RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 UBE2AP49459 152 aa10.95□□□□□ -0.66
ARHGEF1-213ENST00000595897 A0A096LNI7 61 aa10.95□□□□□ -0.66
ARHGEF1-213ENST00000595897 LINC00208Q96KT6 92 aa10.95□□□□□ -0.66
ARHGEF1-213ENST00000595897 Q1T7F1 81 aa10.94□□□□□ -0.66
ARHGEF1-213ENST00000595897 PSPHP1O15172 72 aa10.94□□□□□ -0.66
ARHGEF1-213ENST00000595897 C1orf195Q5TG92 126 aa10.94□□□□□ -0.66
ARHGEF1-213ENST00000595897 CYP4F30PQ9H0H9 118 aa10.93□□□□□ -0.66
ARHGEF1-213ENST00000595897 FBN1P35555 2871 aaKnown RBP10.92□□□□□ -0.66
ARHGEF1-213ENST00000595897 KMT2BQ9UMN6 2715 aaPredicted RBP10.92□□□□□ -0.66
ARHGEF1-213ENST00000595897 C16orf90A8MZG2 172 aa10.91□□□□□ -0.66
ARHGEF1-213ENST00000595897 IGLV8-61A0A075B6I0 122 aa10.9□□□□□ -0.66
ARHGEF1-213ENST00000595897 TRAV22A0A0B4J277 110 aa10.89□□□□□ -0.67
ARHGEF1-213ENST00000595897 CASC2Q6XLA1 102 aa10.89□□□□□ -0.67
ARHGEF1-213ENST00000595897 COL6A5A8TX70 2615 aa10.89□□□□□ -0.67
ARHGEF1-213ENST00000595897 NBEAL1Q6ZS30 2694 aa10.89□□□□□ -0.67
ARHGEF1-213ENST00000595897 KRTAP24-1Q3LI83 254 aa10.87□□□□□ -0.67
ARHGEF1-213ENST00000595897 H0Y9P7 68 aa10.86□□□□□ -0.67
ARHGEF1-213ENST00000595897 B9D2Q9BPU9 175 aa10.86□□□□□ -0.67
ARHGEF1-213ENST00000595897 SRRM2Q9UQ35 2752 aaKnown RBP10.86□□□□□ -0.67
ARHGEF1-213ENST00000595897 KRTAP29-1A8MX34 341 aaPredicted RBP10.85□□□□□ -0.67
ARHGEF1-213ENST00000595897 PRR15Q8IV56 129 aa10.84□□□□□ -0.67
ARHGEF1-213ENST00000595897 PHF5AQ7RTV0 110 aaKnown RBP10.84□□□□□ -0.67
ARHGEF1-213ENST00000595897 CHTF8P0CG12 524 aa10.83□□□□□ -0.68
ARHGEF1-213ENST00000595897 CNBPP62633 177 aaKnown RBP10.82□□□□□ -0.68
ARHGEF1-213ENST00000595897 KRTAP1-5Q9BYS1 174 aa10.82□□□□□ -0.68
ARHGEF1-213ENST00000595897 A8MWP4 228 aa10.81□□□□□ -0.68
ARHGEF1-213ENST00000595897 A8MUN3 132 aa10.8□□□□□ -0.68
ARHGEF1-213ENST00000595897 H0Y9J4 135 aa10.8□□□□□ -0.68
ARHGEF1-213ENST00000595897 KRTAP11-1Q8IUC1 163 aa10.8□□□□□ -0.68
ARHGEF1-213ENST00000595897 V9GYY9 64 aa10.8□□□□□ -0.68
ARHGEF1-213ENST00000595897 DNAH1Q9P2D7 4330 aa10.79□□□□□ -0.68
ARHGEF1-213ENST00000595897 H3BPC8 53 aa10.78□□□□□ -0.68
ARHGEF1-213ENST00000595897 LINC00472Q9H8W2 130 aa10.77□□□□□ -0.68
ARHGEF1-213ENST00000595897 SPANXA2-OT1Q8N9U9 137 aa10.77□□□□□ -0.69
ARHGEF1-213ENST00000595897 UBE2DNLQ8IWF7 75 aa10.76□□□□□ -0.69
ARHGEF1-213ENST00000595897 SPRR1BP22528 89 aa10.75□□□□□ -0.69
ARHGEF1-213ENST00000595897 DNAH10Q8IVF4 4471 aa10.73□□□□□ -0.69
ARHGEF1-213ENST00000595897 STAB2Q8WWQ8 2551 aa10.72□□□□□ -0.69
ARHGEF1-213ENST00000595897 C14orf177Q52M58 125 aa10.72□□□□□ -0.69
ARHGEF1-213ENST00000595897 SEC61GP60059 68 aa10.72□□□□□ -0.69
ARHGEF1-213ENST00000595897 CMYA5Q8N3K9 4069 aa10.7□□□□□ -0.7
ARHGEF1-213ENST00000595897 K7EIL1 84 aa10.7□□□□□ -0.7
ARHGEF1-213ENST00000595897 CSMD3Q7Z407 3707 aa10.7□□□□□ -0.7
ARHGEF1-213ENST00000595897 Q5VV11 94 aa10.68□□□□□ -0.7
ARHGEF1-213ENST00000595897 MMP24-AS1A0A0U1RRL7 71 aa10.68□□□□□ -0.7
ARHGEF1-213ENST00000595897 MGAM2Q2M2H8 2515 aa10.68□□□□□ -0.7
ARHGEF1-213ENST00000595897 CHKB-CPT1BH3BT56 60 aa10.68□□□□□ -0.7
ARHGEF1-213ENST00000595897 Q8N9P0 234 aaPredicted RBP10.68□□□□□ -0.7
ARHGEF1-213ENST00000595897 C9orf163Q8N9P6 203 aa10.68□□□□□ -0.7
ARHGEF1-213ENST00000595897 LIMD2Q9BT23 127 aa10.67□□□□□ -0.7
ARHGEF1-213ENST00000595897 PMAIP1Q13794 54 aa10.67□□□□□ -0.7
ARHGEF1-213ENST00000595897 IGLV9-49A0A0B4J1Y8 123 aa10.66□□□□□ -0.7
ARHGEF1-213ENST00000595897 PRR15LQ9BU68 103 aa10.66□□□□□ -0.7
ARHGEF1-213ENST00000595897 LYSTQ99698 3801 aa10.66□□□□□ -0.7
ARHGEF1-213ENST00000595897 HUWE1Q7Z6Z7 4374 aaKnown RBP10.65□□□□□ -0.71
ARHGEF1-213ENST00000595897 PCOTHQ58A44 107 aa10.65□□□□□ -0.71
ARHGEF1-213ENST00000595897 DNAH3Q8TD57 4116 aa10.64□□□□□ -0.71
ARHGEF1-213ENST00000595897 A8MU10 97 aa10.63□□□□□ -0.71
ARHGEF1-213ENST00000595897 COA5Q86WW8 74 aa10.62□□□□□ -0.71
ARHGEF1-213ENST00000595897 TENM2Q9NT68 2774 aa10.62□□□□□ -0.71
ARHGEF1-213ENST00000595897 IGLV7-46A0A075B6I9 117 aa10.6□□□□□ -0.71
ARHGEF1-213ENST00000595897 PANO1I0J062 215 aa10.59□□□□□ -0.71
ARHGEF1-213ENST00000595897 NDUFS5O43920 106 aa10.59□□□□□ -0.71
ARHGEF1-213ENST00000595897 COL7A1Q02388 2944 aa10.59□□□□□ -0.71
ARHGEF1-213ENST00000595897 TP53AIP1Q9HCN2 124 aa10.58□□□□□ -0.72
ARHGEF1-213ENST00000595897 APLNQ9ULZ1 77 aa10.57□□□□□ -0.72
ARHGEF1-213ENST00000595897 DNAH9Q9NYC9 4486 aa10.56□□□□□ -0.72
ARHGEF1-213ENST00000595897 IGHV6-1A0A0B4J1U7 121 aa10.56□□□□□ -0.72
ARHGEF1-213ENST00000595897 MOBPQ13875 183 aa10.56□□□□□ -0.72
ARHGEF1-213ENST00000595897 KRTAP13-1Q8IUC0 172 aa10.56□□□□□ -0.72
ARHGEF1-213ENST00000595897 Q96NJ1 140 aa10.55□□□□□ -0.72
ARHGEF1-213ENST00000595897 C8orf17Q9NRJ1 99 aa10.55□□□□□ -0.72
ARHGEF1-213ENST00000595897 A6NED7 52 aa10.54□□□□□ -0.72
ARHGEF1-213ENST00000595897 CD164Q04900 197 aa10.54□□□□□ -0.72
ARHGEF1-213ENST00000595897 CDK2AP2O75956 126 aa10.53□□□□□ -0.72
ARHGEF1-213ENST00000595897 SPTSSBQ8NFR3 76 aa10.53□□□□□ -0.72
ARHGEF1-213ENST00000595897 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.5□□□□□ -0.73
ARHGEF1-213ENST00000595897 NBDYA0A0U1RRE5 68 aa10.5□□□□□ -0.73
ARHGEF1-213ENST00000595897 ASB16-AS1Q495Z4 193 aa10.5□□□□□ -0.73
ARHGEF1-213ENST00000595897 Q75L30 129 aa10.5□□□□□ -0.73
ARHGEF1-213ENST00000595897 SPAG11AQ6PDA7 123 aa10.49□□□□□ -0.73
ARHGEF1-213ENST00000595897 A0A1B0GVX0 72 aa10.48□□□□□ -0.73
ARHGEF1-213ENST00000595897 LOC101927531A0A1B0GV80 90 aa10.47□□□□□ -0.73
ARHGEF1-213ENST00000595897 Q6ZR54 194 aa10.47□□□□□ -0.73
ARHGEF1-213ENST00000595897 LCA10Q71F78 164 aa10.45□□□□□ -0.74
ARHGEF1-213ENST00000595897 SPACA4Q8TDM5 124 aa10.45□□□□□ -0.74
ARHGEF1-213ENST00000595897 MRPL34Q9BQ48 92 aaKnown RBP10.45□□□□□ -0.74
ARHGEF1-213ENST00000595897 ANAPC11Q9NYG5 84 aa10.45□□□□□ -0.74
ARHGEF1-213ENST00000595897 ZNF706Q9Y5V0 76 aaPredicted RBP10.44□□□□□ -0.74
ARHGEF1-213ENST00000595897 MDFIQ99750 246 aa10.44□□□□□ -0.74
ARHGEF1-213ENST00000595897 LINC00483Q53H64 154 aa10.44□□□□□ -0.74
ARHGEF1-213ENST00000595897 Q6ZRN7 208 aaPredicted RBP10.42□□□□□ -0.74
ARHGEF1-213ENST00000595897 WWC2-AS2Q96NR7 200 aa10.42□□□□□ -0.74
ARHGEF1-213ENST00000595897 A0A087X002 238 aa10.41□□□□□ -0.74
ARHGEF1-213ENST00000595897 ATP11AUNQ6ZP68 121 aa10.41□□□□□ -0.74
ARHGEF1-213ENST00000595897 NOTCH2NLQ7Z3S9 236 aa10.41□□□□□ -0.74
ARHGEF1-213ENST00000595897 HRES1P13985 223 aa10.39□□□□□ -0.75
ARHGEF1-213ENST00000595897 PSORS1C2Q9UIG4 136 aa10.39□□□□□ -0.75
ARHGEF1-213ENST00000595897 LINC01558Q9Y6Z2 57 aa10.39□□□□□ -0.75
ARHGEF1-213ENST00000595897 SPINK6Q6UWN8 80 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms