RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 LIMD2Q9BT23 127 aa9.69□□□□□ -0.86
IRF3-230ENST00000601809 FAT4Q6V0I7 4981 aa9.68□□□□□ -0.86
IRF3-230ENST00000601809 BVES-AS1Q5T3Y7 98 aa9.67□□□□□ -0.86
IRF3-230ENST00000601809 IGLV8-61A0A075B6I0 122 aa9.66□□□□□ -0.86
IRF3-230ENST00000601809 CEND1Q8N111 149 aa9.66□□□□□ -0.86
IRF3-230ENST00000601809 H7C2G1 150 aa9.65□□□□□ -0.86
IRF3-230ENST00000601809 ASB16-AS1Q495Z4 193 aa9.65□□□□□ -0.86
IRF3-230ENST00000601809 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.65□□□□□ -0.86
IRF3-230ENST00000601809 FXYD2P54710 66 aa9.64□□□□□ -0.87
IRF3-230ENST00000601809 XP32Q5T750 250 aa9.64□□□□□ -0.87
IRF3-230ENST00000601809 RAB37Q96AX2 223 aa9.62□□□□□ -0.87
IRF3-230ENST00000601809 TMA7Q9Y2S6 64 aaKnown RBP9.62□□□□□ -0.87
IRF3-230ENST00000601809 PPDPFLQ8WWR9 84 aa9.61□□□□□ -0.87
IRF3-230ENST00000601809 FAM218AQ96MZ4 157 aa9.61□□□□□ -0.87
IRF3-230ENST00000601809 C1orf195Q5TG92 126 aa9.6□□□□□ -0.87
IRF3-230ENST00000601809 KRTAP4-1Q9BYQ7 146 aa9.6□□□□□ -0.87
IRF3-230ENST00000601809 IGFL1Q6UW32 110 aa9.58□□□□□ -0.88
IRF3-230ENST00000601809 PRO1854Q9UHT4 67 aa9.58□□□□□ -0.88
IRF3-230ENST00000601809 H0YGX0 51 aa9.57□□□□□ -0.88
IRF3-230ENST00000601809 OCIAD2Q56VL3 154 aa9.57□□□□□ -0.88
IRF3-230ENST00000601809 TMEM238LA0A1B0GVL6 79 aa9.56□□□□□ -0.88
IRF3-230ENST00000601809 A6NJY4 79 aa9.56□□□□□ -0.88
IRF3-230ENST00000601809 F8WEM9 126 aa9.56□□□□□ -0.88
IRF3-230ENST00000601809 HSD52Q0P140 79 aa9.56□□□□□ -0.88
IRF3-230ENST00000601809 LCE2AQ5TA79 106 aaPredicted RBP9.56□□□□□ -0.88
IRF3-230ENST00000601809 Q6JHZ5 121 aa9.56□□□□□ -0.88
IRF3-230ENST00000601809 CLEC2BQ92478 149 aa9.55□□□□□ -0.88
IRF3-230ENST00000601809 A0A0U1RQV1 116 aa9.54□□□□□ -0.88
IRF3-230ENST00000601809 TRIAP1O43715 76 aa9.53□□□□□ -0.88
IRF3-230ENST00000601809 SEC61BP60468 96 aaKnown RBP9.53□□□□□ -0.88
IRF3-230ENST00000601809 TRBV7-7A0A0K0K1E9 115 aa9.52□□□□□ -0.89
IRF3-230ENST00000601809 A0A1B0GX51 115 aa9.52□□□□□ -0.89
IRF3-230ENST00000601809 UQCR10Q9UDW1 63 aa9.51□□□□□ -0.89
IRF3-230ENST00000601809 C9orf92A6NGG3 77 aa9.5□□□□□ -0.89
IRF3-230ENST00000601809 H3BUT2 72 aa9.49□□□□□ -0.89
IRF3-230ENST00000601809 K7ERJ3 54 aa9.49□□□□□ -0.89
IRF3-230ENST00000601809 TCL1BO95988 128 aa9.49□□□□□ -0.89
IRF3-230ENST00000601809 SNHG12Q9BXW3 62 aa9.49□□□□□ -0.89
IRF3-230ENST00000601809 NDUFV3P56181 108 aaKnown RBP9.46□□□□□ -0.9
IRF3-230ENST00000601809 Q6Q795 121 aa9.46□□□□□ -0.9
IRF3-230ENST00000601809 SNCGO76070 127 aa9.44□□□□□ -0.9
IRF3-230ENST00000601809 PCOTHQ58A44 107 aa9.4□□□□□ -0.9
IRF3-230ENST00000601809 H3BMG7 143 aa9.38□□□□□ -0.91
IRF3-230ENST00000601809 KRTAP19-2Q3LHN2 52 aa9.38□□□□□ -0.91
IRF3-230ENST00000601809 TEN1Q86WV5 123 aa9.38□□□□□ -0.91
IRF3-230ENST00000601809 GHRHP01286 108 aa9.37□□□□□ -0.91
IRF3-230ENST00000601809 FABP2P12104 132 aa9.37□□□□□ -0.91
IRF3-230ENST00000601809 RPL37P61927 97 aaKnown RBP9.37□□□□□ -0.91
IRF3-230ENST00000601809 PSMB2P49721 201 aa9.36□□□□□ -0.91
IRF3-230ENST00000601809 A0A1W2PNM2 257 aa9.35□□□□□ -0.91
IRF3-230ENST00000601809 LCE2CQ5TA81 110 aa9.35□□□□□ -0.91
IRF3-230ENST00000601809 Q96NJ1 140 aa9.34□□□□□ -0.91
IRF3-230ENST00000601809 ORMDL1Q9P0S3 153 aa9.34□□□□□ -0.91
IRF3-230ENST00000601809 LST1O00453 97 aa9.33□□□□□ -0.92
IRF3-230ENST00000601809 COX6CP09669 75 aa9.33□□□□□ -0.92
IRF3-230ENST00000601809 H3BQ85 93 aa9.32□□□□□ -0.92
IRF3-230ENST00000601809 DNAL4O96015 105 aa9.32□□□□□ -0.92
IRF3-230ENST00000601809 SMIM6P0DI80 62 aa9.32□□□□□ -0.92
IRF3-230ENST00000601809 SS18L2Q9UHA2 77 aa9.32□□□□□ -0.92
IRF3-230ENST00000601809 A0A087WSZ3 146 aa9.31□□□□□ -0.92
IRF3-230ENST00000601809 TRACP01848 142 aa9.31□□□□□ -0.92
IRF3-230ENST00000601809 TMEM256-PLSCR3K7ERE1 68 aa9.3□□□□□ -0.92
IRF3-230ENST00000601809 UBE2V1Q13404 147 aa9.28□□□□□ -0.92
IRF3-230ENST00000601809 TRBV7-4A0A0J9YYF1 115 aa9.26□□□□□ -0.93
IRF3-230ENST00000601809 OBSCN-AS1Q96MR7 158 aa9.26□□□□□ -0.93
IRF3-230ENST00000601809 ANKRD29Q8N6D5 301 aa9.25□□□□□ -0.93
IRF3-230ENST00000601809 Q75L30 129 aa9.24□□□□□ -0.93
IRF3-230ENST00000601809 A0A1B0GV72 72 aa9.23□□□□□ -0.93
IRF3-230ENST00000601809 M0R143 59 aa9.23□□□□□ -0.93
IRF3-230ENST00000601809 LOC105371267A0A1B0GV96 52 aa9.22□□□□□ -0.93
IRF3-230ENST00000601809 SCGB1C2P0DMR2 95 aa9.22□□□□□ -0.93
IRF3-230ENST00000601809 C20orf166-AS1Q96NR2 134 aa9.2□□□□□ -0.94
IRF3-230ENST00000601809 NAA38Q9BRA0 125 aaKnown RBP9.19□□□□□ -0.94
IRF3-230ENST00000601809 LINC00472Q9H8W2 130 aa9.19□□□□□ -0.94
IRF3-230ENST00000601809 FLGP20930 4061 aaPredicted RBP9.18□□□□□ -0.94
IRF3-230ENST00000601809 CCKP06307 115 aa9.18□□□□□ -0.94
IRF3-230ENST00000601809 A8MUU9 505 aa9.17□□□□□ -0.94
IRF3-230ENST00000601809 BAALC-AS2P0C853 105 aa9.17□□□□□ -0.94
IRF3-230ENST00000601809 MT1HP80294 61 aa9.17□□□□□ -0.94
IRF3-230ENST00000601809 KRTAP9-2Q9BYQ4 174 aa9.16□□□□□ -0.94
IRF3-230ENST00000601809 RBM3P98179 157 aaKnown RBP9.15□□□□□ -0.94
IRF3-230ENST00000601809 KRTAP16-1A8MUX0 517 aa9.13□□□□□ -0.95
IRF3-230ENST00000601809 TSTD3H0UI37 97 aa9.13□□□□□ -0.95
IRF3-230ENST00000601809 LCE2BO14633 110 aa9.13□□□□□ -0.95
IRF3-230ENST00000601809 DSCR10P59022 87 aa9.13□□□□□ -0.95
IRF3-230ENST00000601809 ATXN8Q156A1 80 aa9.13□□□□□ -0.95
IRF3-230ENST00000601809 SIGMAR1Q99720 223 aa9.12□□□□□ -0.95
IRF3-230ENST00000601809 IGKV4-1P06312 121 aa9.11□□□□□ -0.95
IRF3-230ENST00000601809 ATP11AUNQ6ZP68 121 aa9.1□□□□□ -0.95
IRF3-230ENST00000601809 NOTCH2NLQ7Z3S9 236 aa9.1□□□□□ -0.95
IRF3-230ENST00000601809 DEFB116Q30KQ4 102 aa9.09□□□□□ -0.95
IRF3-230ENST00000601809 DSCR8Q96T75 97 aa9.09□□□□□ -0.95
IRF3-230ENST00000601809 C9JAW5 83 aa9.06□□□□□ -0.96
IRF3-230ENST00000601809 LINC00313P59037 77 aa9.06□□□□□ -0.96
IRF3-230ENST00000601809 Q6ZQT0 140 aa9.06□□□□□ -0.96
IRF3-230ENST00000601809 VPS25Q9BRG1 176 aa9.06□□□□□ -0.96
IRF3-230ENST00000601809 LOC110117498A0A087WWA1 95 aa9.04□□□□□ -0.96
IRF3-230ENST00000601809 BATFQ16520 125 aa9.04□□□□□ -0.96
IRF3-230ENST00000601809 TRBV20-1A0A075B6N2 111 aa9.03□□□□□ -0.96
IRF3-230ENST00000601809 JMJD7-PLA2G4BH0Y9G9 81 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms