RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 MUC17Q685J3 4493 aa7.94□□□□□ -1.14
LIG1-218ENST00000599322 LINC01547P58512 204 aaPredicted RBP7.93□□□□□ -1.14
LIG1-218ENST00000599322 Q6ZQY7 126 aa7.93□□□□□ -1.14
LIG1-218ENST00000599322 SMIM29Q86T20 159 aa7.93□□□□□ -1.14
LIG1-218ENST00000599322 KRTAP9-2Q9BYQ4 174 aa7.93□□□□□ -1.14
LIG1-218ENST00000599322 SEC61BP60468 96 aaKnown RBP7.92□□□□□ -1.14
LIG1-218ENST00000599322 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.92□□□□□ -1.14
LIG1-218ENST00000599322 SNHG12Q9BXW3 62 aa7.92□□□□□ -1.14
LIG1-218ENST00000599322 TSTD3H0UI37 97 aa7.91□□□□□ -1.14
LIG1-218ENST00000599322 H0YGX0 51 aa7.91□□□□□ -1.14
LIG1-218ENST00000599322 TCL1BO95988 128 aa7.91□□□□□ -1.14
LIG1-218ENST00000599322 GHRHP01286 108 aa7.91□□□□□ -1.14
LIG1-218ENST00000599322 LCE2AQ5TA79 106 aaPredicted RBP7.91□□□□□ -1.14
LIG1-218ENST00000599322 PPDPFLQ8WWR9 84 aa7.91□□□□□ -1.14
LIG1-218ENST00000599322 A0A0B4J2C4 111 aa7.9□□□□□ -1.14
LIG1-218ENST00000599322 CFC1BP0CG36 223 aa7.9□□□□□ -1.14
LIG1-218ENST00000599322 CFC1P0CG37 223 aa7.9□□□□□ -1.14
LIG1-218ENST00000599322 Q6JHZ5 121 aa7.9□□□□□ -1.14
LIG1-218ENST00000599322 OCIAD2Q56VL3 154 aa7.89□□□□□ -1.15
LIG1-218ENST00000599322 CEND1Q8N111 149 aa7.89□□□□□ -1.15
LIG1-218ENST00000599322 PCP4L1A6NKN8 68 aa7.88□□□□□ -1.15
LIG1-218ENST00000599322 Q5XG85 94 aa7.87□□□□□ -1.15
LIG1-218ENST00000599322 C2orf91Q6ZV80 131 aa7.86□□□□□ -1.15
LIG1-218ENST00000599322 PRO1854Q9UHT4 67 aa7.86□□□□□ -1.15
LIG1-218ENST00000599322 ASB16-AS1Q495Z4 193 aa7.85□□□□□ -1.15
LIG1-218ENST00000599322 CLEC2BQ92478 149 aa7.84□□□□□ -1.15
LIG1-218ENST00000599322 A0A0G2JQZ4 141 aa7.82□□□□□ -1.16
LIG1-218ENST00000599322 A0A1B0GX51 115 aa7.82□□□□□ -1.16
LIG1-218ENST00000599322 HSD52Q0P140 79 aa7.82□□□□□ -1.16
LIG1-218ENST00000599322 IGLV8-61A0A075B6I0 122 aa7.81□□□□□ -1.16
LIG1-218ENST00000599322 C9orf92A6NGG3 77 aa7.81□□□□□ -1.16
LIG1-218ENST00000599322 XP32Q5T750 250 aa7.81□□□□□ -1.16
LIG1-218ENST00000599322 COX6CP09669 75 aa7.8□□□□□ -1.16
LIG1-218ENST00000599322 PSMB2P49721 201 aa7.8□□□□□ -1.16
LIG1-218ENST00000599322 C1orf195Q5TG92 126 aa7.8□□□□□ -1.16
LIG1-218ENST00000599322 UQCR10Q9UDW1 63 aa7.8□□□□□ -1.16
LIG1-218ENST00000599322 FXYD2P54710 66 aa7.79□□□□□ -1.16
LIG1-218ENST00000599322 IGFL1Q6UW32 110 aa7.79□□□□□ -1.16
LIG1-218ENST00000599322 TRBV7-7A0A0K0K1E9 115 aa7.78□□□□□ -1.16
LIG1-218ENST00000599322 DNAL4O96015 105 aa7.78□□□□□ -1.16
LIG1-218ENST00000599322 FABP2P12104 132 aa7.78□□□□□ -1.16
LIG1-218ENST00000599322 H3BQ85 93 aa7.77□□□□□ -1.17
LIG1-218ENST00000599322 NDUFV3P56181 108 aaKnown RBP7.77□□□□□ -1.17
LIG1-218ENST00000599322 SS18L2Q9UHA2 77 aa7.76□□□□□ -1.17
LIG1-218ENST00000599322 H3BUT2 72 aa7.75□□□□□ -1.17
LIG1-218ENST00000599322 LST1O00453 97 aa7.74□□□□□ -1.17
LIG1-218ENST00000599322 FAM218AQ96MZ4 157 aa7.74□□□□□ -1.17
LIG1-218ENST00000599322 KRTAP9-6A0A140TA67 174 aa7.73□□□□□ -1.17
LIG1-218ENST00000599322 H3BMG7 143 aa7.73□□□□□ -1.17
LIG1-218ENST00000599322 TRIAP1O43715 76 aa7.73□□□□□ -1.17
LIG1-218ENST00000599322 TEN1Q86WV5 123 aa7.72□□□□□ -1.17
LIG1-218ENST00000599322 ORMDL1Q9P0S3 153 aa7.72□□□□□ -1.17
LIG1-218ENST00000599322 M0R143 59 aa7.71□□□□□ -1.18
LIG1-218ENST00000599322 SCGB1C2P0DMR2 95 aa7.71□□□□□ -1.18
LIG1-218ENST00000599322 TMEM256-PLSCR3K7ERE1 68 aa7.69□□□□□ -1.18
LIG1-218ENST00000599322 K7ERJ3 54 aa7.69□□□□□ -1.18
LIG1-218ENST00000599322 PCOTHQ58A44 107 aa7.69□□□□□ -1.18
LIG1-218ENST00000599322 Q6Q795 121 aa7.69□□□□□ -1.18
LIG1-218ENST00000599322 ANKRD29Q8N6D5 301 aa7.67□□□□□ -1.18
LIG1-218ENST00000599322 RPL37P61927 97 aaKnown RBP7.65□□□□□ -1.18
LIG1-218ENST00000599322 A0A087WSZ3 146 aa7.64□□□□□ -1.19
LIG1-218ENST00000599322 KRTAP4-1Q9BYQ7 146 aa7.64□□□□□ -1.19
LIG1-218ENST00000599322 TRACP01848 142 aa7.62□□□□□ -1.19
LIG1-218ENST00000599322 UBE2V1Q13404 147 aa7.61□□□□□ -1.19
LIG1-218ENST00000599322 COL5A1-AS1Q5SY13 56 aa7.61□□□□□ -1.19
LIG1-218ENST00000599322 ATP11AUNQ6ZP68 121 aa7.61□□□□□ -1.19
LIG1-218ENST00000599322 OBSCN-AS1Q96MR7 158 aa7.61□□□□□ -1.19
LIG1-218ENST00000599322 TRBV7-4A0A0J9YYF1 115 aa7.59□□□□□ -1.19
LIG1-218ENST00000599322 A0A1B0GV72 72 aa7.59□□□□□ -1.19
LIG1-218ENST00000599322 Q96NJ1 140 aa7.58□□□□□ -1.2
LIG1-218ENST00000599322 DSCR8Q96T75 97 aa7.57□□□□□ -1.2
LIG1-218ENST00000599322 SIGMAR1Q99720 223 aa7.57□□□□□ -1.2
LIG1-218ENST00000599322 A0A1W2PNM2 257 aa7.56□□□□□ -1.2
LIG1-218ENST00000599322 CCKP06307 115 aa7.56□□□□□ -1.2
LIG1-218ENST00000599322 RBM3P98179 157 aaKnown RBP7.56□□□□□ -1.2
LIG1-218ENST00000599322 C21orf62-AS1Q17RA5 79 aa7.55□□□□□ -1.2
LIG1-218ENST00000599322 Q75L30 129 aa7.55□□□□□ -1.2
LIG1-218ENST00000599322 VPS25Q9BRG1 176 aa7.55□□□□□ -1.2
LIG1-218ENST00000599322 BAALC-AS2P0C853 105 aa7.54□□□□□ -1.2
LIG1-218ENST00000599322 ATXN8Q156A1 80 aa7.54□□□□□ -1.2
LIG1-218ENST00000599322 LCE2DQ5TA82 110 aaPredicted RBP7.54□□□□□ -1.2
LIG1-218ENST00000599322 LYRM7Q5U5X0 104 aa7.54□□□□□ -1.2
LIG1-218ENST00000599322 A0A1B0GV90 55 aa7.53□□□□□ -1.2
LIG1-218ENST00000599322 IGKV4-1P06312 121 aa7.53□□□□□ -1.2
LIG1-218ENST00000599322 COX6B2Q6YFQ2 88 aa7.52□□□□□ -1.21
LIG1-218ENST00000599322 C9JAW5 83 aa7.51□□□□□ -1.21
LIG1-218ENST00000599322 BATFQ16520 125 aa7.51□□□□□ -1.21
LIG1-218ENST00000599322 LINC00313P59037 77 aa7.49□□□□□ -1.21
LIG1-218ENST00000599322 FSIP2Q5CZC0 6907 aa7.48□□□□□ -1.21
LIG1-218ENST00000599322 JMJD7-PLA2G4BH0Y9G9 81 aa7.48□□□□□ -1.21
LIG1-218ENST00000599322 LCE2CQ5TA81 110 aa7.48□□□□□ -1.21
LIG1-218ENST00000599322 DSCR10P59022 87 aa7.47□□□□□ -1.21
LIG1-218ENST00000599322 TAX1BP3O14907 124 aa7.46□□□□□ -1.22
LIG1-218ENST00000599322 C20orf166-AS1Q96NR2 134 aa7.46□□□□□ -1.22
LIG1-218ENST00000599322 NAA38Q9BRA0 125 aaKnown RBP7.46□□□□□ -1.22
LIG1-218ENST00000599322 TRBV20-1A0A075B6N2 111 aa7.45□□□□□ -1.22
LIG1-218ENST00000599322 PDE6GP18545 87 aa7.45□□□□□ -1.22
LIG1-218ENST00000599322 KRTAP19-2Q3LHN2 52 aa7.45□□□□□ -1.22
LIG1-218ENST00000599322 A8MUU9 505 aa7.44□□□□□ -1.22
LIG1-218ENST00000599322 J3KT08 172 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms