RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 TRAV30A0A087WSZ9 112 aa0.8□□□□□ -2.28
CCDC144B-206ENST00000609959 UBE2L5PA0A1B0GUS4 154 aa0.8□□□□□ -2.28
CCDC144B-206ENST00000609959 FAM24AA6NFZ4 105 aa0.8□□□□□ -2.28
CCDC144B-206ENST00000609959 H3BQ15 152 aa0.8□□□□□ -2.28
CCDC144B-206ENST00000609959 FXYD1O00168 92 aa0.8□□□□□ -2.28
CCDC144B-206ENST00000609959 UBE2L3P68036 154 aaKnown RBP0.8□□□□□ -2.28
CCDC144B-206ENST00000609959 HAMPP81172 84 aa0.8□□□□□ -2.28
CCDC144B-206ENST00000609959 C10orf128Q5T292 105 aa0.8□□□□□ -2.28
CCDC144B-206ENST00000609959 MINOS1Q5TGZ0 78 aa0.8□□□□□ -2.28
CCDC144B-206ENST00000609959 FAM74A4Q5TZK3 123 aa0.8□□□□□ -2.28
CCDC144B-206ENST00000609959 SVBPQ8N300 66 aa0.8□□□□□ -2.28
CCDC144B-206ENST00000609959 ACBD7Q8N6N7 88 aa0.8□□□□□ -2.28
CCDC144B-206ENST00000609959 DEFB104AQ8WTQ1 72 aa0.8□□□□□ -2.28
CCDC144B-206ENST00000609959 WFDC6Q9BQY6 131 aa0.8□□□□□ -2.28
CCDC144B-206ENST00000609959 LINC00312Q9Y6C7 94 aa0.8□□□□□ -2.28
CCDC144B-206ENST00000609959 USH2AO75445 5202 aa0.79□□□□□ -2.28
CCDC144B-206ENST00000609959 TMEM218A2RU14 115 aa0.79□□□□□ -2.28
CCDC144B-206ENST00000609959 TMEM262E9PQX1 116 aa0.79□□□□□ -2.28
CCDC144B-206ENST00000609959 SPINK8P0C7L1 97 aa0.79□□□□□ -2.28
CCDC144B-206ENST00000609959 RPL37P61927 97 aaKnown RBP0.79□□□□□ -2.28
CCDC144B-206ENST00000609959 DEFB135Q30KP9 77 aa0.79□□□□□ -2.28
CCDC144B-206ENST00000609959 TTC9CQ8N5M4 171 aa0.79□□□□□ -2.28
CCDC144B-206ENST00000609959 HILPDAQ9Y5L2 63 aa0.79□□□□□ -2.28
CCDC144B-206ENST00000609959 MUC17Q685J3 4493 aa0.78□□□□□ -2.28
CCDC144B-206ENST00000609959 G3V318 75 aa0.78□□□□□ -2.28
CCDC144B-206ENST00000609959 HMGN4O00479 90 aa0.78□□□□□ -2.28
CCDC144B-206ENST00000609959 S100A8P05109 93 aa0.78□□□□□ -2.28
CCDC144B-206ENST00000609959 EDDM3BP56851 147 aa0.78□□□□□ -2.28
CCDC144B-206ENST00000609959 Q96NJ1 140 aa0.78□□□□□ -2.28
CCDC144B-206ENST00000609959 V9GYV3 84 aa0.78□□□□□ -2.28
CCDC144B-206ENST00000609959 A0A1B0GWA3 101 aa0.77□□□□□ -2.29
CCDC144B-206ENST00000609959 DEFB4AO15263 64 aa0.77□□□□□ -2.29
CCDC144B-206ENST00000609959 DEFB114Q30KQ6 69 aa0.77□□□□□ -2.29
CCDC144B-206ENST00000609959 DEFB131BA0A096LNP1 70 aa0.76□□□□□ -2.29
CCDC144B-206ENST00000609959 FXYD6P3P58550 94 aa0.76□□□□□ -2.29
CCDC144B-206ENST00000609959 RPL38P63173 70 aaKnown RBP0.76□□□□□ -2.29
CCDC144B-206ENST00000609959 Q5VV11 94 aa0.76□□□□□ -2.29
CCDC144B-206ENST00000609959 HEPN1Q6WQI6 88 aa0.76□□□□□ -2.29
CCDC144B-206ENST00000609959 LINC00474Q9P2X8 69 aa0.76□□□□□ -2.29
CCDC144B-206ENST00000609959 LENEPQ9Y5L5 61 aa0.76□□□□□ -2.29
CCDC144B-206ENST00000609959 MACF1Q9UPN3 7388 aaKnown RBP0.75□□□□□ -2.29
CCDC144B-206ENST00000609959 TRBV7-3A0A075B6L6 115 aa0.75□□□□□ -2.29
CCDC144B-206ENST00000609959 M0R135 149 aa0.75□□□□□ -2.29
CCDC144B-206ENST00000609959 NDUFA3O95167 84 aa0.75□□□□□ -2.29
CCDC144B-206ENST00000609959 DEFA5Q01523 94 aa0.75□□□□□ -2.29
CCDC144B-206ENST00000609959 UBE2DNLQ8IWF7 75 aa0.75□□□□□ -2.29
CCDC144B-206ENST00000609959 DPY30Q9C005 99 aa0.75□□□□□ -2.29
CCDC144B-206ENST00000609959 SYNE2Q8WXH0 6885 aaKnown RBP0.74□□□□□ -2.29
CCDC144B-206ENST00000609959 NEBP20929 6669 aa0.74□□□□□ -2.29
CCDC144B-206ENST00000609959 MUC12Q9UKN1 5478 aa0.74□□□□□ -2.29
CCDC144B-206ENST00000609959 H3BUA1 57 aa0.74□□□□□ -2.29
CCDC144B-206ENST00000609959 M0R143 59 aa0.74□□□□□ -2.29
CCDC144B-206ENST00000609959 LINC00032P0C843 101 aa0.74□□□□□ -2.29
CCDC144B-206ENST00000609959 RPS27P42677 84 aaKnown RBP0.74□□□□□ -2.29
CCDC144B-206ENST00000609959 ZNF137PP52743 207 aa0.74□□□□□ -2.29
CCDC144B-206ENST00000609959 CCL18P55774 89 aa0.74□□□□□ -2.29
CCDC144B-206ENST00000609959 KRTAP20-1Q3LI63 56 aa0.74□□□□□ -2.29
CCDC144B-206ENST00000609959 SPINK9Q5DT21 86 aa0.74□□□□□ -2.29
CCDC144B-206ENST00000609959 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.74□□□□□ -2.29
CCDC144B-206ENST00000609959 LEAP2Q969E1 77 aa0.74□□□□□ -2.29
CCDC144B-206ENST00000609959 MGST2Q99735 147 aa0.74□□□□□ -2.29
CCDC144B-206ENST00000609959 FAM103A1Q9BTL3 118 aaKnown RBP0.74□□□□□ -2.29
CCDC144B-206ENST00000609959 SCP2D1Q9UJQ7 156 aa0.74□□□□□ -2.29
CCDC144B-206ENST00000609959 GVQW2A0A096LPI5 108 aaPredicted RBP0.73□□□□□ -2.29
CCDC144B-206ENST00000609959 CPSF4LA6NMK7 179 aaKnown RBP0.73□□□□□ -2.29
CCDC144B-206ENST00000609959 H3BQF6 201 aa0.73□□□□□ -2.29
CCDC144B-206ENST00000609959 KRTAP19-2Q3LHN2 52 aa0.73□□□□□ -2.29
CCDC144B-206ENST00000609959 FAM167A-AS1Q96KT0 104 aa0.73□□□□□ -2.29
CCDC144B-206ENST00000609959 LINC01600Q96MT4 127 aa0.73□□□□□ -2.29
CCDC144B-206ENST00000609959 NDUFA4L2Q9NRX3 87 aa0.73□□□□□ -2.29
CCDC144B-206ENST00000609959 TRGV1A0A0A0MS02 117 aa0.72□□□□□ -2.29
CCDC144B-206ENST00000609959 MPC2O95563 127 aa0.72□□□□□ -2.29
CCDC144B-206ENST00000609959 PPP1R17O96001 155 aa0.72□□□□□ -2.29
CCDC144B-206ENST00000609959 PKIAP61925 76 aa0.72□□□□□ -2.29
CCDC144B-206ENST00000609959 MT1HP80294 61 aa0.72□□□□□ -2.29
CCDC144B-206ENST00000609959 WFDC2Q14508 124 aa0.72□□□□□ -2.29
CCDC144B-206ENST00000609959 KLK9Q2XQG4 91 aa0.72□□□□□ -2.29
CCDC144B-206ENST00000609959 BAGE3Q86Y29 109 aa0.72□□□□□ -2.29
CCDC144B-206ENST00000609959 SMIM11BQ8TCY0 68 aa0.72□□□□□ -2.29
CCDC144B-206ENST00000609959 USMG5Q96IX5 58 aa0.72□□□□□ -2.29
CCDC144B-206ENST00000609959 AMELXQ99217 191 aa0.72□□□□□ -2.29
CCDC144B-206ENST00000609959 CDC42SE2Q9NRR3 84 aa0.72□□□□□ -2.29
CCDC144B-206ENST00000609959 R4GMQ9 66 aa0.72□□□□□ -2.29
CCDC144B-206ENST00000609959 FLGP20930 4061 aaPredicted RBP0.72□□□□□ -2.29
CCDC144B-206ENST00000609959 KMT2DO14686 5537 aa0.71□□□□□ -2.3
CCDC144B-206ENST00000609959 NAP1L6A6NFF2 107 aa0.71□□□□□ -2.3
CCDC144B-206ENST00000609959 TMEM14DPA8MWL7 114 aa0.71□□□□□ -2.3
CCDC144B-206ENST00000609959 PRH1P02810 166 aa0.71□□□□□ -2.3
CCDC144B-206ENST00000609959 SPART-AS1P0CW21 52 aa0.71□□□□□ -2.3
CCDC144B-206ENST00000609959 S100A3P33764 101 aa0.71□□□□□ -2.3
CCDC144B-206ENST00000609959 S100A10P60903 97 aa0.71□□□□□ -2.3
CCDC144B-206ENST00000609959 UBE2D3P61077 147 aa0.71□□□□□ -2.3
CCDC144B-206ENST00000609959 UBE2D2P62837 147 aa0.71□□□□□ -2.3
CCDC144B-206ENST00000609959 LINC01590Q5TEZ4 76 aa0.71□□□□□ -2.3
CCDC144B-206ENST00000609959 V9GYS6 101 aa0.71□□□□□ -2.3
CCDC144B-206ENST00000609959 A0A096LPF7 62 aa0.7□□□□□ -2.3
CCDC144B-206ENST00000609959 A0A0D9SG42 100 aa0.7□□□□□ -2.3
CCDC144B-206ENST00000609959 FAM223BA6NKX1 122 aa0.7□□□□□ -2.3
CCDC144B-206ENST00000609959 F2Z2F3 143 aa0.7□□□□□ -2.3
CCDC144B-206ENST00000609959 SAA2P0DJI9 122 aaPredicted RBP0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms