ -1.77
SNX13-213ENST00000611725 TRAV22A0A0B4J277 110 aa3.98□□□□□ -1.77
SNX13-213ENST00000611725 SPENQ96T58 3664 aaKnown RBP3.98□□□□□ -1.77
SNX13-213ENST00000611725 SPRR1BP22528 89 aa3.98□□□□□ -1.77
SNX13-213ENST00000611725 KRTAP7-1Q8IUC3 87 aa3.98□□□□□ -1.77
SNX13-213ENST00000611725 C4orf26Q17RF5 130 aa3.98□□□□□ -1.77
SNX13-213ENST00000611725 PCOTHQ58A44 107 aa3.98□□□□□ -1.77
SNX13-213ENST00000611725 Q5XG85 94 aa3.98□□□□□ -1.77
SNX13-213ENST00000611725 H3BPC8 53 aa3.97□□□□□ -1.77
SNX13-213ENST00000611725 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.97□□□□□ -1.77
SNX13-213ENST00000611725 IGLV8-61A0A075B6I0 122 aa3.97□□□□□ -1.77
SNX13-213ENST00000611725 ZNF861PO60384 105 aa3.97□□□□□ -1.77
SNX13-213ENST00000611725 PSORS1C2Q9UIG4 136 aa3.97□□□□□ -1.77
SNX13-213ENST00000611725 V9GYY9 64 aa3.97□□□□□ -1.77
SNX13-213ENST00000611725 TP53AIP1Q9HCN2 124 aa3.97□□□□□ -1.77
SNX13-213ENST00000611725 LINC00336Q6ZUF6 198 aa3.96□□□□□ -1.78
SNX13-213ENST00000611725 CSMD2Q7Z408 3487 aa3.96□□□□□ -1.78
SNX13-213ENST00000611725 FP248Q71RG6 208 aaPredicted RBP3.95□□□□□ -1.78
SNX13-213ENST00000611725 ANAPC11Q9NYG5 84 aa3.95□□□□□ -1.78
SNX13-213ENST00000611725 CHKB-CPT1BH3BT56 60 aa3.95□□□□□ -1.78
SNX13-213ENST00000611725 PSPHP1O15172 72 aa3.94□□□□□ -1.78
SNX13-213ENST00000611725 SRRM2Q9UQ35 2752 aaKnown RBP3.93□□□□□ -1.78
SNX13-213ENST00000611725 PANO1I0J062 215 aa3.93□□□□□ -1.78
SNX13-213ENST00000611725 SPACA4Q8TDM5 124 aa3.93□□□□□ -1.78
SNX13-213ENST00000611725 WWC2-AS2Q96NR7 200 aa3.93□□□□□ -1.78
SNX13-213ENST00000611725 C8orf17Q9NRJ1 99 aa3.93□□□□□ -1.78
SNX13-213ENST00000611725 LCE6AA0A183 80 aa3.93□□□□□ -1.78
SNX13-213ENST00000611725 SSBP3-AS1Q7Z2R9 100 aa3.92□□□□□ -1.78
SNX13-213ENST00000611725 LINC00472Q9H8W2 130 aa3.92□□□□□ -1.78
SNX13-213ENST00000611725 ZCCHC13Q8WW36 166 aaKnown RBP3.92□□□□□ -1.78
SNX13-213ENST00000611725 DMBT1Q9UGM3 2413 aaPredicted RBP3.92□□□□□ -1.78
SNX13-213ENST00000611725 CYP4F30PQ9H0H9 118 aa3.92□□□□□ -1.78
SNX13-213ENST00000611725 MRPL34Q9BQ48 92 aaKnown RBP3.91□□□□□ -1.78
SNX13-213ENST00000611725 A0A1B0GVX0 72 aa3.91□□□□□ -1.78
SNX13-213ENST00000611725 ZFHX3Q15911 3703 aa3.91□□□□□ -1.78
SNX13-213ENST00000611725 IGLV7-43P04211 117 aa3.91□□□□□ -1.78
SNX13-213ENST00000611725 KRTAP11-1Q8IUC1 163 aa3.9□□□□□ -1.78
SNX13-213ENST00000611725 Q6ZRN7 208 aaPredicted RBP3.9□□□□□ -1.79
SNX13-213ENST00000611725 PLAC8Q9NZF1 115 aa3.9□□□□□ -1.79
SNX13-213ENST00000611725 PRR15LQ9BU68 103 aa3.9□□□□□ -1.79
SNX13-213ENST00000611725 A6NED7 52 aa3.9□□□□□ -1.79
SNX13-213ENST00000611725 SPTSSBQ8NFR3 76 aa3.9□□□□□ -1.79
SNX13-213ENST00000611725 FBN3Q75N90 2809 aa3.89□□□□□ -1.79
SNX13-213ENST00000611725 MMP24-AS1A0A0U1RRL7 71 aa3.89□□□□□ -1.79
SNX13-213ENST00000611725 LOC101927531A0A1B0GV80 90 aa3.88□□□□□ -1.79
SNX13-213ENST00000611725 Q6ZR54 194 aa3.88□□□□□ -1.79
SNX13-213ENST00000611725 LIMD2Q9BT23 127 aa3.88□□□□□ -1.79
SNX13-213ENST00000611725 FAM229AH3BQW9 127 aa3.87□□□□□ -1.79
SNX13-213ENST00000611725 BSNQ9UPA5 3926 aa3.87□□□□□ -1.79
SNX13-213ENST00000611725 A8MUN3 132 aa3.87□□□□□ -1.79
SNX13-213ENST00000611725 KRTAP29-1A8MX34 341 aaPredicted RBP3.87□□□□□ -1.79
SNX13-213ENST00000611725 SPANXA2-OT1Q8N9U9 137 aa3.87□□□□□ -1.79
SNX13-213ENST00000611725 C8orf87E5RJ46 101 aa3.86□□□□□ -1.79
SNX13-213ENST00000611725 RETNLBQ9BQ08 111 aa3.86□□□□□ -1.79
SNX13-213ENST00000611725 PLA2G1BP04054 148 aaKnown RBP3.85□□□□□ -1.79
SNX13-213ENST00000611725 IGKV2D-30A0A075B6S6 120 aa3.85□□□□□ -1.79
SNX13-213ENST00000611725 IGKV2-30P06310 120 aa3.85□□□□□ -1.79
SNX13-213ENST00000611725 COA5Q86WW8 74 aa3.84□□□□□ -1.79
SNX13-213ENST00000611725 LINC00313P59037 77 aa3.84□□□□□ -1.79
SNX13-213ENST00000611725 C1orf195Q5TG92 126 aa3.84□□□□□ -1.79
SNX13-213ENST00000611725 KRTAP13-1Q8IUC0 172 aa3.84□□□□□ -1.79
SNX13-213ENST00000611725 SPAG11AQ6PDA7 123 aa3.83□□□□□ -1.8
SNX13-213ENST00000611725 CD164Q04900 197 aa3.83□□□□□ -1.8
SNX13-213ENST00000611725 Q1T7F1 81 aa3.83□□□□□ -1.8
SNX13-213ENST00000611725 TYMSOSQ8TAI1 123 aa3.83□□□□□ -1.8
SNX13-213ENST00000611725 PMAIP1Q13794 54 aa3.82□□□□□ -1.8
SNX13-213ENST00000611725 LINC00483Q53H64 154 aa3.82□□□□□ -1.8
SNX13-213ENST00000611725 FLG2Q5D862 2391 aaPredicted RBP3.82□□□□□ -1.8
SNX13-213ENST00000611725 IGLV7-46A0A075B6I9 117 aa3.81□□□□□ -1.8
SNX13-213ENST00000611725 ACYP2P14621 99 aa3.81□□□□□ -1.8
SNX13-213ENST00000611725 FAM229BQ4G0N7 80 aa3.8□□□□□ -1.8
SNX13-213ENST00000611725 KRTAP10-2P60368 255 aa3.8□□□□□ -1.8
SNX13-213ENST00000611725 TRRAPQ9Y4A5 3859 aa3.79□□□□□ -1.8
SNX13-213ENST00000611725 SPINK1P00995 79 aa3.79□□□□□ -1.8
SNX13-213ENST00000611725 ANK3Q12955 4377 aaKnown RBP3.79□□□□□ -1.8
SNX13-213ENST00000611725 MEGF8Q7Z7M0 2845 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms