RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 Q8NDZ9 215 aa7.3□□□□□ -1.24
SCN8A-208ENST00000599343 DMAC1Q96GE9 116 aa7.29□□□□□ -1.24
SCN8A-208ENST00000599343 FP248Q71RG6 208 aaPredicted RBP7.29□□□□□ -1.24
SCN8A-208ENST00000599343 FLNAP21333 2647 aaKnown RBP7.29□□□□□ -1.24
SCN8A-208ENST00000599343 SPINK7P58062 85 aa7.28□□□□□ -1.24
SCN8A-208ENST00000599343 Q5VV11 94 aa7.27□□□□□ -1.25
SCN8A-208ENST00000599343 Q5W150 140 aa7.27□□□□□ -1.25
SCN8A-208ENST00000599343 PRUNE2Q8WUY3 3088 aa7.26□□□□□ -1.25
SCN8A-208ENST00000599343 ITPR3Q14573 2671 aa7.24□□□□□ -1.25
SCN8A-208ENST00000599343 LAMA2P24043 3122 aaKnown RBP7.22□□□□□ -1.25
SCN8A-208ENST00000599343 CHD9Q3L8U1 2897 aa7.22□□□□□ -1.25
SCN8A-208ENST00000599343 PLAC8Q9NZF1 115 aa7.21□□□□□ -1.25
SCN8A-208ENST00000599343 A0A0A0MQY5 61 aa7.2□□□□□ -1.26
SCN8A-208ENST00000599343 CENPEQ02224 2701 aa7.2□□□□□ -1.26
SCN8A-208ENST00000599343 SPRR1AP35321 89 aa7.19□□□□□ -1.26
SCN8A-208ENST00000599343 LINC00472Q9H8W2 130 aa7.19□□□□□ -1.26
SCN8A-208ENST00000599343 UNC80Q8N2C7 3258 aa7.19□□□□□ -1.26
SCN8A-208ENST00000599343 R4GN34 69 aa7.19□□□□□ -1.26
SCN8A-208ENST00000599343 AKAP13Q12802 2813 aa7.18□□□□□ -1.26
SCN8A-208ENST00000599343 CFAP54Q96N23 3096 aa7.17□□□□□ -1.26
SCN8A-208ENST00000599343 STAB1Q9NY15 2570 aa7.17□□□□□ -1.26
SCN8A-208ENST00000599343 HELZ2Q9BYK8 2649 aaKnown RBP7.16□□□□□ -1.26
SCN8A-208ENST00000599343 XIRP2A4UGR9 3374 aa7.15□□□□□ -1.26
SCN8A-208ENST00000599343 ROMO1P60602 79 aa7.12□□□□□ -1.27
SCN8A-208ENST00000599343 OXTP01178 125 aa7.12□□□□□ -1.27
SCN8A-208ENST00000599343 CFAP46Q8IYW2 2715 aa7.11□□□□□ -1.27
SCN8A-208ENST00000599343 WDFY4Q6ZS81 3184 aa7.11□□□□□ -1.27
SCN8A-208ENST00000599343 SPRR1BP22528 89 aa7.11□□□□□ -1.27
SCN8A-208ENST00000599343 KRTAP26-1Q6PEX3 210 aa7.11□□□□□ -1.27
SCN8A-208ENST00000599343 RPL37P61927 97 aaKnown RBP7.11□□□□□ -1.27
SCN8A-208ENST00000599343 MGAQ8IWI9 3026 aa7.09□□□□□ -1.27
SCN8A-208ENST00000599343 CHD6Q8TD26 2715 aa7.08□□□□□ -1.28
SCN8A-208ENST00000599343 H1FX-AS1Q4G0G2 97 aa7.08□□□□□ -1.28
SCN8A-208ENST00000599343 M0QZ58 72 aa7.08□□□□□ -1.28
SCN8A-208ENST00000599343 KRTAP1-5Q9BYS1 174 aa7.08□□□□□ -1.28
SCN8A-208ENST00000599343 SPATA8Q6RVD6 105 aa7.06□□□□□ -1.28
SCN8A-208ENST00000599343 CDH23Q9H251 3354 aa7.05□□□□□ -1.28
SCN8A-208ENST00000599343 FLG2Q5D862 2391 aaPredicted RBP7.05□□□□□ -1.28
SCN8A-208ENST00000599343 TRIOO75962 3097 aa7.04□□□□□ -1.28
SCN8A-208ENST00000599343 NBEAL1Q6ZS30 2694 aa7.03□□□□□ -1.28
SCN8A-208ENST00000599343 Q5VSD8 79 aa7.03□□□□□ -1.28
SCN8A-208ENST00000599343 TRANK1O15050 2925 aa7.03□□□□□ -1.28
SCN8A-208ENST00000599343 SEC61BP60468 96 aaKnown RBP7.03□□□□□ -1.28
SCN8A-208ENST00000599343 KRTAP10-1P60331 282 aa7.01□□□□□ -1.29
SCN8A-208ENST00000599343 ADM2Q7Z4H4 148 aa7.01□□□□□ -1.29
SCN8A-208ENST00000599343 KRTAP10-2P60368 255 aa6.99□□□□□ -1.29
SCN8A-208ENST00000599343 Q6ZR54 194 aa6.99□□□□□ -1.29
SCN8A-208ENST00000599343 TEP1Q99973 2627 aaKnown RBP6.98□□□□□ -1.29
SCN8A-208ENST00000599343 TEX15Q9BXT5 2789 aa6.98□□□□□ -1.29
SCN8A-208ENST00000599343 NOTCH1P46531 2555 aa6.98□□□□□ -1.29
SCN8A-208ENST00000599343 MAP1AP78559 2803 aaPredicted RBP6.96□□□□□ -1.29
SCN8A-208ENST00000599343 UNC79Q9P2D8 2635 aa6.95□□□□□ -1.3
SCN8A-208ENST00000599343 VPS13AQ96RL7 3174 aa6.95□□□□□ -1.3
SCN8A-208ENST00000599343 PANO1I0J062 215 aa6.94□□□□□ -1.3
SCN8A-208ENST00000599343 GCN1Q92616 2671 aaKnown RBP6.93□□□□□ -1.3
SCN8A-208ENST00000599343 ZNF292O60281 2723 aa6.93□□□□□ -1.3
SCN8A-208ENST00000599343 PLAC4Q8WY50 150 aa6.93□□□□□ -1.3
SCN8A-208ENST00000599343 DSPP15924 2871 aaKnown RBP6.92□□□□□ -1.3
SCN8A-208ENST00000599343 SETXQ7Z333 2677 aaKnown RBP6.91□□□□□ -1.3
SCN8A-208ENST00000599343 KRTAP29-1A8MX34 341 aaPredicted RBP6.91□□□□□ -1.3
SCN8A-208ENST00000599343 CELSR3Q9NYQ7 3312 aa6.9□□□□□ -1.31
SCN8A-208ENST00000599343 A0A087X002 238 aa6.89□□□□□ -1.31
SCN8A-208ENST00000599343 NOTCH2NLQ7Z3S9 236 aa6.89□□□□□ -1.31
SCN8A-208ENST00000599343 COL6A5A8TX70 2615 aa6.89□□□□□ -1.31
SCN8A-208ENST00000599343 KRTAP4-16G5E9R7 235 aaPredicted RBP6.88□□□□□ -1.31
SCN8A-208ENST00000599343 SZT2Q5T011 3432 aa6.88□□□□□ -1.31
SCN8A-208ENST00000599343 A8MU10 97 aa6.85□□□□□ -1.31
SCN8A-208ENST00000599343 DMBT1Q9UGM3 2413 aaPredicted RBP6.85□□□□□ -1.31
SCN8A-208ENST00000599343 LCE6AA0A183 80 aa6.84□□□□□ -1.31
SCN8A-208ENST00000599343 ASB16-AS1Q495Z4 193 aa6.84□□□□□ -1.31
SCN8A-208ENST00000599343 KRTAP16-1A8MUX0 517 aa6.82□□□□□ -1.32
SCN8A-208ENST00000599343 KRTAP25-1Q3LHN0 102 aa6.8□□□□□ -1.32
SCN8A-208ENST00000599343 STAB2Q8WWQ8 2551 aa6.8□□□□□ -1.32
SCN8A-208ENST00000599343 VCANP13611 3396 aa6.8□□□□□ -1.32
SCN8A-208ENST00000599343 NBEAL2Q6ZNJ1 2754 aa6.8□□□□□ -1.32
SCN8A-208ENST00000599343 LAMA1P25391 3075 aa6.79□□□□□ -1.32
SCN8A-208ENST00000599343 C20orf166-AS1Q96NR2 134 aa6.78□□□□□ -1.32
SCN8A-208ENST00000599343 FREM2Q5SZK8 3169 aa6.78□□□□□ -1.32
SCN8A-208ENST00000599343 A6NN06 94 aa6.78□□□□□ -1.32
SCN8A-208ENST00000599343 KRTAP11-1Q8IUC1 163 aa6.77□□□□□ -1.33
SCN8A-208ENST00000599343 FRYQ5TBA9 3013 aa6.76□□□□□ -1.33
SCN8A-208ENST00000599343 DNAH14Q0VDD8 3507 aa6.76□□□□□ -1.33
SCN8A-208ENST00000599343 UBR5O95071 2799 aaPredicted RBP6.75□□□□□ -1.33
SCN8A-208ENST00000599343 A8MUU9 505 aa6.74□□□□□ -1.33
SCN8A-208ENST00000599343 COL6A3P12111 3177 aa6.71□□□□□ -1.34
SCN8A-208ENST00000599343 NDUFAF8A1L188 74 aa6.7□□□□□ -1.34
SCN8A-208ENST00000599343 IGSF10Q6WRI0 2623 aa6.69□□□□□ -1.34
SCN8A-208ENST00000599343 FRYLO94915 3013 aa6.67□□□□□ -1.34
SCN8A-208ENST00000599343 BOD1L1Q8NFC6 3051 aa6.67□□□□□ -1.34
SCN8A-208ENST00000599343 NSD1Q96L73 2696 aaPredicted RBP6.66□□□□□ -1.34
SCN8A-208ENST00000599343 BAHCC1Q9P281 2608 aa6.66□□□□□ -1.34
SCN8A-208ENST00000599343 KRTAP7-1Q8IUC3 87 aa6.65□□□□□ -1.34
SCN8A-208ENST00000599343 ATMQ13315 3056 aa6.63□□□□□ -1.35
SCN8A-208ENST00000599343 KRTAP13-2Q52LG2 175 aa6.62□□□□□ -1.35
SCN8A-208ENST00000599343 TACC2O95359 2948 aa6.62□□□□□ -1.35
SCN8A-208ENST00000599343 RPS29P62273 56 aaKnown RBP6.61□□□□□ -1.35
SCN8A-208ENST00000599343 REV3LO60673 3130 aa6.6□□□□□ -1.35
SCN8A-208ENST00000599343 Q6ZRN7 208 aaPredicted RBP6.6□□□□□ -1.35
SCN8A-208ENST00000599343 COL12A1Q99715 3063 aa6.59□□□□□ -1.35
SCN8A-208ENST00000599343 C10orf95Q9H7T3 257 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms