RNA–Protein interactions for RNA: ENST00000600646.5

FKRP-220, Transcript of fukutin related protein, humanhuman

TSL 3

Gene FKRP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-220ENST00000600646 F8WEM9 126 aa4.49□□□□□ -1.69
FKRP-220ENST00000600646 SMIM6P0DI80 62 aa4.49□□□□□ -1.69
FKRP-220ENST00000600646 LINC00575Q6W349 94 aa4.49□□□□□ -1.69
FKRP-220ENST00000600646 COX6CP09669 75 aa4.48□□□□□ -1.69
FKRP-220ENST00000600646 OCIAD2Q56VL3 154 aa4.48□□□□□ -1.69
FKRP-220ENST00000600646 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
FKRP-220ENST00000600646 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
FKRP-220ENST00000600646 IGLV5-48A0A075B6I7 105 aa4.47□□□□□ -1.69
FKRP-220ENST00000600646 PSMB2P49721 201 aa4.47□□□□□ -1.69
FKRP-220ENST00000600646 RPS29P62273 56 aaKnown RBP4.47□□□□□ -1.69
FKRP-220ENST00000600646 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.47□□□□□ -1.69
FKRP-220ENST00000600646 PPDPFLQ8WWR9 84 aa4.47□□□□□ -1.69
FKRP-220ENST00000600646 PRO1933Q9H354 126 aa4.47□□□□□ -1.69
FKRP-220ENST00000600646 TNXBP22105 4242 aa4.47□□□□□ -1.69
FKRP-220ENST00000600646 KRTAP4-8A0A0G2JLE6 195 aa4.46□□□□□ -1.7
FKRP-220ENST00000600646 A0A1B0GX51 115 aa4.46□□□□□ -1.7
FKRP-220ENST00000600646 TSTD3H0UI37 97 aa4.46□□□□□ -1.7
FKRP-220ENST00000600646 FXYD2P54710 66 aa4.46□□□□□ -1.7
FKRP-220ENST00000600646 Q6ZQY7 126 aa4.46□□□□□ -1.7
FKRP-220ENST00000600646 LIMD2Q9BT23 127 aa4.46□□□□□ -1.7
FKRP-220ENST00000600646 M0R143 59 aa4.45□□□□□ -1.7
FKRP-220ENST00000600646 SNHG12Q9BXW3 62 aa4.45□□□□□ -1.7
FKRP-220ENST00000600646 H3BQ85 93 aa4.44□□□□□ -1.7
FKRP-220ENST00000600646 DNAL4O96015 105 aa4.44□□□□□ -1.7
FKRP-220ENST00000600646 CD164Q04900 197 aa4.44□□□□□ -1.7
FKRP-220ENST00000600646 FP248Q71RG6 208 aaPredicted RBP4.44□□□□□ -1.7
FKRP-220ENST00000600646 HERC1Q15751 4861 aa4.44□□□□□ -1.7
FKRP-220ENST00000600646 SCGB1C2P0DMR2 95 aa4.43□□□□□ -1.7
FKRP-220ENST00000600646 Q6JHZ5 121 aa4.43□□□□□ -1.7
FKRP-220ENST00000600646 Q8N377 158 aa4.43□□□□□ -1.7
FKRP-220ENST00000600646 IGLV7-46A0A075B6I9 117 aa4.42□□□□□ -1.7
FKRP-220ENST00000600646 LINC01547P58512 204 aaPredicted RBP4.42□□□□□ -1.7
FKRP-220ENST00000600646 HRCT1Q6UXD1 115 aa4.42□□□□□ -1.7
FKRP-220ENST00000600646 SMIM29Q86T20 159 aa4.42□□□□□ -1.7
FKRP-220ENST00000600646 RETNLBQ9BQ08 111 aa4.42□□□□□ -1.7
FKRP-220ENST00000600646 TRIAP1O43715 76 aa4.41□□□□□ -1.7
FKRP-220ENST00000600646 KRTAP19-1Q8IUB9 90 aa4.41□□□□□ -1.7
FKRP-220ENST00000600646 K7ERJ3 54 aa4.4□□□□□ -1.71
FKRP-220ENST00000600646 TCL1BO95988 128 aa4.4□□□□□ -1.71
FKRP-220ENST00000600646 FABP2P12104 132 aa4.4□□□□□ -1.71
FKRP-220ENST00000600646 CDIP1Q9H305 208 aa4.4□□□□□ -1.71
FKRP-220ENST00000600646 LOC105371267A0A1B0GV96 52 aa4.39□□□□□ -1.71
FKRP-220ENST00000600646 TMEM256-PLSCR3K7ERE1 68 aa4.39□□□□□ -1.71
FKRP-220ENST00000600646 TPRXLQ17RH7 258 aa4.39□□□□□ -1.71
FKRP-220ENST00000600646 CLEC2BQ92478 149 aa4.39□□□□□ -1.71
FKRP-220ENST00000600646 ORMDL1Q9P0S3 153 aa4.39□□□□□ -1.71
FKRP-220ENST00000600646 IGLV8-61A0A075B6I0 122 aa4.38□□□□□ -1.71
FKRP-220ENST00000600646 NDUFV3P56181 108 aaKnown RBP4.38□□□□□ -1.71
FKRP-220ENST00000600646 LYRM7Q5U5X0 104 aa4.38□□□□□ -1.71
FKRP-220ENST00000600646 FAM218AQ96MZ4 157 aa4.38□□□□□ -1.71
FKRP-220ENST00000600646 H3BMG7 143 aa4.36□□□□□ -1.71
FKRP-220ENST00000600646 TRACP01848 142 aa4.36□□□□□ -1.71
FKRP-220ENST00000600646 Q5XG85 94 aa4.36□□□□□ -1.71
FKRP-220ENST00000600646 SS18L2Q9UHA2 77 aa4.36□□□□□ -1.71
FKRP-220ENST00000600646 BATFQ16520 125 aa4.35□□□□□ -1.71
FKRP-220ENST00000600646 IGFL1Q6UW32 110 aa4.35□□□□□ -1.71
FKRP-220ENST00000600646 TRBV7-7A0A0K0K1E9 115 aa4.34□□□□□ -1.71
FKRP-220ENST00000600646 LST1O00453 97 aa4.34□□□□□ -1.71
FKRP-220ENST00000600646 ATXN8Q156A1 80 aa4.34□□□□□ -1.71
FKRP-220ENST00000600646 TEN1Q86WV5 123 aa4.34□□□□□ -1.71
FKRP-220ENST00000600646 H3BUT2 72 aa4.33□□□□□ -1.72
FKRP-220ENST00000600646 UBE2V1Q13404 147 aa4.33□□□□□ -1.72
FKRP-220ENST00000600646 ANKRD29Q8N6D5 301 aa4.33□□□□□ -1.72
FKRP-220ENST00000600646 TRBV20-1A0A075B6N2 111 aa4.32□□□□□ -1.72
FKRP-220ENST00000600646 A0A0G2JQZ4 141 aa4.32□□□□□ -1.72
FKRP-220ENST00000600646 Q6Q795 121 aa4.32□□□□□ -1.72
FKRP-220ENST00000600646 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
FKRP-220ENST00000600646 HMCN2Q8NDA2 5059 aa4.31□□□□□ -1.72
FKRP-220ENST00000600646 BAALC-AS2P0C853 105 aa4.31□□□□□ -1.72
FKRP-220ENST00000600646 RBM3P98179 157 aaKnown RBP4.31□□□□□ -1.72
FKRP-220ENST00000600646 C21orf62-AS1Q17RA5 79 aa4.31□□□□□ -1.72
FKRP-220ENST00000600646 KRTAP13-3Q3SY46 172 aa4.31□□□□□ -1.72
FKRP-220ENST00000600646 ASB16-AS1Q495Z4 193 aa4.31□□□□□ -1.72
FKRP-220ENST00000600646 DSCR8Q96T75 97 aa4.31□□□□□ -1.72
FKRP-220ENST00000600646 C1orf195Q5TG92 126 aa4.3□□□□□ -1.72
FKRP-220ENST00000600646 TRBV7-4A0A0J9YYF1 115 aa4.29□□□□□ -1.72
FKRP-220ENST00000600646 A0A0U1RQV1 116 aa4.29□□□□□ -1.72
FKRP-220ENST00000600646 JMJD7-PLA2G4BH0Y9G9 81 aa4.29□□□□□ -1.72
FKRP-220ENST00000600646 SEC61BP60468 96 aaKnown RBP4.29□□□□□ -1.72
FKRP-220ENST00000600646 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
FKRP-220ENST00000600646 A0A087WSZ3 146 aa4.28□□□□□ -1.72
FKRP-220ENST00000600646 A0A1B0GV72 72 aa4.28□□□□□ -1.72
FKRP-220ENST00000600646 C9orf118A6NHY6 69 aa4.28□□□□□ -1.72
FKRP-220ENST00000600646 C9JAW5 83 aa4.28□□□□□ -1.72
FKRP-220ENST00000600646 NAA38Q9BRA0 125 aaKnown RBP4.28□□□□□ -1.72
FKRP-220ENST00000600646 CCKP06307 115 aa4.27□□□□□ -1.73
FKRP-220ENST00000600646 VPS25Q9BRG1 176 aa4.27□□□□□ -1.73
FKRP-220ENST00000600646 C9orf92A6NGG3 77 aa4.26□□□□□ -1.73
FKRP-220ENST00000600646 PDE6GP18545 87 aa4.26□□□□□ -1.73
FKRP-220ENST00000600646 A0A1W2PPM0 123 aa4.25□□□□□ -1.73
FKRP-220ENST00000600646 COL5A1-AS1Q5SY13 56 aa4.25□□□□□ -1.73
FKRP-220ENST00000600646 LPAP08519 4548 aa4.25□□□□□ -1.73
FKRP-220ENST00000600646 A0A1B0GW54 56 aa4.24□□□□□ -1.73
FKRP-220ENST00000600646 A0A1W2PNM2 257 aa4.24□□□□□ -1.73
FKRP-220ENST00000600646 TAX1BP3O14907 124 aa4.24□□□□□ -1.73
FKRP-220ENST00000600646 H3BT86 120 aa4.23□□□□□ -1.73
FKRP-220ENST00000600646 LRP2P98164 4655 aa4.23□□□□□ -1.73
FKRP-220ENST00000600646 SIGMAR1Q99720 223 aa4.23□□□□□ -1.73
FKRP-220ENST00000600646 SPCS1Q9Y6A9 102 aa4.22□□□□□ -1.73
FKRP-220ENST00000600646 LOC110117498A0A087WWA1 95 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms