RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 MP68P56378 58 aa12.26□□□□□ -0.45
ARHGEF1-218ENST00000599589 IGFL1Q6UW32 110 aa12.26□□□□□ -0.45
ARHGEF1-218ENST00000599589 ANK2Q01484 3957 aa12.25□□□□□ -0.45
ARHGEF1-218ENST00000599589 CASC10Q5T4H9 136 aa12.25□□□□□ -0.45
ARHGEF1-218ENST00000599589 LINC00208Q96KT6 92 aa12.24□□□□□ -0.45
ARHGEF1-218ENST00000599589 B9D2Q9BPU9 175 aa12.24□□□□□ -0.45
ARHGEF1-218ENST00000599589 RPL37AP61513 92 aaKnown RBP12.23□□□□□ -0.45
ARHGEF1-218ENST00000599589 DNAH3Q8TD57 4116 aa12.22□□□□□ -0.45
ARHGEF1-218ENST00000599589 A0A087WSZ3 146 aa12.22□□□□□ -0.45
ARHGEF1-218ENST00000599589 REG3GQ6UW15 175 aa12.22□□□□□ -0.45
ARHGEF1-218ENST00000599589 A8MU10 97 aa12.21□□□□□ -0.45
ARHGEF1-218ENST00000599589 TENM3Q9P273 2699 aa12.2□□□□□ -0.46
ARHGEF1-218ENST00000599589 COL6A5A8TX70 2615 aa12.19□□□□□ -0.46
ARHGEF1-218ENST00000599589 DNAH10OSP0CZ25 163 aa12.19□□□□□ -0.46
ARHGEF1-218ENST00000599589 Q5VV11 94 aa12.19□□□□□ -0.46
ARHGEF1-218ENST00000599589 K7EIL1 84 aa12.17□□□□□ -0.46
ARHGEF1-218ENST00000599589 BAHCC1Q9P281 2608 aa12.17□□□□□ -0.46
ARHGEF1-218ENST00000599589 KRTAP29-1A8MX34 341 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF1-218ENST00000599589 H0Y9P7 68 aa12.16□□□□□ -0.46
ARHGEF1-218ENST00000599589 NOTCH1P46531 2555 aa12.15□□□□□ -0.46
ARHGEF1-218ENST00000599589 PRLHP81277 87 aa12.14□□□□□ -0.47
ARHGEF1-218ENST00000599589 CASC2Q6XLA1 102 aa12.12□□□□□ -0.47
ARHGEF1-218ENST00000599589 Q8N9P0 234 aaPredicted RBP12.12□□□□□ -0.47
ARHGEF1-218ENST00000599589 SPANXA2-OT1Q8N9U9 137 aa12.11□□□□□ -0.47
ARHGEF1-218ENST00000599589 CHKB-CPT1BH3BT56 60 aa12.1□□□□□ -0.47
ARHGEF1-218ENST00000599589 IGLV8-61A0A075B6I0 122 aa12.09□□□□□ -0.47
ARHGEF1-218ENST00000599589 CNBPP62633 177 aaKnown RBP12.09□□□□□ -0.47
ARHGEF1-218ENST00000599589 LINC00588Q9Y4M8 146 aa12.08□□□□□ -0.48
ARHGEF1-218ENST00000599589 PRR15LQ9BU68 103 aa12.07□□□□□ -0.48
ARHGEF1-218ENST00000599589 H3BPC8 53 aa12.07□□□□□ -0.48
ARHGEF1-218ENST00000599589 LIMD2Q9BT23 127 aa12.06□□□□□ -0.48
ARHGEF1-218ENST00000599589 UBE2AP49459 152 aa12.06□□□□□ -0.48
ARHGEF1-218ENST00000599589 NBEAL1Q6ZS30 2694 aa12.05□□□□□ -0.48
ARHGEF1-218ENST00000599589 DNAH1Q9P2D7 4330 aa12.03□□□□□ -0.48
ARHGEF1-218ENST00000599589 C9orf163Q8N9P6 203 aa12.03□□□□□ -0.48
ARHGEF1-218ENST00000599589 IGKV2-24A0A0C4DH68 120 aa12.03□□□□□ -0.48
ARHGEF1-218ENST00000599589 C16orf90A8MZG2 172 aa12.03□□□□□ -0.48
ARHGEF1-218ENST00000599589 A8MWP4 228 aa12.01□□□□□ -0.49
ARHGEF1-218ENST00000599589 HUWE1Q7Z6Z7 4374 aaKnown RBP12□□□□□ -0.49
ARHGEF1-218ENST00000599589 A0A096LNI7 61 aa12□□□□□ -0.49
ARHGEF1-218ENST00000599589 LINC00472Q9H8W2 130 aa11.99□□□□□ -0.49
ARHGEF1-218ENST00000599589 COA5Q86WW8 74 aa11.97□□□□□ -0.49
ARHGEF1-218ENST00000599589 SPTSSBQ8NFR3 76 aa11.97□□□□□ -0.49
ARHGEF1-218ENST00000599589 SRRM2Q9UQ35 2752 aaKnown RBP11.97□□□□□ -0.49
ARHGEF1-218ENST00000599589 MGAM2Q2M2H8 2515 aa11.97□□□□□ -0.49
ARHGEF1-218ENST00000599589 MDFIQ99750 246 aa11.95□□□□□ -0.5
ARHGEF1-218ENST00000599589 H0Y9J4 135 aa11.95□□□□□ -0.5
ARHGEF1-218ENST00000599589 LCA10Q71F78 164 aa11.95□□□□□ -0.5
ARHGEF1-218ENST00000599589 CD164Q04900 197 aa11.93□□□□□ -0.5
ARHGEF1-218ENST00000599589 Q75L30 129 aa11.93□□□□□ -0.5
ARHGEF1-218ENST00000599589 A6NED7 52 aa11.92□□□□□ -0.5
ARHGEF1-218ENST00000599589 KRTAP11-1Q8IUC1 163 aa11.92□□□□□ -0.5
ARHGEF1-218ENST00000599589 MMP24-AS1A0A0U1RRL7 71 aa11.92□□□□□ -0.5
ARHGEF1-218ENST00000599589 IGLV7-46A0A075B6I9 117 aa11.91□□□□□ -0.5
ARHGEF1-218ENST00000599589 PCOTHQ58A44 107 aa11.9□□□□□ -0.5
ARHGEF1-218ENST00000599589 LOC101927531A0A1B0GV80 90 aa11.9□□□□□ -0.51
ARHGEF1-218ENST00000599589 PHF5AQ7RTV0 110 aaKnown RBP11.89□□□□□ -0.51
ARHGEF1-218ENST00000599589 KTN1-AS1Q86SY8 53 aa11.89□□□□□ -0.51
ARHGEF1-218ENST00000599589 SPRR1BP22528 89 aa11.88□□□□□ -0.51
ARHGEF1-218ENST00000599589 DNAH10Q8IVF4 4471 aa11.87□□□□□ -0.51
ARHGEF1-218ENST00000599589 ATP11AUNQ6ZP68 121 aa11.87□□□□□ -0.51
ARHGEF1-218ENST00000599589 TENM2Q9NT68 2774 aa11.85□□□□□ -0.51
ARHGEF1-218ENST00000599589 CHTF8P0CG12 524 aa11.85□□□□□ -0.51
ARHGEF1-218ENST00000599589 APLNQ9ULZ1 77 aa11.82□□□□□ -0.52
ARHGEF1-218ENST00000599589 SPAG11AQ6PDA7 123 aa11.82□□□□□ -0.52
ARHGEF1-218ENST00000599589 UBE2DNLQ8IWF7 75 aa11.8□□□□□ -0.52
ARHGEF1-218ENST00000599589 A6NN06 94 aa11.79□□□□□ -0.52
ARHGEF1-218ENST00000599589 CDC42SE1Q9NRR8 79 aa11.79□□□□□ -0.52
ARHGEF1-218ENST00000599589 DNAH9Q9NYC9 4486 aa11.79□□□□□ -0.52
ARHGEF1-218ENST00000599589 KRTAP1-5Q9BYS1 174 aa11.79□□□□□ -0.52
ARHGEF1-218ENST00000599589 RBM12B-AS1Q9P1G2 102 aa11.78□□□□□ -0.52
ARHGEF1-218ENST00000599589 STAB2Q8WWQ8 2551 aa11.78□□□□□ -0.52
ARHGEF1-218ENST00000599589 CSMD3Q7Z407 3707 aa11.77□□□□□ -0.52
ARHGEF1-218ENST00000599589 LINC01558Q9Y6Z2 57 aa11.77□□□□□ -0.53
ARHGEF1-218ENST00000599589 COL7A1Q02388 2944 aa11.76□□□□□ -0.53
ARHGEF1-218ENST00000599589 Q96NJ1 140 aa11.75□□□□□ -0.53
ARHGEF1-218ENST00000599589 TP53AIP1Q9HCN2 124 aa11.75□□□□□ -0.53
ARHGEF1-218ENST00000599589 ASB16-AS1Q495Z4 193 aa11.74□□□□□ -0.53
ARHGEF1-218ENST00000599589 PLAC8Q9NZF1 115 aa11.74□□□□□ -0.53
ARHGEF1-218ENST00000599589 NDUFS5O43920 106 aa11.73□□□□□ -0.53
ARHGEF1-218ENST00000599589 LYSTQ99698 3801 aa11.73□□□□□ -0.53
ARHGEF1-218ENST00000599589 MOBPQ13875 183 aa11.72□□□□□ -0.53
ARHGEF1-218ENST00000599589 Q6ZR54 194 aa11.72□□□□□ -0.53
ARHGEF1-218ENST00000599589 C8orf17Q9NRJ1 99 aa11.72□□□□□ -0.53
ARHGEF1-218ENST00000599589 IGLV9-49A0A0B4J1Y8 123 aa11.71□□□□□ -0.53
ARHGEF1-218ENST00000599589 HRES1P13985 223 aa11.7□□□□□ -0.54
ARHGEF1-218ENST00000599589 NUPR2A6NF83 97 aa11.69□□□□□ -0.54
ARHGEF1-218ENST00000599589 SPINK7P58062 85 aa11.69□□□□□ -0.54
ARHGEF1-218ENST00000599589 IGHV6-1A0A0B4J1U7 121 aa11.68□□□□□ -0.54
ARHGEF1-218ENST00000599589 C14orf177Q52M58 125 aa11.66□□□□□ -0.54
ARHGEF1-218ENST00000599589 DYNC2H1Q8NCM8 4307 aaKnown RBP11.65□□□□□ -0.54
ARHGEF1-218ENST00000599589 KRTAP13-1Q8IUC0 172 aa11.64□□□□□ -0.55
ARHGEF1-218ENST00000599589 A0A1B0GVX0 72 aa11.62□□□□□ -0.55
ARHGEF1-218ENST00000599589 NBDYA0A0U1RRE5 68 aa11.62□□□□□ -0.55
ARHGEF1-218ENST00000599589 C7orf65Q6ZTY9 151 aa11.61□□□□□ -0.55
ARHGEF1-218ENST00000599589 PANO1I0J062 215 aa11.61□□□□□ -0.55
ARHGEF1-218ENST00000599589 MRPL34Q9BQ48 92 aaKnown RBP11.59□□□□□ -0.55
ARHGEF1-218ENST00000599589 A0A087X002 238 aa11.58□□□□□ -0.56
ARHGEF1-218ENST00000599589 NOTCH2NLQ7Z3S9 236 aa11.58□□□□□ -0.56
ARHGEF1-218ENST00000599589 CDK2AP2O75956 126 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms