RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 IFITM1P13164 125 aa10.17□□□□□ -0.78
IRF3-222ENST00000599144 CD164Q04900 197 aa10.17□□□□□ -0.78
IRF3-222ENST00000599144 SMIM29Q86T20 159 aa10.17□□□□□ -0.78
IRF3-222ENST00000599144 CBY1Q9Y3M2 126 aa10.16□□□□□ -0.78
IRF3-222ENST00000599144 TEX49A0A1B0GTD5 131 aa10.13□□□□□ -0.79
IRF3-222ENST00000599144 HIGD1BQ9P298 99 aa10.12□□□□□ -0.79
IRF3-222ENST00000599144 Q5XG85 94 aa10.11□□□□□ -0.79
IRF3-222ENST00000599144 MUSTN1Q8IVN3 82 aa10.11□□□□□ -0.79
IRF3-222ENST00000599144 HIST1H4GQ99525 98 aa10.11□□□□□ -0.79
IRF3-222ENST00000599144 LINC00518Q8N0U6 118 aa10.1□□□□□ -0.79
IRF3-222ENST00000599144 UQCR10Q9UDW1 63 aa10.1□□□□□ -0.79
IRF3-222ENST00000599144 Q6Q795 121 aa10.08□□□□□ -0.8
IRF3-222ENST00000599144 C2orf91Q6ZV80 131 aa10.07□□□□□ -0.8
IRF3-222ENST00000599144 C12orf57Q99622 126 aa10.06□□□□□ -0.8
IRF3-222ENST00000599144 IGLV5-48A0A075B6I7 105 aa10.04□□□□□ -0.8
IRF3-222ENST00000599144 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.03□□□□□ -0.8
IRF3-222ENST00000599144 A4D1N5 150 aa10.02□□□□□ -0.81
IRF3-222ENST00000599144 KRTAP9-7A8MTY7 169 aa10.02□□□□□ -0.81
IRF3-222ENST00000599144 SSPOA2VEC9 5147 aa10.01□□□□□ -0.81
IRF3-222ENST00000599144 TRAV13-2A0A0B4J235 113 aa10□□□□□ -0.81
IRF3-222ENST00000599144 A0A1B0GWB2 263 aa10□□□□□ -0.81
IRF3-222ENST00000599144 A6NDN8 102 aa10□□□□□ -0.81
IRF3-222ENST00000599144 TSTD3H0UI37 97 aa10□□□□□ -0.81
IRF3-222ENST00000599144 TRBV7-6A0A0J9YX20 115 aa9.99□□□□□ -0.81
IRF3-222ENST00000599144 HSD52Q0P140 79 aa9.99□□□□□ -0.81
IRF3-222ENST00000599144 CEND1Q8N111 149 aa9.99□□□□□ -0.81
IRF3-222ENST00000599144 TMEM238LA0A1B0GVL6 79 aa9.98□□□□□ -0.81
IRF3-222ENST00000599144 A6NJY4 79 aa9.98□□□□□ -0.81
IRF3-222ENST00000599144 TCL1BO95988 128 aa9.98□□□□□ -0.81
IRF3-222ENST00000599144 USH2AO75445 5202 aa9.98□□□□□ -0.81
IRF3-222ENST00000599144 OBSCN-AS1Q96MR7 158 aa9.95□□□□□ -0.82
IRF3-222ENST00000599144 RAB37Q96AX2 223 aa9.93□□□□□ -0.82
IRF3-222ENST00000599144 CFC1P0CG37 223 aa9.92□□□□□ -0.82
IRF3-222ENST00000599144 FXYD2P54710 66 aa9.92□□□□□ -0.82
IRF3-222ENST00000599144 SMIM11BQ8TCY0 68 aa9.92□□□□□ -0.82
IRF3-222ENST00000599144 A0A0B4J2C4 111 aa9.91□□□□□ -0.82
IRF3-222ENST00000599144 ATP11AUNQ6ZP68 121 aa9.91□□□□□ -0.82
IRF3-222ENST00000599144 KRTAP9-8Q9BYQ0 159 aa9.91□□□□□ -0.82
IRF3-222ENST00000599144 F8WEM9 126 aa9.88□□□□□ -0.83
IRF3-222ENST00000599144 M0R143 59 aa9.88□□□□□ -0.83
IRF3-222ENST00000599144 BVES-AS1Q5T3Y7 98 aa9.87□□□□□ -0.83
IRF3-222ENST00000599144 IGFL1Q6UW32 110 aa9.87□□□□□ -0.83
IRF3-222ENST00000599144 Q75L30 129 aa9.87□□□□□ -0.83
IRF3-222ENST00000599144 NHP2Q9NX24 153 aaKnown RBP9.87□□□□□ -0.83
IRF3-222ENST00000599144 PRO1854Q9UHT4 67 aa9.87□□□□□ -0.83
IRF3-222ENST00000599144 TRBV7-7A0A0K0K1E9 115 aa9.86□□□□□ -0.83
IRF3-222ENST00000599144 VAMP3Q15836 100 aa9.86□□□□□ -0.83
IRF3-222ENST00000599144 Q6ZQY7 126 aa9.83□□□□□ -0.84
IRF3-222ENST00000599144 CLEC2BQ92478 149 aa9.82□□□□□ -0.84
IRF3-222ENST00000599144 Q96NJ1 140 aa9.82□□□□□ -0.84
IRF3-222ENST00000599144 LINC00575Q6W349 94 aa9.81□□□□□ -0.84
IRF3-222ENST00000599144 K7ERJ3 54 aa9.8□□□□□ -0.84
IRF3-222ENST00000599144 OCIAD2Q56VL3 154 aa9.79□□□□□ -0.84
IRF3-222ENST00000599144 Q6JHZ5 121 aa9.79□□□□□ -0.84
IRF3-222ENST00000599144 hADV29S1A0JD25 119 aa9.77□□□□□ -0.85
IRF3-222ENST00000599144 H3BUT2 72 aa9.77□□□□□ -0.85
IRF3-222ENST00000599144 FCGBPQ9Y6R7 5405 aaPredicted RBP9.76□□□□□ -0.85
IRF3-222ENST00000599144 H0YGX0 51 aa9.76□□□□□ -0.85
IRF3-222ENST00000599144 SNCGO76070 127 aa9.75□□□□□ -0.85
IRF3-222ENST00000599144 MT2AP02795 61 aa9.75□□□□□ -0.85
IRF3-222ENST00000599144 PSMB2P49721 201 aa9.75□□□□□ -0.85
IRF3-222ENST00000599144 BATFQ16520 125 aa9.75□□□□□ -0.85
IRF3-222ENST00000599144 LST1O00453 97 aa9.74□□□□□ -0.85
IRF3-222ENST00000599144 COX6CP09669 75 aa9.74□□□□□ -0.85
IRF3-222ENST00000599144 TRIAP1O43715 76 aa9.71□□□□□ -0.86
IRF3-222ENST00000599144 KRTAP19-1Q8IUB9 90 aa9.71□□□□□ -0.86
IRF3-222ENST00000599144 C20orf166-AS1Q96NR2 134 aa9.71□□□□□ -0.86
IRF3-222ENST00000599144 LCE2BO14633 110 aa9.7□□□□□ -0.86
IRF3-222ENST00000599144 A8MUU9 505 aa9.69□□□□□ -0.86
IRF3-222ENST00000599144 MT1FP04733 61 aa9.69□□□□□ -0.86
IRF3-222ENST00000599144 TRBV20-1A0A075B6N2 111 aa9.68□□□□□ -0.86
IRF3-222ENST00000599144 PCP4L1A6NKN8 68 aa9.68□□□□□ -0.86
IRF3-222ENST00000599144 SCGB1C2P0DMR2 95 aa9.68□□□□□ -0.86
IRF3-222ENST00000599144 SNHG12Q9BXW3 62 aa9.67□□□□□ -0.86
IRF3-222ENST00000599144 A0A1B0GX51 115 aa9.66□□□□□ -0.86
IRF3-222ENST00000599144 DSCR10P59022 87 aa9.66□□□□□ -0.86
IRF3-222ENST00000599144 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.66□□□□□ -0.86
IRF3-222ENST00000599144 KRTAP16-1A8MUX0 517 aa9.65□□□□□ -0.86
IRF3-222ENST00000599144 FAM218AQ96MZ4 157 aa9.63□□□□□ -0.87
IRF3-222ENST00000599144 FAM236DA0A1B0GTK5 79 aa9.62□□□□□ -0.87
IRF3-222ENST00000599144 FAM236CP0DP71 79 aa9.62□□□□□ -0.87
IRF3-222ENST00000599144 GHRHP01286 108 aa9.61□□□□□ -0.87
IRF3-222ENST00000599144 LYRM7Q5U5X0 104 aa9.61□□□□□ -0.87
IRF3-222ENST00000599144 DNAL4O96015 105 aa9.6□□□□□ -0.87
IRF3-222ENST00000599144 COL5A1-AS1Q5SY13 56 aa9.6□□□□□ -0.87
IRF3-222ENST00000599144 KRTAP9-3Q9BYQ3 159 aa9.6□□□□□ -0.87
IRF3-222ENST00000599144 A0A087WSZ3 146 aa9.59□□□□□ -0.87
IRF3-222ENST00000599144 PPDPFLQ8WWR9 84 aa9.59□□□□□ -0.87
IRF3-222ENST00000599144 NAA38Q9BRA0 125 aaKnown RBP9.59□□□□□ -0.87
IRF3-222ENST00000599144 C9orf118A6NHY6 69 aa9.58□□□□□ -0.88
IRF3-222ENST00000599144 TAX1BP3O14907 124 aa9.58□□□□□ -0.88
IRF3-222ENST00000599144 KRTAP10-10P60014 251 aa9.58□□□□□ -0.88
IRF3-222ENST00000599144 SS18L2Q9UHA2 77 aa9.58□□□□□ -0.88
IRF3-222ENST00000599144 H3BQ85 93 aa9.56□□□□□ -0.88
IRF3-222ENST00000599144 TRACP01848 142 aa9.56□□□□□ -0.88
IRF3-222ENST00000599144 ATXN8Q156A1 80 aa9.55□□□□□ -0.88
IRF3-222ENST00000599144 SYNE2Q8WXH0 6885 aaKnown RBP9.54□□□□□ -0.88
IRF3-222ENST00000599144 TEN1Q86WV5 123 aa9.54□□□□□ -0.88
IRF3-222ENST00000599144 ORMDL1Q9P0S3 153 aa9.54□□□□□ -0.88
IRF3-222ENST00000599144 HRES1P13985 223 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms