RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 NMES1Q9C002 83 aa0.39□□□□□ -2.35
UBE2E3-212ENST00000602888 GPR98Q8WXG9 6306 aa0.39□□□□□ -2.35
UBE2E3-212ENST00000602888 NCOR1O75376 2440 aa0.38□□□□□ -2.35
UBE2E3-212ENST00000602888 CSMD3Q7Z407 3707 aa0.38□□□□□ -2.35
UBE2E3-212ENST00000602888 CHD9Q3L8U1 2897 aa0.38□□□□□ -2.35
UBE2E3-212ENST00000602888 RPS27P42677 84 aaKnown RBP0.38□□□□□ -2.35
UBE2E3-212ENST00000602888 RPS27LQ71UM5 84 aaKnown RBP0.38□□□□□ -2.35
UBE2E3-212ENST00000602888 KIF21BO75037 1637 aa0.38□□□□□ -2.35
UBE2E3-212ENST00000602888 KNL1Q8NG31 2342 aa0.37□□□□□ -2.35
UBE2E3-212ENST00000602888 SPTBN2O15020 2390 aa0.37□□□□□ -2.35
UBE2E3-212ENST00000602888 VWFP04275 2813 aa0.37□□□□□ -2.35
UBE2E3-212ENST00000602888 MINOS1Q5TGZ0 78 aa0.37□□□□□ -2.35
UBE2E3-212ENST00000602888 CMC2Q9NRP2 79 aa0.37□□□□□ -2.35
UBE2E3-212ENST00000602888 NAV2Q8IVL1 2488 aa0.36□□□□□ -2.35
UBE2E3-212ENST00000602888 PRM1P04553 51 aa0.36□□□□□ -2.35
UBE2E3-212ENST00000602888 PLNP26678 52 aa0.36□□□□□ -2.35
UBE2E3-212ENST00000602888 SPINK6Q6UWN8 80 aa0.36□□□□□ -2.35
UBE2E3-212ENST00000602888 LINC00308Q8TCZ7 52 aa0.36□□□□□ -2.35
UBE2E3-212ENST00000602888 C6orf48Q9UBA6 75 aa0.36□□□□□ -2.35
UBE2E3-212ENST00000602888 F8P00451 2351 aa0.36□□□□□ -2.35
UBE2E3-212ENST00000602888 SPINK4O60575 86 aa0.35□□□□□ -2.35
UBE2E3-212ENST00000602888 SERF2P84101 59 aa0.35□□□□□ -2.35
UBE2E3-212ENST00000602888 TFF3Q07654 80 aa0.35□□□□□ -2.35
UBE2E3-212ENST00000602888 TIMM8BQ9Y5J9 83 aaPredicted RBP0.35□□□□□ -2.35
UBE2E3-212ENST00000602888 SPTBN1Q01082 2364 aaKnown RBP0.35□□□□□ -2.35
UBE2E3-212ENST00000602888 WNK2Q9Y3S1 2297 aa0.35□□□□□ -2.35
UBE2E3-212ENST00000602888 GVINP1Q7Z2Y8 2422 aa0.35□□□□□ -2.35
UBE2E3-212ENST00000602888 ABCA12Q86UK0 2595 aa0.34□□□□□ -2.35
UBE2E3-212ENST00000602888 SMIM27A0A1W2PRY6 76 aa0.34□□□□□ -2.36
UBE2E3-212ENST00000602888 CLTCL1P53675 1640 aa0.34□□□□□ -2.36
UBE2E3-212ENST00000602888 TRPM2O94759 1503 aa0.33□□□□□ -2.36
UBE2E3-212ENST00000602888 ATP7AQ04656 1500 aa0.33□□□□□ -2.36
UBE2E3-212ENST00000602888 OTOGQ6ZRI0 2925 aa0.33□□□□□ -2.36
UBE2E3-212ENST00000602888 PKDREJQ9NTG1 2253 aa0.33□□□□□ -2.36
UBE2E3-212ENST00000602888 LINC01546A6NGU7 62 aa0.33□□□□□ -2.36
UBE2E3-212ENST00000602888 TOMM5Q8N4H5 51 aa0.33□□□□□ -2.36
UBE2E3-212ENST00000602888 TNXBP22105 4242 aa0.33□□□□□ -2.36
UBE2E3-212ENST00000602888 ANK2Q01484 3957 aa0.32□□□□□ -2.36
UBE2E3-212ENST00000602888 BSNQ9UPA5 3926 aa0.32□□□□□ -2.36
UBE2E3-212ENST00000602888 MUC5ACP98088 5654 aa0.32□□□□□ -2.36
UBE2E3-212ENST00000602888 DEFB106AQ8N104 65 aa0.32□□□□□ -2.36
UBE2E3-212ENST00000602888 ABRACLQ9P1F3 81 aa0.32□□□□□ -2.36
UBE2E3-212ENST00000602888 S4R3F8 94 aa0.32□□□□□ -2.36
UBE2E3-212ENST00000602888 IGF2RP11717 2491 aa0.32□□□□□ -2.36
UBE2E3-212ENST00000602888 CSPG4Q6UVK1 2322 aa0.32□□□□□ -2.36
UBE2E3-212ENST00000602888 TENM4Q6N022 2769 aa0.31□□□□□ -2.36
UBE2E3-212ENST00000602888 TPRP12270 2363 aaKnown RBP0.31□□□□□ -2.36
UBE2E3-212ENST00000602888 H0YGX0 51 aa0.31□□□□□ -2.36
UBE2E3-212ENST00000602888 WT1-ASQ06250 92 aa0.31□□□□□ -2.36
UBE2E3-212ENST00000602888 TMEM167BQ9NRX6 74 aa0.31□□□□□ -2.36
UBE2E3-212ENST00000602888 PCNX1Q96RV3 2341 aa0.31□□□□□ -2.36
UBE2E3-212ENST00000602888 SYNE1Q8NF91 8797 aaKnown RBP0.31□□□□□ -2.36
UBE2E3-212ENST00000602888 MDN1Q9NU22 5596 aa0.31□□□□□ -2.36
UBE2E3-212ENST00000602888 BDP1A6H8Y1 2624 aa0.31□□□□□ -2.36
UBE2E3-212ENST00000602888 SPINK1P00995 79 aa0.3□□□□□ -2.36
UBE2E3-212ENST00000602888 PDE4DIPQ5VU43 2346 aa0.29□□□□□ -2.36
UBE2E3-212ENST00000602888 M0R2T5 61 aa0.29□□□□□ -2.36
UBE2E3-212ENST00000602888 DEFB135Q30KP9 77 aa0.29□□□□□ -2.36
UBE2E3-212ENST00000602888 U3KQA8 63 aa0.29□□□□□ -2.36
UBE2E3-212ENST00000602888 PRRC2CQ9Y520 2896 aaKnown RBP0.29□□□□□ -2.36
UBE2E3-212ENST00000602888 CHD6Q8TD26 2715 aa0.29□□□□□ -2.36
UBE2E3-212ENST00000602888 AKAP6Q13023 2319 aa0.29□□□□□ -2.36
UBE2E3-212ENST00000602888 DSPP15924 2871 aaKnown RBP0.28□□□□□ -2.36
UBE2E3-212ENST00000602888 FAT2Q9NYQ8 4349 aa0.28□□□□□ -2.36
UBE2E3-212ENST00000602888 PRLHP81277 87 aa0.28□□□□□ -2.36
UBE2E3-212ENST00000602888 PIEZO1Q92508 2521 aa0.27□□□□□ -2.37
UBE2E3-212ENST00000602888 SYNE2Q8WXH0 6885 aaKnown RBP0.27□□□□□ -2.37
UBE2E3-212ENST00000602888 TRANK1O15050 2925 aa0.27□□□□□ -2.37
UBE2E3-212ENST00000602888 WFDC10BQ8IUB3 73 aa0.27□□□□□ -2.37
UBE2E3-212ENST00000602888 KAAG1Q9UBP8 84 aa0.27□□□□□ -2.37
UBE2E3-212ENST00000602888 ABCA2Q9BZC7 2435 aa0.27□□□□□ -2.37
UBE2E3-212ENST00000602888 LRP1Q07954 4544 aaKnown RBP0.27□□□□□ -2.37
UBE2E3-212ENST00000602888 SAMD9LQ8IVG5 1584 aa0.27□□□□□ -2.37
UBE2E3-212ENST00000602888 FAT4Q6V0I7 4981 aa0.27□□□□□ -2.37
UBE2E3-212ENST00000602888 TNRC18O15417 2968 aaPredicted RBP0.27□□□□□ -2.37
UBE2E3-212ENST00000602888 LYSTQ99698 3801 aa0.26□□□□□ -2.37
UBE2E3-212ENST00000602888 UBR5O95071 2799 aaPredicted RBP0.25□□□□□ -2.37
UBE2E3-212ENST00000602888 ATRQ13535 2644 aa0.25□□□□□ -2.37
UBE2E3-212ENST00000602888 DUOX1Q9NRD9 1551 aa0.25□□□□□ -2.37
UBE2E3-212ENST00000602888 MAST4O15021 2626 aa0.25□□□□□ -2.37
UBE2E3-212ENST00000602888 EP300Q09472 2414 aaPredicted RBP0.25□□□□□ -2.37
UBE2E3-212ENST00000602888 PDZD2O15018 2839 aa0.24□□□□□ -2.37
UBE2E3-212ENST00000602888 AKAP13Q12802 2813 aa0.24□□□□□ -2.37
UBE2E3-212ENST00000602888 GCC2Q8IWJ2 1684 aa0.24□□□□□ -2.37
UBE2E3-212ENST00000602888 SPRR2DP22532 72 aa0.24□□□□□ -2.37
UBE2E3-212ENST00000602888 SMIM2Q9BVW6 85 aa0.24□□□□□ -2.37
UBE2E3-212ENST00000602888 FSIP2Q5CZC0 6907 aa0.24□□□□□ -2.37
UBE2E3-212ENST00000602888 A0A0C4DFX4 3053 aa0.24□□□□□ -2.37
UBE2E3-212ENST00000602888 PKD1L1Q8TDX9 2849 aa0.23□□□□□ -2.37
UBE2E3-212ENST00000602888 HRNRQ86YZ3 2850 aaPredicted RBP0.23□□□□□ -2.37
UBE2E3-212ENST00000602888 MMP24-AS1A0A0U1RRL7 71 aa0.23□□□□□ -2.37
UBE2E3-212ENST00000602888 MYCBP2O75592 4640 aa0.23□□□□□ -2.37
UBE2E3-212ENST00000602888 MROH2BQ7Z745 1585 aa0.23□□□□□ -2.37
UBE2E3-212ENST00000602888 PRKDCP78527 4128 aaKnown RBP0.22□□□□□ -2.37
UBE2E3-212ENST00000602888 HMCN2Q8NDA2 5059 aa0.22□□□□□ -2.37
UBE2E3-212ENST00000602888 NBASA2RRP1 2371 aa0.22□□□□□ -2.37
UBE2E3-212ENST00000602888 IGLV5-48A0A075B6I7 105 aa0.22□□□□□ -2.37
UBE2E3-212ENST00000602888 H0YGG7 62 aa0.22□□□□□ -2.37
UBE2E3-212ENST00000602888 H3BUA1 57 aa0.22□□□□□ -2.37
UBE2E3-212ENST00000602888 NDUFA1O15239 70 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms