RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 A0A087WSZ3 146 aa9.61□□□□□ -0.87
LYSMD4-211ENST00000604213 MP68P56378 58 aa9.61□□□□□ -0.87
LYSMD4-211ENST00000604213 V9GYY9 64 aa9.61□□□□□ -0.87
LYSMD4-211ENST00000604213 KRTAP29-1A8MX34 341 aaPredicted RBP9.6□□□□□ -0.87
LYSMD4-211ENST00000604213 RPL37AP61513 92 aaKnown RBP9.59□□□□□ -0.87
LYSMD4-211ENST00000604213 F8P00451 2351 aa9.58□□□□□ -0.88
LYSMD4-211ENST00000604213 PRLHP81277 87 aa9.58□□□□□ -0.88
LYSMD4-211ENST00000604213 LINC00208Q96KT6 92 aa9.58□□□□□ -0.88
LYSMD4-211ENST00000604213 PRB2P02812 416 aaPredicted RBP9.57□□□□□ -0.88
LYSMD4-211ENST00000604213 B9D2Q9BPU9 175 aa9.57□□□□□ -0.88
LYSMD4-211ENST00000604213 A8MUN3 132 aa9.55□□□□□ -0.88
LYSMD4-211ENST00000604213 CMYA5Q8N3K9 4069 aa9.54□□□□□ -0.88
LYSMD4-211ENST00000604213 H0Y9P7 68 aa9.53□□□□□ -0.88
LYSMD4-211ENST00000604213 SPANXA2-OT1Q8N9U9 137 aa9.53□□□□□ -0.88
LYSMD4-211ENST00000604213 CNBPP62633 177 aaKnown RBP9.53□□□□□ -0.88
LYSMD4-211ENST00000604213 CASC2Q6XLA1 102 aa9.53□□□□□ -0.88
LYSMD4-211ENST00000604213 A0A096LNI7 61 aa9.52□□□□□ -0.88
LYSMD4-211ENST00000604213 H3BPC8 53 aa9.52□□□□□ -0.89
LYSMD4-211ENST00000604213 UBE2AP49459 152 aa9.52□□□□□ -0.89
LYSMD4-211ENST00000604213 Q5VV11 94 aa9.5□□□□□ -0.89
LYSMD4-211ENST00000604213 DNAH3Q8TD57 4116 aa9.5□□□□□ -0.89
LYSMD4-211ENST00000604213 IGKV2-24A0A0C4DH68 120 aa9.5□□□□□ -0.89
LYSMD4-211ENST00000604213 C16orf90A8MZG2 172 aa9.49□□□□□ -0.89
LYSMD4-211ENST00000604213 A8MWP4 228 aa9.49□□□□□ -0.89
LYSMD4-211ENST00000604213 SEC61GP60059 68 aa9.49□□□□□ -0.89
LYSMD4-211ENST00000604213 PMAIP1Q13794 54 aa9.49□□□□□ -0.89
LYSMD4-211ENST00000604213 LINC00472Q9H8W2 130 aa9.48□□□□□ -0.89
LYSMD4-211ENST00000604213 Q8N9P0 234 aaPredicted RBP9.46□□□□□ -0.89
LYSMD4-211ENST00000604213 C9orf163Q8N9P6 203 aa9.46□□□□□ -0.89
LYSMD4-211ENST00000604213 SPRR1BP22528 89 aa9.46□□□□□ -0.9
LYSMD4-211ENST00000604213 KRTAP11-1Q8IUC1 163 aa9.46□□□□□ -0.9
LYSMD4-211ENST00000604213 A8MU10 97 aa9.45□□□□□ -0.9
LYSMD4-211ENST00000604213 DNAH10Q8IVF4 4471 aa9.45□□□□□ -0.9
LYSMD4-211ENST00000604213 LIMD2Q9BT23 127 aa9.43□□□□□ -0.9
LYSMD4-211ENST00000604213 SRRM2Q9UQ35 2752 aaKnown RBP9.42□□□□□ -0.9
LYSMD4-211ENST00000604213 PHF5AQ7RTV0 110 aaKnown RBP9.42□□□□□ -0.9
LYSMD4-211ENST00000604213 H0Y9J4 135 aa9.41□□□□□ -0.9
LYSMD4-211ENST00000604213 MMP24-AS1A0A0U1RRL7 71 aa9.41□□□□□ -0.9
LYSMD4-211ENST00000604213 KRTAP1-5Q9BYS1 174 aa9.4□□□□□ -0.9
LYSMD4-211ENST00000604213 CHKB-CPT1BH3BT56 60 aa9.39□□□□□ -0.91
LYSMD4-211ENST00000604213 PRR15LQ9BU68 103 aa9.38□□□□□ -0.91
LYSMD4-211ENST00000604213 CHTF8P0CG12 524 aa9.38□□□□□ -0.91
LYSMD4-211ENST00000604213 HUWE1Q7Z6Z7 4374 aaKnown RBP9.37□□□□□ -0.91
LYSMD4-211ENST00000604213 IGLV7-46A0A075B6I9 117 aa9.37□□□□□ -0.91
LYSMD4-211ENST00000604213 COA5Q86WW8 74 aa9.36□□□□□ -0.91
LYSMD4-211ENST00000604213 NOTCH1P46531 2555 aa9.33□□□□□ -0.92
LYSMD4-211ENST00000604213 Q75L30 129 aa9.33□□□□□ -0.92
LYSMD4-211ENST00000604213 STAB1Q9NY15 2570 aa9.32□□□□□ -0.92
LYSMD4-211ENST00000604213 LOC101927531A0A1B0GV80 90 aa9.32□□□□□ -0.92
LYSMD4-211ENST00000604213 KRTAP24-1Q3LI83 254 aa9.32□□□□□ -0.92
LYSMD4-211ENST00000604213 ASB16-AS1Q495Z4 193 aa9.32□□□□□ -0.92
LYSMD4-211ENST00000604213 DNAH9Q9NYC9 4486 aa9.32□□□□□ -0.92
LYSMD4-211ENST00000604213 LYSTQ99698 3801 aa9.32□□□□□ -0.92
LYSMD4-211ENST00000604213 Q96NJ1 140 aa9.3□□□□□ -0.92
LYSMD4-211ENST00000604213 CD164Q04900 197 aa9.3□□□□□ -0.92
LYSMD4-211ENST00000604213 PCOTHQ58A44 107 aa9.3□□□□□ -0.92
LYSMD4-211ENST00000604213 LCA10Q71F78 164 aa9.3□□□□□ -0.92
LYSMD4-211ENST00000604213 KRTAP13-1Q8IUC0 172 aa9.29□□□□□ -0.92
LYSMD4-211ENST00000604213 FBN1P35555 2871 aaKnown RBP9.28□□□□□ -0.92
LYSMD4-211ENST00000604213 C14orf177Q52M58 125 aa9.28□□□□□ -0.92
LYSMD4-211ENST00000604213 TP53AIP1Q9HCN2 124 aa9.28□□□□□ -0.92
LYSMD4-211ENST00000604213 TENM2Q9NT68 2774 aa9.27□□□□□ -0.92
LYSMD4-211ENST00000604213 Q6ZR54 194 aa9.26□□□□□ -0.93
LYSMD4-211ENST00000604213 A6NED7 52 aa9.26□□□□□ -0.93
LYSMD4-211ENST00000604213 MOBPQ13875 183 aa9.26□□□□□ -0.93
LYSMD4-211ENST00000604213 NBEAL1Q6ZS30 2694 aa9.26□□□□□ -0.93
LYSMD4-211ENST00000604213 C8orf17Q9NRJ1 99 aa9.25□□□□□ -0.93
LYSMD4-211ENST00000604213 ATP11AUNQ6ZP68 121 aa9.24□□□□□ -0.93
LYSMD4-211ENST00000604213 SPTSSBQ8NFR3 76 aa9.24□□□□□ -0.93
LYSMD4-211ENST00000604213 PANO1I0J062 215 aa9.23□□□□□ -0.93
LYSMD4-211ENST00000604213 K7EIL1 84 aa9.23□□□□□ -0.93
LYSMD4-211ENST00000604213 PLAC8Q9NZF1 115 aa9.23□□□□□ -0.93
LYSMD4-211ENST00000604213 COL6A5A8TX70 2615 aa9.23□□□□□ -0.93
LYSMD4-211ENST00000604213 IGLV9-49A0A0B4J1Y8 123 aa9.22□□□□□ -0.93
LYSMD4-211ENST00000604213 LINC01558Q9Y6Z2 57 aa9.22□□□□□ -0.93
LYSMD4-211ENST00000604213 KTN1-AS1Q86SY8 53 aa9.21□□□□□ -0.94
LYSMD4-211ENST00000604213 SPAG11AQ6PDA7 123 aa9.2□□□□□ -0.94
LYSMD4-211ENST00000604213 UBE2DNLQ8IWF7 75 aa9.2□□□□□ -0.94
LYSMD4-211ENST00000604213 CDC42SE1Q9NRR8 79 aa9.2□□□□□ -0.94
LYSMD4-211ENST00000604213 A0A1B0GVX0 72 aa9.19□□□□□ -0.94
LYSMD4-211ENST00000604213 IGHV6-1A0A0B4J1U7 121 aa9.18□□□□□ -0.94
LYSMD4-211ENST00000604213 CSMD3Q7Z407 3707 aa9.18□□□□□ -0.94
LYSMD4-211ENST00000604213 A6NN06 94 aa9.17□□□□□ -0.94
LYSMD4-211ENST00000604213 HRES1P13985 223 aa9.17□□□□□ -0.94
LYSMD4-211ENST00000604213 NDUFS5O43920 106 aa9.17□□□□□ -0.94
LYSMD4-211ENST00000604213 LINC00483Q53H64 154 aa9.17□□□□□ -0.94
LYSMD4-211ENST00000604213 APLNQ9ULZ1 77 aa9.16□□□□□ -0.94
LYSMD4-211ENST00000604213 DYNC2H1Q8NCM8 4307 aaKnown RBP9.15□□□□□ -0.94
LYSMD4-211ENST00000604213 MRPL34Q9BQ48 92 aaKnown RBP9.14□□□□□ -0.95
LYSMD4-211ENST00000604213 A0A087X002 238 aa9.13□□□□□ -0.95
LYSMD4-211ENST00000604213 NOTCH2NLQ7Z3S9 236 aa9.13□□□□□ -0.95
LYSMD4-211ENST00000604213 STAB2Q8WWQ8 2551 aa9.13□□□□□ -0.95
LYSMD4-211ENST00000604213 COL7A1Q02388 2944 aa9.12□□□□□ -0.95
LYSMD4-211ENST00000604213 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.12□□□□□ -0.95
LYSMD4-211ENST00000604213 DNAH7Q8WXX0 4024 aa9.11□□□□□ -0.95
LYSMD4-211ENST00000604213 CDK2AP2O75956 126 aa9.11□□□□□ -0.95
LYSMD4-211ENST00000604213 SPINK7P58062 85 aa9.1□□□□□ -0.95
LYSMD4-211ENST00000604213 SPACA4Q8TDM5 124 aa9.1□□□□□ -0.95
LYSMD4-211ENST00000604213 WWC2-AS2Q96NR7 200 aa9.1□□□□□ -0.95
LYSMD4-211ENST00000604213 Q6ZRN7 208 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms