RNA–Protein interactions for RNA: ENST00000606213.5

PTPRN-219, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-219ENST00000606213 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13□□□□□ -0.33
PTPRN-219ENST00000606213 ASB16-AS1Q495Z4 193 aa12.99□□□□□ -0.33
PTPRN-219ENST00000606213 C2orf91Q6ZV80 131 aa12.99□□□□□ -0.33
PTPRN-219ENST00000606213 TMEM238LA0A1B0GVL6 79 aa12.98□□□□□ -0.33
PTPRN-219ENST00000606213 A6NJY4 79 aa12.98□□□□□ -0.33
PTPRN-219ENST00000606213 A0A0B4J2C4 111 aa12.97□□□□□ -0.33
PTPRN-219ENST00000606213 Q5XG85 94 aa12.96□□□□□ -0.33
PTPRN-219ENST00000606213 CEND1Q8N111 149 aa12.96□□□□□ -0.33
PTPRN-219ENST00000606213 SNHG12Q9BXW3 62 aa12.96□□□□□ -0.33
PTPRN-219ENST00000606213 MUC17Q685J3 4493 aa12.95□□□□□ -0.34
PTPRN-219ENST00000606213 TCL1BO95988 128 aa12.95□□□□□ -0.34
PTPRN-219ENST00000606213 Q6JHZ5 121 aa12.95□□□□□ -0.34
PTPRN-219ENST00000606213 H0YGX0 51 aa12.94□□□□□ -0.34
PTPRN-219ENST00000606213 XP32Q5T750 250 aa12.94□□□□□ -0.34
PTPRN-219ENST00000606213 PPDPFLQ8WWR9 84 aa12.94□□□□□ -0.34
PTPRN-219ENST00000606213 C9orf92A6NGG3 77 aa12.93□□□□□ -0.34
PTPRN-219ENST00000606213 TMA7Q9Y2S6 64 aaKnown RBP12.93□□□□□ -0.34
PTPRN-219ENST00000606213 OCIAD2Q56VL3 154 aa12.92□□□□□ -0.34
PTPRN-219ENST00000606213 CLEC2BQ92478 149 aa12.91□□□□□ -0.34
PTPRN-219ENST00000606213 PRO1854Q9UHT4 67 aa12.91□□□□□ -0.34
PTPRN-219ENST00000606213 PYY3Q5JQD4 70 aa12.9□□□□□ -0.34
PTPRN-219ENST00000606213 C1orf195Q5TG92 126 aa12.9□□□□□ -0.34
PTPRN-219ENST00000606213 IGLV8-61A0A075B6I0 122 aa12.88□□□□□ -0.35
PTPRN-219ENST00000606213 FAT4Q6V0I7 4981 aa12.87□□□□□ -0.35
PTPRN-219ENST00000606213 IGFL1Q6UW32 110 aa12.87□□□□□ -0.35
PTPRN-219ENST00000606213 FXYD2P54710 66 aa12.85□□□□□ -0.35
PTPRN-219ENST00000606213 GHRHP01286 108 aa12.83□□□□□ -0.36
PTPRN-219ENST00000606213 HSD52Q0P140 79 aa12.83□□□□□ -0.36
PTPRN-219ENST00000606213 TRBV7-7A0A0K0K1E9 115 aa12.82□□□□□ -0.36
PTPRN-219ENST00000606213 FAM218AQ96MZ4 157 aa12.82□□□□□ -0.36
PTPRN-219ENST00000606213 H3BUT2 72 aa12.81□□□□□ -0.36
PTPRN-219ENST00000606213 A0A1B0GX51 115 aa12.79□□□□□ -0.36
PTPRN-219ENST00000606213 PSMB2P49721 201 aa12.77□□□□□ -0.37
PTPRN-219ENST00000606213 NDUFV3P56181 108 aaKnown RBP12.77□□□□□ -0.37
PTPRN-219ENST00000606213 UQCR10Q9UDW1 63 aa12.77□□□□□ -0.37
PTPRN-219ENST00000606213 TRIAP1O43715 76 aa12.76□□□□□ -0.37
PTPRN-219ENST00000606213 FABP2P12104 132 aa12.76□□□□□ -0.37
PTPRN-219ENST00000606213 PCOTHQ58A44 107 aa12.74□□□□□ -0.37
PTPRN-219ENST00000606213 LCE2AQ5TA79 106 aaPredicted RBP12.74□□□□□ -0.37
PTPRN-219ENST00000606213 KRTAP4-1Q9BYQ7 146 aa12.74□□□□□ -0.37
PTPRN-219ENST00000606213 DNAL4O96015 105 aa12.73□□□□□ -0.37
PTPRN-219ENST00000606213 COX6CP09669 75 aa12.73□□□□□ -0.37
PTPRN-219ENST00000606213 K7ERJ3 54 aa12.72□□□□□ -0.37
PTPRN-219ENST00000606213 H3BMG7 143 aa12.71□□□□□ -0.37
PTPRN-219ENST00000606213 LST1O00453 97 aa12.7□□□□□ -0.38
PTPRN-219ENST00000606213 SS18L2Q9UHA2 77 aa12.7□□□□□ -0.38
PTPRN-219ENST00000606213 TEN1Q86WV5 123 aa12.68□□□□□ -0.38
PTPRN-219ENST00000606213 Q6Q795 121 aa12.66□□□□□ -0.38
PTPRN-219ENST00000606213 ORMDL1Q9P0S3 153 aa12.66□□□□□ -0.38
PTPRN-219ENST00000606213 H3BQ85 93 aa12.64□□□□□ -0.39
PTPRN-219ENST00000606213 KRTAP9-2Q9BYQ4 174 aa12.63□□□□□ -0.39
PTPRN-219ENST00000606213 RPL37P61927 97 aaKnown RBP12.62□□□□□ -0.39
PTPRN-219ENST00000606213 A0A087WSZ3 146 aa12.6□□□□□ -0.39
PTPRN-219ENST00000606213 SCGB1C2P0DMR2 95 aa12.6□□□□□ -0.39
PTPRN-219ENST00000606213 TMEM256-PLSCR3K7ERE1 68 aa12.58□□□□□ -0.4
PTPRN-219ENST00000606213 OBSCN-AS1Q96MR7 158 aa12.58□□□□□ -0.4
PTPRN-219ENST00000606213 A0A1B0GV72 72 aa12.57□□□□□ -0.4
PTPRN-219ENST00000606213 ANKRD29Q8N6D5 301 aa12.57□□□□□ -0.4
PTPRN-219ENST00000606213 A0A1W2PNM2 257 aa12.5□□□□□ -0.41
PTPRN-219ENST00000606213 TRACP01848 142 aa12.5□□□□□ -0.41
PTPRN-219ENST00000606213 ATP11AUNQ6ZP68 121 aa12.49□□□□□ -0.41
PTPRN-219ENST00000606213 Q96NJ1 140 aa12.49□□□□□ -0.41
PTPRN-219ENST00000606213 M0R143 59 aa12.48□□□□□ -0.41
PTPRN-219ENST00000606213 TRBV7-4A0A0J9YYF1 115 aa12.47□□□□□ -0.41
PTPRN-219ENST00000606213 UBE2V1Q13404 147 aa12.47□□□□□ -0.41
PTPRN-219ENST00000606213 SIGMAR1Q99720 223 aa12.46□□□□□ -0.41
PTPRN-219ENST00000606213 CCKP06307 115 aa12.44□□□□□ -0.42
PTPRN-219ENST00000606213 Q75L30 129 aa12.44□□□□□ -0.42
PTPRN-219ENST00000606213 SMIM6P0DI80 62 aa12.43□□□□□ -0.42
PTPRN-219ENST00000606213 VPS25Q9BRG1 176 aa12.4□□□□□ -0.42
PTPRN-219ENST00000606213 RBM3P98179 157 aaKnown RBP12.39□□□□□ -0.43
PTPRN-219ENST00000606213 DSCR8Q96T75 97 aa12.39□□□□□ -0.43
PTPRN-219ENST00000606213 IGKV4-1P06312 121 aa12.38□□□□□ -0.43
PTPRN-219ENST00000606213 LCE2CQ5TA81 110 aa12.38□□□□□ -0.43
PTPRN-219ENST00000606213 COX6B2Q6YFQ2 88 aa12.38□□□□□ -0.43
PTPRN-219ENST00000606213 BAALC-AS2P0C853 105 aa12.37□□□□□ -0.43
PTPRN-219ENST00000606213 DSCR10P59022 87 aa12.35□□□□□ -0.43
PTPRN-219ENST00000606213 KRTAP19-2Q3LHN2 52 aa12.35□□□□□ -0.43
PTPRN-219ENST00000606213 ATXN8Q156A1 80 aa12.34□□□□□ -0.43
PTPRN-219ENST00000606213 TSTD3H0UI37 97 aa12.33□□□□□ -0.44
PTPRN-219ENST00000606213 NAA38Q9BRA0 125 aaKnown RBP12.33□□□□□ -0.44
PTPRN-219ENST00000606213 LINC00313P59037 77 aa12.31□□□□□ -0.44
PTPRN-219ENST00000606213 DEFB116Q30KQ4 102 aa12.31□□□□□ -0.44
PTPRN-219ENST00000606213 C20orf166-AS1Q96NR2 134 aa12.31□□□□□ -0.44
PTPRN-219ENST00000606213 C9JAW5 83 aa12.3□□□□□ -0.44
PTPRN-219ENST00000606213 A8MUU9 505 aa12.29□□□□□ -0.44
PTPRN-219ENST00000606213 MT1HP80294 61 aa12.28□□□□□ -0.44
PTPRN-219ENST00000606213 BATFQ16520 125 aa12.27□□□□□ -0.45
PTPRN-219ENST00000606213 LYRM7Q5U5X0 104 aa12.27□□□□□ -0.45
PTPRN-219ENST00000606213 LINC00472Q9H8W2 130 aa12.27□□□□□ -0.45
PTPRN-219ENST00000606213 C21orf62-AS1Q17RA5 79 aa12.26□□□□□ -0.45
PTPRN-219ENST00000606213 KRTAP9-6A0A140TA67 174 aa12.24□□□□□ -0.45
PTPRN-219ENST00000606213 IGHV6-1A0A0B4J1U7 121 aa12.23□□□□□ -0.45
PTPRN-219ENST00000606213 JMJD7-PLA2G4BH0Y9G9 81 aa12.23□□□□□ -0.45
PTPRN-219ENST00000606213 M0R2T5 61 aa12.23□□□□□ -0.45
PTPRN-219ENST00000606213 TRBV20-1A0A075B6N2 111 aa12.17□□□□□ -0.46
PTPRN-219ENST00000606213 J3KT08 172 aa12.15□□□□□ -0.46
PTPRN-219ENST00000606213 PDE6GP18545 87 aa12.14□□□□□ -0.47
PTPRN-219ENST00000606213 Q6ZQT0 140 aa12.14□□□□□ -0.47
PTPRN-219ENST00000606213 NOTCH2NLQ7Z3S9 236 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms