RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 IGLV5-48A0A075B6I7 105 aa8.66□□□□□ -1.02
USE1-210ENST00000601662 SPRR1BP22528 89 aa8.66□□□□□ -1.02
USE1-210ENST00000601662 GAGE2AQ6NT46 116 aa8.66□□□□□ -1.02
USE1-210ENST00000601662 K7EP34 96 aa8.65□□□□□ -1.02
USE1-210ENST00000601662 TMEM256-PLSCR3K7ERE1 68 aa8.65□□□□□ -1.02
USE1-210ENST00000601662 H3BMG7 143 aa8.64□□□□□ -1.03
USE1-210ENST00000601662 LINC00483Q53H64 154 aa8.64□□□□□ -1.03
USE1-210ENST00000601662 TNXBP22105 4242 aa8.64□□□□□ -1.03
USE1-210ENST00000601662 BAALC-AS2P0C853 105 aa8.63□□□□□ -1.03
USE1-210ENST00000601662 LINC01547P58512 204 aaPredicted RBP8.63□□□□□ -1.03
USE1-210ENST00000601662 FAM229BQ4G0N7 80 aa8.63□□□□□ -1.03
USE1-210ENST00000601662 Q8N377 158 aa8.63□□□□□ -1.03
USE1-210ENST00000601662 C9JAW5 83 aa8.62□□□□□ -1.03
USE1-210ENST00000601662 LAMTOR3Q9UHA4 124 aa8.62□□□□□ -1.03
USE1-210ENST00000601662 KRTAP10-8P60410 259 aa8.61□□□□□ -1.03
USE1-210ENST00000601662 PRR26Q8N8Z3 221 aa8.6□□□□□ -1.03
USE1-210ENST00000601662 KRTAP1-4P0C5Y4 121 aa8.59□□□□□ -1.03
USE1-210ENST00000601662 CRYGAP11844 174 aa8.59□□□□□ -1.03
USE1-210ENST00000601662 UBE2V1Q13404 147 aa8.59□□□□□ -1.03
USE1-210ENST00000601662 A0A1B0GV90 55 aa8.58□□□□□ -1.04
USE1-210ENST00000601662 H3BT86 120 aa8.58□□□□□ -1.04
USE1-210ENST00000601662 F8WEM9 126 aa8.57□□□□□ -1.04
USE1-210ENST00000601662 NDUFV3P56181 108 aaKnown RBP8.57□□□□□ -1.04
USE1-210ENST00000601662 ANAPC11Q9NYG5 84 aa8.57□□□□□ -1.04
USE1-210ENST00000601662 F8W1H4 67 aa8.56□□□□□ -1.04
USE1-210ENST00000601662 SMIM29Q86T20 159 aa8.56□□□□□ -1.04
USE1-210ENST00000601662 ANKRD29Q8N6D5 301 aa8.56□□□□□ -1.04
USE1-210ENST00000601662 HMCN2Q8NDA2 5059 aa8.56□□□□□ -1.04
USE1-210ENST00000601662 IGLV9-49A0A0B4J1Y8 123 aa8.53□□□□□ -1.04
USE1-210ENST00000601662 SSBP3-AS1Q7Z2R9 100 aa8.53□□□□□ -1.04
USE1-210ENST00000601662 C3orf22Q8N5N4 141 aa8.53□□□□□ -1.04
USE1-210ENST00000601662 JMJD7-PLA2G4BH0Y9G9 81 aa8.52□□□□□ -1.05
USE1-210ENST00000601662 PRO0461Q9UI25 63 aa8.52□□□□□ -1.05
USE1-210ENST00000601662 IGLV8-61A0A075B6I0 122 aa8.51□□□□□ -1.05
USE1-210ENST00000601662 A0A087X002 238 aa8.51□□□□□ -1.05
USE1-210ENST00000601662 C9orf153Q5TBE3 101 aa8.51□□□□□ -1.05
USE1-210ENST00000601662 Q6JHZ5 121 aa8.51□□□□□ -1.05
USE1-210ENST00000601662 MTURNQ8N3F0 131 aa8.51□□□□□ -1.05
USE1-210ENST00000601662 Q8NBF4 154 aa8.51□□□□□ -1.05
USE1-210ENST00000601662 TYMSOSQ8TAI1 123 aa8.51□□□□□ -1.05
USE1-210ENST00000601662 RBM3P98179 157 aaKnown RBP8.5□□□□□ -1.05
USE1-210ENST00000601662 MOBPQ13875 183 aa8.49□□□□□ -1.05
USE1-210ENST00000601662 KRTAP13-2Q52LG2 175 aa8.49□□□□□ -1.05
USE1-210ENST00000601662 SMCPP49901 116 aaPredicted RBP8.48□□□□□ -1.05
USE1-210ENST00000601662 DSCR8Q96T75 97 aa8.47□□□□□ -1.05
USE1-210ENST00000601662 PDE6GP18545 87 aa8.45□□□□□ -1.06
USE1-210ENST00000601662 C21orf62-AS1Q17RA5 79 aa8.45□□□□□ -1.06
USE1-210ENST00000601662 OBSCN-AS1Q96MR7 158 aa8.45□□□□□ -1.06
USE1-210ENST00000601662 C4orf48Q5BLP8 95 aa8.44□□□□□ -1.06
USE1-210ENST00000601662 SPAG11AQ6PDA7 123 aa8.43□□□□□ -1.06
USE1-210ENST00000601662 TEN1Q86WV5 123 aa8.43□□□□□ -1.06
USE1-210ENST00000601662 A0A1B0GV72 72 aa8.42□□□□□ -1.06
USE1-210ENST00000601662 CD164Q04900 197 aa8.42□□□□□ -1.06
USE1-210ENST00000601662 IGFL1Q6UW32 110 aa8.42□□□□□ -1.06
USE1-210ENST00000601662 TRBV7-4A0A0J9YYF1 115 aa8.41□□□□□ -1.06
USE1-210ENST00000601662 LOC110117498A0A087WWA1 95 aa8.4□□□□□ -1.06
USE1-210ENST00000601662 ETDBQ3ZM63 59 aa8.4□□□□□ -1.06
USE1-210ENST00000601662 LINC00304Q8N9R0 145 aa8.4□□□□□ -1.06
USE1-210ENST00000601662 C14orf132Q9NPU4 83 aa8.39□□□□□ -1.07
USE1-210ENST00000601662 SPINK1P00995 79 aa8.38□□□□□ -1.07
USE1-210ENST00000601662 Q6Q795 121 aa8.38□□□□□ -1.07
USE1-210ENST00000601662 UBR4Q5T4S7 5183 aa8.38□□□□□ -1.07
USE1-210ENST00000601662 CCKP06307 115 aa8.37□□□□□ -1.07
USE1-210ENST00000601662 Q6ZQT0 140 aa8.37□□□□□ -1.07
USE1-210ENST00000601662 A0A0G2JQZ4 141 aa8.36□□□□□ -1.07
USE1-210ENST00000601662 A0A1B0GW54 56 aa8.36□□□□□ -1.07
USE1-210ENST00000601662 A0A1W2PNM2 257 aa8.34□□□□□ -1.07
USE1-210ENST00000601662 RPS29P62273 56 aaKnown RBP8.34□□□□□ -1.07
USE1-210ENST00000601662 HRCT1Q6UXD1 115 aa8.34□□□□□ -1.07
USE1-210ENST00000601662 LRP2P98164 4655 aa8.34□□□□□ -1.07
USE1-210ENST00000601662 TRBV7-7A0A0K0K1E9 115 aa8.33□□□□□ -1.08
USE1-210ENST00000601662 PRR4Q16378 134 aa8.33□□□□□ -1.08
USE1-210ENST00000601662 VPS25Q9BRG1 176 aa8.33□□□□□ -1.08
USE1-210ENST00000601662 LIMD2Q9BT23 127 aa8.32□□□□□ -1.08
USE1-210ENST00000601662 Q5XG85 94 aa8.3□□□□□ -1.08
USE1-210ENST00000601662 SS18L2Q9UHA2 77 aa8.3□□□□□ -1.08
USE1-210ENST00000601662 A0A087WSZ3 146 aa8.27□□□□□ -1.09
USE1-210ENST00000601662 LPAP08519 4548 aa8.25□□□□□ -1.09
USE1-210ENST00000601662 J3QR89 54 aa8.25□□□□□ -1.09
USE1-210ENST00000601662 ASB16-AS1Q495Z4 193 aa8.25□□□□□ -1.09
USE1-210ENST00000601662 RETNLBQ9BQ08 111 aa8.25□□□□□ -1.09
USE1-210ENST00000601662 ACYP1P07311 99 aa8.24□□□□□ -1.09
USE1-210ENST00000601662 FAM240AA0A1B0GVK7 77 aa8.21□□□□□ -1.1
USE1-210ENST00000601662 NREPQ16612 68 aa8.2□□□□□ -1.1
USE1-210ENST00000601662 UBL5Q9BZL1 73 aa8.18□□□□□ -1.1
USE1-210ENST00000601662 C1orf195Q5TG92 126 aa8.17□□□□□ -1.1
USE1-210ENST00000601662 LINC00846Q9NV44 126 aa8.17□□□□□ -1.1
USE1-210ENST00000601662 J3KT08 172 aa8.15□□□□□ -1.1
USE1-210ENST00000601662 K7ERU9 68 aa8.15□□□□□ -1.1
USE1-210ENST00000601662 FP248Q71RG6 208 aaPredicted RBP8.15□□□□□ -1.1
USE1-210ENST00000601662 LINC00472Q9H8W2 130 aa8.15□□□□□ -1.1
USE1-210ENST00000601662 RNF213Q63HN8 5207 aa8.15□□□□□ -1.11
USE1-210ENST00000601662 IGLV7-46A0A075B6I9 117 aa8.14□□□□□ -1.11
USE1-210ENST00000601662 Q6ZVQ6 151 aa8.13□□□□□ -1.11
USE1-210ENST00000601662 Q96NJ1 140 aa8.12□□□□□ -1.11
USE1-210ENST00000601662 IGKV4-1P06312 121 aa8.11□□□□□ -1.11
USE1-210ENST00000601662 BPY2O14599 106 aa8.09□□□□□ -1.11
USE1-210ENST00000601662 SIGMAR1Q99720 223 aa8.09□□□□□ -1.11
USE1-210ENST00000601662 DEFB116Q30KQ4 102 aa8.08□□□□□ -1.12
USE1-210ENST00000601662 NDUFB1O75438 58 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms