RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 SPATA45Q537H7 98 aa10.58□□□□□ -0.72
CTSA-217ENST00000607482 VAMP8Q9BV40 100 aa10.58□□□□□ -0.72
CTSA-217ENST00000607482 SNHG12Q9BXW3 62 aa10.57□□□□□ -0.72
CTSA-217ENST00000607482 Q5XG85 94 aa10.56□□□□□ -0.72
CTSA-217ENST00000607482 FAT4Q6V0I7 4981 aa10.56□□□□□ -0.72
CTSA-217ENST00000607482 Q6JHZ5 121 aa10.55□□□□□ -0.72
CTSA-217ENST00000607482 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.55□□□□□ -0.72
CTSA-217ENST00000607482 C1orf195Q5TG92 126 aa10.53□□□□□ -0.72
CTSA-217ENST00000607482 HIGD1BQ9P298 99 aa10.52□□□□□ -0.73
CTSA-217ENST00000607482 OCIAD2Q56VL3 154 aa10.51□□□□□ -0.73
CTSA-217ENST00000607482 PPDPFLQ8WWR9 84 aa10.51□□□□□ -0.73
CTSA-217ENST00000607482 CLEC2BQ92478 149 aa10.51□□□□□ -0.73
CTSA-217ENST00000607482 CFC1BP0CG36 223 aa10.5□□□□□ -0.73
CTSA-217ENST00000607482 CFC1P0CG37 223 aa10.5□□□□□ -0.73
CTSA-217ENST00000607482 TMEM238LA0A1B0GVL6 79 aa10.48□□□□□ -0.73
CTSA-217ENST00000607482 A6NJY4 79 aa10.48□□□□□ -0.73
CTSA-217ENST00000607482 H0YGX0 51 aa10.48□□□□□ -0.73
CTSA-217ENST00000607482 PCOTHQ58A44 107 aa10.48□□□□□ -0.73
CTSA-217ENST00000607482 LCE2AQ5TA79 106 aaPredicted RBP10.48□□□□□ -0.73
CTSA-217ENST00000607482 A0A0B4J2C4 111 aa10.47□□□□□ -0.73
CTSA-217ENST00000607482 IGLV8-61A0A075B6I0 122 aa10.46□□□□□ -0.73
CTSA-217ENST00000607482 IGFL1Q6UW32 110 aa10.46□□□□□ -0.73
CTSA-217ENST00000607482 CEND1Q8N111 149 aa10.45□□□□□ -0.74
CTSA-217ENST00000607482 KRTAP4-1Q9BYQ7 146 aa10.45□□□□□ -0.74
CTSA-217ENST00000607482 TRBV7-7A0A0K0K1E9 115 aa10.44□□□□□ -0.74
CTSA-217ENST00000607482 GHRHP01286 108 aa10.44□□□□□ -0.74
CTSA-217ENST00000607482 H3BUT2 72 aa10.43□□□□□ -0.74
CTSA-217ENST00000607482 PRO1854Q9UHT4 67 aa10.43□□□□□ -0.74
CTSA-217ENST00000607482 C2orf91Q6ZV80 131 aa10.42□□□□□ -0.74
CTSA-217ENST00000607482 FABP2P12104 132 aa10.38□□□□□ -0.75
CTSA-217ENST00000607482 LST1O00453 97 aa10.37□□□□□ -0.75
CTSA-217ENST00000607482 NDUFV3P56181 108 aaKnown RBP10.37□□□□□ -0.75
CTSA-217ENST00000607482 FAM218AQ96MZ4 157 aa10.36□□□□□ -0.75
CTSA-217ENST00000607482 SS18L2Q9UHA2 77 aa10.36□□□□□ -0.75
CTSA-217ENST00000607482 PSMB2P49721 201 aa10.35□□□□□ -0.75
CTSA-217ENST00000607482 A0A1B0GX51 115 aa10.34□□□□□ -0.75
CTSA-217ENST00000607482 FXYD2P54710 66 aa10.34□□□□□ -0.75
CTSA-217ENST00000607482 RPL37P61927 97 aaKnown RBP10.34□□□□□ -0.75
CTSA-217ENST00000607482 H3BMG7 143 aa10.33□□□□□ -0.76
CTSA-217ENST00000607482 DNAL4O96015 105 aa10.33□□□□□ -0.76
CTSA-217ENST00000607482 TMA7Q9Y2S6 64 aaKnown RBP10.33□□□□□ -0.76
CTSA-217ENST00000607482 HSD52Q0P140 79 aa10.32□□□□□ -0.76
CTSA-217ENST00000607482 KRTAP9-2Q9BYQ4 174 aa10.32□□□□□ -0.76
CTSA-217ENST00000607482 COX6CP09669 75 aa10.31□□□□□ -0.76
CTSA-217ENST00000607482 TEN1Q86WV5 123 aa10.31□□□□□ -0.76
CTSA-217ENST00000607482 TRIAP1O43715 76 aa10.3□□□□□ -0.76
CTSA-217ENST00000607482 PYY3Q5JQD4 70 aa10.3□□□□□ -0.76
CTSA-217ENST00000607482 OBSCN-AS1Q96MR7 158 aa10.3□□□□□ -0.76
CTSA-217ENST00000607482 Q6Q795 121 aa10.27□□□□□ -0.77
CTSA-217ENST00000607482 ATP11AUNQ6ZP68 121 aa10.27□□□□□ -0.77
CTSA-217ENST00000607482 ORMDL1Q9P0S3 153 aa10.26□□□□□ -0.77
CTSA-217ENST00000607482 A0A087WSZ3 146 aa10.25□□□□□ -0.77
CTSA-217ENST00000607482 H3BQ85 93 aa10.25□□□□□ -0.77
CTSA-217ENST00000607482 K7ERJ3 54 aa10.25□□□□□ -0.77
CTSA-217ENST00000607482 UQCR10Q9UDW1 63 aa10.25□□□□□ -0.77
CTSA-217ENST00000607482 COX6B2Q6YFQ2 88 aa10.24□□□□□ -0.77
CTSA-217ENST00000607482 A0A1B0GV72 72 aa10.23□□□□□ -0.77
CTSA-217ENST00000607482 Q96NJ1 140 aa10.23□□□□□ -0.77
CTSA-217ENST00000607482 ANKRD29Q8N6D5 301 aa10.22□□□□□ -0.77
CTSA-217ENST00000607482 TMEM256-PLSCR3K7ERE1 68 aa10.2□□□□□ -0.78
CTSA-217ENST00000607482 SCGB1C2P0DMR2 95 aa10.2□□□□□ -0.78
CTSA-217ENST00000607482 Q75L30 129 aa10.18□□□□□ -0.78
CTSA-217ENST00000607482 LCE2CQ5TA81 110 aa10.17□□□□□ -0.78
CTSA-217ENST00000607482 SIGMAR1Q99720 223 aa10.17□□□□□ -0.78
CTSA-217ENST00000607482 M0R2T5 61 aa10.15□□□□□ -0.78
CTSA-217ENST00000607482 A0A1W2PNM2 257 aa10.13□□□□□ -0.79
CTSA-217ENST00000607482 TRBV7-4A0A0J9YYF1 115 aa10.12□□□□□ -0.79
CTSA-217ENST00000607482 MT1HP80294 61 aa10.12□□□□□ -0.79
CTSA-217ENST00000607482 KRTAP19-2Q3LHN2 52 aa10.12□□□□□ -0.79
CTSA-217ENST00000607482 TRACP01848 142 aa10.11□□□□□ -0.79
CTSA-217ENST00000607482 CCKP06307 115 aa10.1□□□□□ -0.79
CTSA-217ENST00000607482 IGKV4-1P06312 121 aa10.1□□□□□ -0.79
CTSA-217ENST00000607482 UBE2V1Q13404 147 aa10.09□□□□□ -0.79
CTSA-217ENST00000607482 VPS25Q9BRG1 176 aa10.09□□□□□ -0.79
CTSA-217ENST00000607482 DSCR10P59022 87 aa10.08□□□□□ -0.8
CTSA-217ENST00000607482 LINC00313P59037 77 aa10.06□□□□□ -0.8
CTSA-217ENST00000607482 DSCR8Q96T75 97 aa10.06□□□□□ -0.8
CTSA-217ENST00000607482 RBM3P98179 157 aaKnown RBP10.05□□□□□ -0.8
CTSA-217ENST00000607482 C20orf166-AS1Q96NR2 134 aa10.04□□□□□ -0.8
CTSA-217ENST00000607482 M0R143 59 aa10.03□□□□□ -0.8
CTSA-217ENST00000607482 TRBV20-1A0A075B6N2 111 aa10.02□□□□□ -0.81
CTSA-217ENST00000607482 A8MUU9 505 aa10.02□□□□□ -0.81
CTSA-217ENST00000607482 DEFB116Q30KQ4 102 aa10.02□□□□□ -0.81
CTSA-217ENST00000607482 BAALC-AS2P0C853 105 aa10.01□□□□□ -0.81
CTSA-217ENST00000607482 KRTAP9-6A0A140TA67 174 aa9.99□□□□□ -0.81
CTSA-217ENST00000607482 IGHV6-1A0A0B4J1U7 121 aa9.98□□□□□ -0.81
CTSA-217ENST00000607482 C9JAW5 83 aa9.98□□□□□ -0.81
CTSA-217ENST00000607482 LCE2DQ5TA82 110 aaPredicted RBP9.98□□□□□ -0.81
CTSA-217ENST00000607482 ATXN8Q156A1 80 aa9.97□□□□□ -0.81
CTSA-217ENST00000607482 LINC00472Q9H8W2 130 aa9.96□□□□□ -0.82
CTSA-217ENST00000607482 C21orf62-AS1Q17RA5 79 aa9.95□□□□□ -0.82
CTSA-217ENST00000607482 KRTAP10-6P60371 365 aaPredicted RBP9.93□□□□□ -0.82
CTSA-217ENST00000607482 NAA38Q9BRA0 125 aaKnown RBP9.92□□□□□ -0.82
CTSA-217ENST00000607482 SMIM6P0DI80 62 aa9.9□□□□□ -0.82
CTSA-217ENST00000607482 JMJD7-PLA2G4BH0Y9G9 81 aa9.89□□□□□ -0.83
CTSA-217ENST00000607482 J3KT08 172 aa9.89□□□□□ -0.83
CTSA-217ENST00000607482 LORP23490 312 aaPredicted RBP9.89□□□□□ -0.83
CTSA-217ENST00000607482 LYRM7Q5U5X0 104 aa9.89□□□□□ -0.83
CTSA-217ENST00000607482 NOTCH2NLQ7Z3S9 236 aa9.88□□□□□ -0.83
CTSA-217ENST00000607482 FAM236DA0A1B0GTK5 79 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms