RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 SLC25A20O43772 301 aa9.02□□□□□ -0.97
USHBP1-206ENST00000596436 SPINK1P00995 79 aa9.02□□□□□ -0.97
USHBP1-206ENST00000596436 BVES-AS1Q5T3Y7 98 aa9.02□□□□□ -0.97
USHBP1-206ENST00000596436 PRO1854Q9UHT4 67 aa9.02□□□□□ -0.97
USHBP1-206ENST00000596436 Q6ZQY7 126 aa9.01□□□□□ -0.97
USHBP1-206ENST00000596436 PRO1933Q9H354 126 aa9.01□□□□□ -0.97
USHBP1-206ENST00000596436 K7ERJ3 54 aa9□□□□□ -0.97
USHBP1-206ENST00000596436 SMIM6P0DI80 62 aa9□□□□□ -0.97
USHBP1-206ENST00000596436 LOC105371267A0A1B0GV96 52 aa8.98□□□□□ -0.97
USHBP1-206ENST00000596436 FAM218AQ96MZ4 157 aa8.98□□□□□ -0.97
USHBP1-206ENST00000596436 RPS29P62273 56 aaKnown RBP8.97□□□□□ -0.97
USHBP1-206ENST00000596436 FP248Q71RG6 208 aaPredicted RBP8.97□□□□□ -0.97
USHBP1-206ENST00000596436 A0A0G2JQZ4 141 aa8.96□□□□□ -0.98
USHBP1-206ENST00000596436 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.96□□□□□ -0.98
USHBP1-206ENST00000596436 TRIAP1O43715 76 aa8.95□□□□□ -0.98
USHBP1-206ENST00000596436 KRTAP13-3Q3SY46 172 aa8.95□□□□□ -0.98
USHBP1-206ENST00000596436 HRCT1Q6UXD1 115 aa8.95□□□□□ -0.98
USHBP1-206ENST00000596436 H0YGX0 51 aa8.94□□□□□ -0.98
USHBP1-206ENST00000596436 ASB16-AS1Q495Z4 193 aa8.94□□□□□ -0.98
USHBP1-206ENST00000596436 LCE2DQ5TA82 110 aaPredicted RBP8.93□□□□□ -0.98
USHBP1-206ENST00000596436 CLEC2BQ92478 149 aa8.9□□□□□ -0.98
USHBP1-206ENST00000596436 KRTAP4-1Q9BYQ7 146 aa8.9□□□□□ -0.98
USHBP1-206ENST00000596436 CD164Q04900 197 aa8.89□□□□□ -0.99
USHBP1-206ENST00000596436 PPDPFLQ8WWR9 84 aa8.89□□□□□ -0.99
USHBP1-206ENST00000596436 F8WEM9 126 aa8.88□□□□□ -0.99
USHBP1-206ENST00000596436 PSMB2P49721 201 aa8.88□□□□□ -0.99
USHBP1-206ENST00000596436 FSIP2Q5CZC0 6907 aa8.87□□□□□ -0.99
USHBP1-206ENST00000596436 IGLV8-61A0A075B6I0 122 aa8.87□□□□□ -0.99
USHBP1-206ENST00000596436 A0A1B0GX51 115 aa8.86□□□□□ -0.99
USHBP1-206ENST00000596436 LIMD2Q9BT23 127 aa8.86□□□□□ -0.99
USHBP1-206ENST00000596436 OCIAD2Q56VL3 154 aa8.85□□□□□ -0.99
USHBP1-206ENST00000596436 SNCGO76070 127 aa8.84□□□□□ -0.99
USHBP1-206ENST00000596436 IGFL1Q6UW32 110 aa8.84□□□□□ -0.99
USHBP1-206ENST00000596436 SNHG12Q9BXW3 62 aa8.84□□□□□ -0.99
USHBP1-206ENST00000596436 H3BUT2 72 aa8.83□□□□□ -1
USHBP1-206ENST00000596436 M0R143 59 aa8.83□□□□□ -1
USHBP1-206ENST00000596436 SEC61BP60468 96 aaKnown RBP8.83□□□□□ -1
USHBP1-206ENST00000596436 TSTD3H0UI37 97 aa8.82□□□□□ -1
USHBP1-206ENST00000596436 Q6JHZ5 121 aa8.82□□□□□ -1
USHBP1-206ENST00000596436 Q5XG85 94 aa8.81□□□□□ -1
USHBP1-206ENST00000596436 COX6CP09669 75 aa8.8□□□□□ -1
USHBP1-206ENST00000596436 NDUFV3P56181 108 aaKnown RBP8.8□□□□□ -1
USHBP1-206ENST00000596436 CRCT1Q9UGL9 99 aa8.79□□□□□ -1
USHBP1-206ENST00000596436 DNAL4O96015 105 aa8.78□□□□□ -1
USHBP1-206ENST00000596436 FABP2P12104 132 aa8.78□□□□□ -1
USHBP1-206ENST00000596436 XP32Q5T750 250 aa8.78□□□□□ -1
USHBP1-206ENST00000596436 LCE2CQ5TA81 110 aa8.78□□□□□ -1
USHBP1-206ENST00000596436 NAA38Q9BRA0 125 aaKnown RBP8.77□□□□□ -1.01
USHBP1-206ENST00000596436 TRBV7-7A0A0K0K1E9 115 aa8.76□□□□□ -1.01
USHBP1-206ENST00000596436 LST1O00453 97 aa8.76□□□□□ -1.01
USHBP1-206ENST00000596436 C1orf195Q5TG92 126 aa8.76□□□□□ -1.01
USHBP1-206ENST00000596436 ORMDL1Q9P0S3 153 aa8.76□□□□□ -1.01
USHBP1-206ENST00000596436 SCGB1C2P0DMR2 95 aa8.75□□□□□ -1.01
USHBP1-206ENST00000596436 H3BMG7 143 aa8.74□□□□□ -1.01
USHBP1-206ENST00000596436 GHRHP01286 108 aa8.74□□□□□ -1.01
USHBP1-206ENST00000596436 KRTAP19-2Q3LHN2 52 aa8.74□□□□□ -1.01
USHBP1-206ENST00000596436 TRACP01848 142 aa8.73□□□□□ -1.01
USHBP1-206ENST00000596436 BATFQ16520 125 aa8.73□□□□□ -1.01
USHBP1-206ENST00000596436 A0A1B0GV72 72 aa8.71□□□□□ -1.02
USHBP1-206ENST00000596436 TCL1BO95988 128 aa8.71□□□□□ -1.02
USHBP1-206ENST00000596436 Q6Q795 121 aa8.7□□□□□ -1.02
USHBP1-206ENST00000596436 H3BQ85 93 aa8.69□□□□□ -1.02
USHBP1-206ENST00000596436 TMEM256-PLSCR3K7ERE1 68 aa8.69□□□□□ -1.02
USHBP1-206ENST00000596436 A0A1W2PNM2 257 aa8.67□□□□□ -1.02
USHBP1-206ENST00000596436 C9orf92A6NGG3 77 aa8.67□□□□□ -1.02
USHBP1-206ENST00000596436 UBE2V1Q13404 147 aa8.67□□□□□ -1.02
USHBP1-206ENST00000596436 TEN1Q86WV5 123 aa8.67□□□□□ -1.02
USHBP1-206ENST00000596436 MT1HP80294 61 aa8.65□□□□□ -1.02
USHBP1-206ENST00000596436 ATXN8Q156A1 80 aa8.64□□□□□ -1.03
USHBP1-206ENST00000596436 A0A087WSZ3 146 aa8.63□□□□□ -1.03
USHBP1-206ENST00000596436 BAALC-AS2P0C853 105 aa8.63□□□□□ -1.03
USHBP1-206ENST00000596436 ANKRD29Q8N6D5 301 aa8.63□□□□□ -1.03
USHBP1-206ENST00000596436 TAX1BP3O14907 124 aa8.62□□□□□ -1.03
USHBP1-206ENST00000596436 C9orf118A6NHY6 69 aa8.6□□□□□ -1.03
USHBP1-206ENST00000596436 SS18L2Q9UHA2 77 aa8.6□□□□□ -1.03
USHBP1-206ENST00000596436 TRBV7-4A0A0J9YYF1 115 aa8.59□□□□□ -1.03
USHBP1-206ENST00000596436 LORP23490 312 aaPredicted RBP8.58□□□□□ -1.04
USHBP1-206ENST00000596436 LYRM7Q5U5X0 104 aa8.58□□□□□ -1.04
USHBP1-206ENST00000596436 Q96NJ1 140 aa8.58□□□□□ -1.04
USHBP1-206ENST00000596436 CCKP06307 115 aa8.57□□□□□ -1.04
USHBP1-206ENST00000596436 TRBV20-1A0A075B6N2 111 aa8.56□□□□□ -1.04
USHBP1-206ENST00000596436 A0A1W2PPM0 123 aa8.56□□□□□ -1.04
USHBP1-206ENST00000596436 RBM3P98179 157 aaKnown RBP8.56□□□□□ -1.04
USHBP1-206ENST00000596436 PCOTHQ58A44 107 aa8.56□□□□□ -1.04
USHBP1-206ENST00000596436 C9JAW5 83 aa8.54□□□□□ -1.04
USHBP1-206ENST00000596436 KRTAP10-6P60371 365 aaPredicted RBP8.53□□□□□ -1.04
USHBP1-206ENST00000596436 DSCR8Q96T75 97 aa8.53□□□□□ -1.04
USHBP1-206ENST00000596436 VPS25Q9BRG1 176 aa8.52□□□□□ -1.05
USHBP1-206ENST00000596436 FLGP20930 4061 aaPredicted RBP8.51□□□□□ -1.05
USHBP1-206ENST00000596436 JMJD7-PLA2G4BH0Y9G9 81 aa8.49□□□□□ -1.05
USHBP1-206ENST00000596436 RPL37P61927 97 aaKnown RBP8.49□□□□□ -1.05
USHBP1-206ENST00000596436 MTURNQ8N3F0 131 aa8.49□□□□□ -1.05
USHBP1-206ENST00000596436 OBSCN-AS1Q96MR7 158 aa8.49□□□□□ -1.05
USHBP1-206ENST00000596436 Q6ZQT0 140 aa8.48□□□□□ -1.05
USHBP1-206ENST00000596436 COL5A1-AS1Q5SY13 56 aa8.47□□□□□ -1.05
USHBP1-206ENST00000596436 SIGMAR1Q99720 223 aa8.47□□□□□ -1.05
USHBP1-206ENST00000596436 LINC00472Q9H8W2 130 aa8.47□□□□□ -1.05
USHBP1-206ENST00000596436 LOC110117498A0A087WWA1 95 aa8.46□□□□□ -1.06
USHBP1-206ENST00000596436 DEFB116Q30KQ4 102 aa8.46□□□□□ -1.06
USHBP1-206ENST00000596436 C14orf132Q9NPU4 83 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms