RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 Q8N377 158 aa10.52□□□□□ -0.73
PNKP-213ENST00000599543 SMIM6P0DI80 62 aa10.51□□□□□ -0.73
PNKP-213ENST00000599543 SLC25A20O43772 301 aa10.5□□□□□ -0.73
PNKP-213ENST00000599543 ASB16-AS1Q495Z4 193 aa10.5□□□□□ -0.73
PNKP-213ENST00000599543 PRO1854Q9UHT4 67 aa10.5□□□□□ -0.73
PNKP-213ENST00000599543 TEX49A0A1B0GTD5 131 aa10.49□□□□□ -0.73
PNKP-213ENST00000599543 hADV29S1A0JD25 119 aa10.48□□□□□ -0.73
PNKP-213ENST00000599543 LAMTOR3Q9UHA4 124 aa10.48□□□□□ -0.73
PNKP-213ENST00000599543 BVES-AS1Q5T3Y7 98 aa10.47□□□□□ -0.73
PNKP-213ENST00000599543 Q6ZQY7 126 aa10.47□□□□□ -0.73
PNKP-213ENST00000599543 SMIM29Q86T20 159 aa10.47□□□□□ -0.73
PNKP-213ENST00000599543 IGLV5-48A0A075B6I7 105 aa10.46□□□□□ -0.73
PNKP-213ENST00000599543 SEC61BP60468 96 aaKnown RBP10.46□□□□□ -0.73
PNKP-213ENST00000599543 FAM218AQ96MZ4 157 aa10.45□□□□□ -0.74
PNKP-213ENST00000599543 A0A0G2JQZ4 141 aa10.44□□□□□ -0.74
PNKP-213ENST00000599543 HRCT1Q6UXD1 115 aa10.44□□□□□ -0.74
PNKP-213ENST00000599543 TRIAP1O43715 76 aa10.43□□□□□ -0.74
PNKP-213ENST00000599543 CLEC2BQ92478 149 aa10.4□□□□□ -0.74
PNKP-213ENST00000599543 PSMB2P49721 201 aa10.39□□□□□ -0.75
PNKP-213ENST00000599543 H0YGX0 51 aa10.38□□□□□ -0.75
PNKP-213ENST00000599543 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.38□□□□□ -0.75
PNKP-213ENST00000599543 XP32Q5T750 250 aa10.37□□□□□ -0.75
PNKP-213ENST00000599543 KRTAP4-1Q9BYQ7 146 aa10.37□□□□□ -0.75
PNKP-213ENST00000599543 LIMD2Q9BT23 127 aa10.36□□□□□ -0.75
PNKP-213ENST00000599543 F8WEM9 126 aa10.33□□□□□ -0.76
PNKP-213ENST00000599543 TSTD3H0UI37 97 aa10.33□□□□□ -0.76
PNKP-213ENST00000599543 M0R143 59 aa10.31□□□□□ -0.76
PNKP-213ENST00000599543 NAA38Q9BRA0 125 aaKnown RBP10.31□□□□□ -0.76
PNKP-213ENST00000599543 SNHG12Q9BXW3 62 aa10.31□□□□□ -0.76
PNKP-213ENST00000599543 SNCGO76070 127 aa10.3□□□□□ -0.76
PNKP-213ENST00000599543 H3BUT2 72 aa10.29□□□□□ -0.76
PNKP-213ENST00000599543 BATFQ16520 125 aa10.29□□□□□ -0.76
PNKP-213ENST00000599543 COX6CP09669 75 aa10.27□□□□□ -0.77
PNKP-213ENST00000599543 OCIAD2Q56VL3 154 aa10.27□□□□□ -0.77
PNKP-213ENST00000599543 SCGB1C2P0DMR2 95 aa10.26□□□□□ -0.77
PNKP-213ENST00000599543 FABP2P12104 132 aa10.26□□□□□ -0.77
PNKP-213ENST00000599543 IGFL1Q6UW32 110 aa10.26□□□□□ -0.77
PNKP-213ENST00000599543 KRTAP9-6A0A140TA67 174 aa10.25□□□□□ -0.77
PNKP-213ENST00000599543 A0A1B0GX51 115 aa10.25□□□□□ -0.77
PNKP-213ENST00000599543 PPDPFLQ8WWR9 84 aa10.25□□□□□ -0.77
PNKP-213ENST00000599543 A0A1B0GV72 72 aa10.24□□□□□ -0.77
PNKP-213ENST00000599543 C9orf92A6NGG3 77 aa10.24□□□□□ -0.77
PNKP-213ENST00000599543 CD164Q04900 197 aa10.24□□□□□ -0.77
PNKP-213ENST00000599543 NDUFV3P56181 108 aaKnown RBP10.23□□□□□ -0.77
PNKP-213ENST00000599543 IGLV8-61A0A075B6I0 122 aa10.22□□□□□ -0.77
PNKP-213ENST00000599543 DNAL4O96015 105 aa10.22□□□□□ -0.77
PNKP-213ENST00000599543 PCOTHQ58A44 107 aa10.2□□□□□ -0.78
PNKP-213ENST00000599543 Q6JHZ5 121 aa10.2□□□□□ -0.78
PNKP-213ENST00000599543 ORMDL1Q9P0S3 153 aa10.19□□□□□ -0.78
PNKP-213ENST00000599543 LST1O00453 97 aa10.18□□□□□ -0.78
PNKP-213ENST00000599543 H3BMG7 143 aa10.17□□□□□ -0.78
PNKP-213ENST00000599543 Q5XG85 94 aa10.16□□□□□ -0.78
PNKP-213ENST00000599543 TRACP01848 142 aa10.15□□□□□ -0.78
PNKP-213ENST00000599543 TRBV7-7A0A0K0K1E9 115 aa10.14□□□□□ -0.79
PNKP-213ENST00000599543 TCL1BO95988 128 aa10.14□□□□□ -0.79
PNKP-213ENST00000599543 LCE2CQ5TA81 110 aa10.14□□□□□ -0.79
PNKP-213ENST00000599543 C1orf195Q5TG92 126 aa10.14□□□□□ -0.79
PNKP-213ENST00000599543 GHRHP01286 108 aa10.12□□□□□ -0.79
PNKP-213ENST00000599543 LCE2DQ5TA82 110 aaPredicted RBP10.1□□□□□ -0.79
PNKP-213ENST00000599543 TMEM256-PLSCR3K7ERE1 68 aa10.09□□□□□ -0.79
PNKP-213ENST00000599543 TAX1BP3O14907 124 aa10.09□□□□□ -0.79
PNKP-213ENST00000599543 ATXN8Q156A1 80 aa10.09□□□□□ -0.79
PNKP-213ENST00000599543 KRTAP19-2Q3LHN2 52 aa10.09□□□□□ -0.79
PNKP-213ENST00000599543 BAALC-AS2P0C853 105 aa10.07□□□□□ -0.8
PNKP-213ENST00000599543 FSIP2Q5CZC0 6907 aa10.06□□□□□ -0.8
PNKP-213ENST00000599543 A0A1W2PNM2 257 aa10.06□□□□□ -0.8
PNKP-213ENST00000599543 C9orf118A6NHY6 69 aa10.05□□□□□ -0.8
PNKP-213ENST00000599543 H3BQ85 93 aa10.05□□□□□ -0.8
PNKP-213ENST00000599543 MT1HP80294 61 aa10.05□□□□□ -0.8
PNKP-213ENST00000599543 UBE2V1Q13404 147 aa10.05□□□□□ -0.8
PNKP-213ENST00000599543 ANKRD29Q8N6D5 301 aa10.05□□□□□ -0.8
PNKP-213ENST00000599543 TEN1Q86WV5 123 aa10.04□□□□□ -0.8
PNKP-213ENST00000599543 A0A087WSZ3 146 aa10.03□□□□□ -0.8
PNKP-213ENST00000599543 PCP4L1A6NKN8 68 aa10.03□□□□□ -0.8
PNKP-213ENST00000599543 RPL37P61927 97 aaKnown RBP10.03□□□□□ -0.8
PNKP-213ENST00000599543 Q6Q795 121 aa10.02□□□□□ -0.81
PNKP-213ENST00000599543 LYRM7Q5U5X0 104 aa10.01□□□□□ -0.81
PNKP-213ENST00000599543 A0A1W2PPM0 123 aa10□□□□□ -0.81
PNKP-213ENST00000599543 C9JAW5 83 aa9.99□□□□□ -0.81
PNKP-213ENST00000599543 VPS25Q9BRG1 176 aa9.99□□□□□ -0.81
PNKP-213ENST00000599543 CCKP06307 115 aa9.98□□□□□ -0.81
PNKP-213ENST00000599543 MTURNQ8N3F0 131 aa9.98□□□□□ -0.81
PNKP-213ENST00000599543 TRBV20-1A0A075B6N2 111 aa9.97□□□□□ -0.81
PNKP-213ENST00000599543 RBM3P98179 157 aaKnown RBP9.97□□□□□ -0.81
PNKP-213ENST00000599543 TRBV7-4A0A0J9YYF1 115 aa9.95□□□□□ -0.82
PNKP-213ENST00000599543 SS18L2Q9UHA2 77 aa9.95□□□□□ -0.82
PNKP-213ENST00000599543 COX6B2Q6YFQ2 88 aa9.94□□□□□ -0.82
PNKP-213ENST00000599543 CRCT1Q9UGL9 99 aa9.94□□□□□ -0.82
PNKP-213ENST00000599543 COL5A1-AS1Q5SY13 56 aa9.93□□□□□ -0.82
PNKP-213ENST00000599543 DSCR8Q96T75 97 aa9.93□□□□□ -0.82
PNKP-213ENST00000599543 M0R2T5 61 aa9.92□□□□□ -0.82
PNKP-213ENST00000599543 Q96NJ1 140 aa9.92□□□□□ -0.82
PNKP-213ENST00000599543 LORP23490 312 aaPredicted RBP9.89□□□□□ -0.83
PNKP-213ENST00000599543 KRTAP10-6P60371 365 aaPredicted RBP9.89□□□□□ -0.83
PNKP-213ENST00000599543 DEFB116Q30KQ4 102 aa9.89□□□□□ -0.83
PNKP-213ENST00000599543 SPCS1Q9Y6A9 102 aa9.89□□□□□ -0.83
PNKP-213ENST00000599543 C14orf132Q9NPU4 83 aa9.88□□□□□ -0.83
PNKP-213ENST00000599543 SIGMAR1Q99720 223 aa9.87□□□□□ -0.83
PNKP-213ENST00000599543 FLGP20930 4061 aaPredicted RBP9.87□□□□□ -0.83
PNKP-213ENST00000599543 OBSCN-AS1Q96MR7 158 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 231.2 ms