RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 SNHG12Q9BXW3 62 aa5.61□□□□□ -1.51
HIF3A-219ENST00000600879 DHRS4-AS1Q9P1J3 65 aa5.61□□□□□ -1.51
HIF3A-219ENST00000600879 H0YGX0 51 aa5.6□□□□□ -1.51
HIF3A-219ENST00000600879 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.59□□□□□ -1.51
HIF3A-219ENST00000600879 SLC25A20O43772 301 aa5.59□□□□□ -1.51
HIF3A-219ENST00000600879 ERC2-IT1O76042 136 aa5.59□□□□□ -1.51
HIF3A-219ENST00000600879 COX6CP09669 75 aa5.59□□□□□ -1.51
HIF3A-219ENST00000600879 NAA38Q9BRA0 125 aaKnown RBP5.59□□□□□ -1.51
HIF3A-219ENST00000600879 SCGB1C2P0DMR2 95 aa5.58□□□□□ -1.52
HIF3A-219ENST00000600879 KRTAP19-2Q3LHN2 52 aa5.58□□□□□ -1.52
HIF3A-219ENST00000600879 C4orf48Q5BLP8 95 aa5.58□□□□□ -1.52
HIF3A-219ENST00000600879 LINC00575Q6W349 94 aa5.58□□□□□ -1.52
HIF3A-219ENST00000600879 ZNF706Q9Y5V0 76 aaPredicted RBP5.58□□□□□ -1.52
HIF3A-219ENST00000600879 hADV29S1A0JD25 119 aa5.57□□□□□ -1.52
HIF3A-219ENST00000600879 TAX1BP3O14907 124 aa5.57□□□□□ -1.52
HIF3A-219ENST00000600879 SNCGO76070 127 aa5.57□□□□□ -1.52
HIF3A-219ENST00000600879 COL5A1-AS1Q5SY13 56 aa5.57□□□□□ -1.52
HIF3A-219ENST00000600879 SPAG11AQ6PDA7 123 aa5.57□□□□□ -1.52
HIF3A-219ENST00000600879 CLEC2BQ92478 149 aa5.57□□□□□ -1.52
HIF3A-219ENST00000600879 H3BUT2 72 aa5.56□□□□□ -1.52
HIF3A-219ENST00000600879 ST20-AS1Q8NBB2 130 aa5.56□□□□□ -1.52
HIF3A-219ENST00000600879 Q8NBF4 154 aa5.56□□□□□ -1.52
HIF3A-219ENST00000600879 SPRR4Q96PI1 79 aa5.56□□□□□ -1.52
HIF3A-219ENST00000600879 C9orf118A6NHY6 69 aa5.55□□□□□ -1.52
HIF3A-219ENST00000600879 LORP23490 312 aaPredicted RBP5.55□□□□□ -1.52
HIF3A-219ENST00000600879 KRTAP10-6P60371 365 aaPredicted RBP5.55□□□□□ -1.52
HIF3A-219ENST00000600879 LYRM7Q5U5X0 104 aa5.55□□□□□ -1.52
HIF3A-219ENST00000600879 GAGE2AQ6NT46 116 aa5.55□□□□□ -1.52
HIF3A-219ENST00000600879 FAM218AQ96MZ4 157 aa5.55□□□□□ -1.52
HIF3A-219ENST00000600879 A0A1B0GX51 115 aa5.54□□□□□ -1.52
HIF3A-219ENST00000600879 Q6ZQY7 126 aa5.54□□□□□ -1.52
HIF3A-219ENST00000600879 DEFB105AQ8NG35 78 aa5.54□□□□□ -1.52
HIF3A-219ENST00000600879 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.53□□□□□ -1.52
HIF3A-219ENST00000600879 LST1O00453 97 aa5.52□□□□□ -1.53
HIF3A-219ENST00000600879 DNAL4O96015 105 aa5.52□□□□□ -1.53
HIF3A-219ENST00000600879 LINC00483Q53H64 154 aa5.52□□□□□ -1.53
HIF3A-219ENST00000600879 IGLV5-48A0A075B6I7 105 aa5.51□□□□□ -1.53
HIF3A-219ENST00000600879 TEX49A0A1B0GTD5 131 aa5.51□□□□□ -1.53
HIF3A-219ENST00000600879 A0A1W2PPM0 123 aa5.51□□□□□ -1.53
HIF3A-219ENST00000600879 TCL1BO95988 128 aa5.51□□□□□ -1.53
HIF3A-219ENST00000600879 FABP2P12104 132 aa5.51□□□□□ -1.53
HIF3A-219ENST00000600879 SPRR1BP22528 89 aa5.51□□□□□ -1.53
HIF3A-219ENST00000600879 ATXN8Q156A1 80 aa5.51□□□□□ -1.53
HIF3A-219ENST00000600879 XP32Q5T750 250 aa5.51□□□□□ -1.53
HIF3A-219ENST00000600879 TRACP01848 142 aa5.5□□□□□ -1.53
HIF3A-219ENST00000600879 OCIAD2Q56VL3 154 aa5.5□□□□□ -1.53
HIF3A-219ENST00000600879 Q8N377 158 aa5.5□□□□□ -1.53
HIF3A-219ENST00000600879 TRBV20-1A0A075B6N2 111 aa5.49□□□□□ -1.53
HIF3A-219ENST00000600879 SPINK1P00995 79 aa5.49□□□□□ -1.53
HIF3A-219ENST00000600879 LAMTOR3Q9UHA4 124 aa5.49□□□□□ -1.53
HIF3A-219ENST00000600879 IGLV9-49A0A0B4J1Y8 123 aa5.48□□□□□ -1.53
HIF3A-219ENST00000600879 GHRHP01286 108 aa5.48□□□□□ -1.53
HIF3A-219ENST00000600879 PPDPFLQ8WWR9 84 aa5.48□□□□□ -1.53
HIF3A-219ENST00000600879 ORMDL1Q9P0S3 153 aa5.48□□□□□ -1.53
HIF3A-219ENST00000600879 IGLV8-61A0A075B6I0 122 aa5.47□□□□□ -1.53
HIF3A-219ENST00000600879 M0R2T5 61 aa5.47□□□□□ -1.53
HIF3A-219ENST00000600879 PCOTHQ58A44 107 aa5.47□□□□□ -1.53
HIF3A-219ENST00000600879 C9orf153Q5TBE3 101 aa5.47□□□□□ -1.53
HIF3A-219ENST00000600879 SMIM29Q86T20 159 aa5.47□□□□□ -1.53
HIF3A-219ENST00000600879 SPCS1Q9Y6A9 102 aa5.47□□□□□ -1.53
HIF3A-219ENST00000600879 F8WEM9 126 aa5.46□□□□□ -1.54
HIF3A-219ENST00000600879 H3BQ85 93 aa5.46□□□□□ -1.54
HIF3A-219ENST00000600879 MOBPQ13875 183 aa5.46□□□□□ -1.54
HIF3A-219ENST00000600879 C9JAW5 83 aa5.45□□□□□ -1.54
HIF3A-219ENST00000600879 H3BMG7 143 aa5.44□□□□□ -1.54
HIF3A-219ENST00000600879 TMEM256-PLSCR3K7ERE1 68 aa5.44□□□□□ -1.54
HIF3A-219ENST00000600879 BAALC-AS2P0C853 105 aa5.44□□□□□ -1.54
HIF3A-219ENST00000600879 K7EP34 96 aa5.43□□□□□ -1.54
HIF3A-219ENST00000600879 NDUFV3P56181 108 aaKnown RBP5.43□□□□□ -1.54
HIF3A-219ENST00000600879 SSBP3-AS1Q7Z2R9 100 aa5.43□□□□□ -1.54
HIF3A-219ENST00000600879 UBE2V1Q13404 147 aa5.42□□□□□ -1.54
HIF3A-219ENST00000600879 GTF2H5Q6ZYL4 71 aa5.42□□□□□ -1.54
HIF3A-219ENST00000600879 SSPOA2VEC9 5147 aa5.41□□□□□ -1.54
HIF3A-219ENST00000600879 A0A1B0GV72 72 aa5.41□□□□□ -1.54
HIF3A-219ENST00000600879 C9orf92A6NGG3 77 aa5.41□□□□□ -1.54
HIF3A-219ENST00000600879 MTURNQ8N3F0 131 aa5.41□□□□□ -1.54
HIF3A-219ENST00000600879 USH2AO75445 5202 aa5.4□□□□□ -1.54
HIF3A-219ENST00000600879 H3BT86 120 aa5.4□□□□□ -1.54
HIF3A-219ENST00000600879 ANKRD29Q8N6D5 301 aa5.4□□□□□ -1.54
HIF3A-219ENST00000600879 RPS29P62273 56 aaKnown RBP5.39□□□□□ -1.55
HIF3A-219ENST00000600879 Q6JHZ5 121 aa5.39□□□□□ -1.55
HIF3A-219ENST00000600879 COX6B2Q6YFQ2 88 aa5.39□□□□□ -1.55
HIF3A-219ENST00000600879 A0A0G2JQZ4 141 aa5.38□□□□□ -1.55
HIF3A-219ENST00000600879 IGFL1Q6UW32 110 aa5.38□□□□□ -1.55
HIF3A-219ENST00000600879 FLGP20930 4061 aaPredicted RBP5.37□□□□□ -1.55
HIF3A-219ENST00000600879 A0A1B0GV90 55 aa5.37□□□□□ -1.55
HIF3A-219ENST00000600879 HRCT1Q6UXD1 115 aa5.37□□□□□ -1.55
HIF3A-219ENST00000600879 JMJD7-PLA2G4BH0Y9G9 81 aa5.36□□□□□ -1.55
HIF3A-219ENST00000600879 SMCPP49901 116 aaPredicted RBP5.36□□□□□ -1.55
HIF3A-219ENST00000600879 RBM3P98179 157 aaKnown RBP5.36□□□□□ -1.55
HIF3A-219ENST00000600879 CD164Q04900 197 aa5.35□□□□□ -1.55
HIF3A-219ENST00000600879 PRO0461Q9UI25 63 aa5.35□□□□□ -1.55
HIF3A-219ENST00000600879 FCGBPQ9Y6R7 5405 aaPredicted RBP5.34□□□□□ -1.55
HIF3A-219ENST00000600879 DSCR8Q96T75 97 aa5.34□□□□□ -1.55
HIF3A-219ENST00000600879 TRBV7-4A0A0J9YYF1 115 aa5.33□□□□□ -1.56
HIF3A-219ENST00000600879 F8W1H4 67 aa5.33□□□□□ -1.56
HIF3A-219ENST00000600879 TEN1Q86WV5 123 aa5.33□□□□□ -1.56
HIF3A-219ENST00000600879 VPS25Q9BRG1 176 aa5.32□□□□□ -1.56
HIF3A-219ENST00000600879 LIMD2Q9BT23 127 aa5.32□□□□□ -1.56
HIF3A-219ENST00000600879 C14orf132Q9NPU4 83 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms