RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 CEND1Q8N111 149 aa6.13□□□□□ -1.43
SHKBP1-206ENST00000595523 PRO1933Q9H354 126 aa6.13□□□□□ -1.43
SHKBP1-206ENST00000595523 M0R143 59 aa6.12□□□□□ -1.43
SHKBP1-206ENST00000595523 FXYD2P54710 66 aa6.12□□□□□ -1.43
SHKBP1-206ENST00000595523 CD164Q04900 197 aa6.11□□□□□ -1.43
SHKBP1-206ENST00000595523 BVES-AS1Q5T3Y7 98 aa6.11□□□□□ -1.43
SHKBP1-206ENST00000595523 RAB37Q96AX2 223 aa6.11□□□□□ -1.43
SHKBP1-206ENST00000595523 LIMD2Q9BT23 127 aa6.1□□□□□ -1.43
SHKBP1-206ENST00000595523 FAT4Q6V0I7 4981 aa6.09□□□□□ -1.43
SHKBP1-206ENST00000595523 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.09□□□□□ -1.43
SHKBP1-206ENST00000595523 FAM218AQ96MZ4 157 aa6.09□□□□□ -1.43
SHKBP1-206ENST00000595523 Q5XG85 94 aa6.08□□□□□ -1.44
SHKBP1-206ENST00000595523 IGLV8-61A0A075B6I0 122 aa6.07□□□□□ -1.44
SHKBP1-206ENST00000595523 PRO1854Q9UHT4 67 aa6.07□□□□□ -1.44
SHKBP1-206ENST00000595523 TMEM238LA0A1B0GVL6 79 aa6.06□□□□□ -1.44
SHKBP1-206ENST00000595523 A6NJY4 79 aa6.06□□□□□ -1.44
SHKBP1-206ENST00000595523 HSD52Q0P140 79 aa6.06□□□□□ -1.44
SHKBP1-206ENST00000595523 F8WEM9 126 aa6.05□□□□□ -1.44
SHKBP1-206ENST00000595523 H0YGX0 51 aa6.05□□□□□ -1.44
SHKBP1-206ENST00000595523 IGFL1Q6UW32 110 aa6.05□□□□□ -1.44
SHKBP1-206ENST00000595523 PPDPFLQ8WWR9 84 aa6.05□□□□□ -1.44
SHKBP1-206ENST00000595523 UQCR10Q9UDW1 63 aa6.05□□□□□ -1.44
SHKBP1-206ENST00000595523 A0A1B0GV90 55 aa6.04□□□□□ -1.44
SHKBP1-206ENST00000595523 K7ERJ3 54 aa6.04□□□□□ -1.44
SHKBP1-206ENST00000595523 TRIAP1O43715 76 aa6.04□□□□□ -1.44
SHKBP1-206ENST00000595523 OCIAD2Q56VL3 154 aa6.04□□□□□ -1.44
SHKBP1-206ENST00000595523 COL5A1-AS1Q5SY13 56 aa6.04□□□□□ -1.44
SHKBP1-206ENST00000595523 XP32Q5T750 250 aa6.04□□□□□ -1.44
SHKBP1-206ENST00000595523 C1orf195Q5TG92 126 aa6.04□□□□□ -1.44
SHKBP1-206ENST00000595523 SNHG12Q9BXW3 62 aa6.04□□□□□ -1.44
SHKBP1-206ENST00000595523 ASB16-AS1Q495Z4 193 aa6.03□□□□□ -1.44
SHKBP1-206ENST00000595523 Q6JHZ5 121 aa6.03□□□□□ -1.44
SHKBP1-206ENST00000595523 CLEC2BQ92478 149 aa6.03□□□□□ -1.44
SHKBP1-206ENST00000595523 H3BUT2 72 aa6.02□□□□□ -1.45
SHKBP1-206ENST00000595523 KRTAP4-1Q9BYQ7 146 aa6.02□□□□□ -1.45
SHKBP1-206ENST00000595523 TRBV7-7A0A0K0K1E9 115 aa6□□□□□ -1.45
SHKBP1-206ENST00000595523 A0A1B0GX51 115 aa6□□□□□ -1.45
SHKBP1-206ENST00000595523 C9orf92A6NGG3 77 aa6□□□□□ -1.45
SHKBP1-206ENST00000595523 TCL1BO95988 128 aa5.98□□□□□ -1.45
SHKBP1-206ENST00000595523 NDUFV3P56181 108 aaKnown RBP5.98□□□□□ -1.45
SHKBP1-206ENST00000595523 SEC61BP60468 96 aaKnown RBP5.98□□□□□ -1.45
SHKBP1-206ENST00000595523 SNCGO76070 127 aa5.97□□□□□ -1.45
SHKBP1-206ENST00000595523 A0A0U1RQV1 116 aa5.96□□□□□ -1.46
SHKBP1-206ENST00000595523 PSMB2P49721 201 aa5.95□□□□□ -1.46
SHKBP1-206ENST00000595523 LCE2AQ5TA79 106 aaPredicted RBP5.95□□□□□ -1.46
SHKBP1-206ENST00000595523 Q6Q795 121 aa5.95□□□□□ -1.46
SHKBP1-206ENST00000595523 H3BMG7 143 aa5.94□□□□□ -1.46
SHKBP1-206ENST00000595523 FABP2P12104 132 aa5.94□□□□□ -1.46
SHKBP1-206ENST00000595523 GHRHP01286 108 aa5.92□□□□□ -1.46
SHKBP1-206ENST00000595523 COX6CP09669 75 aa5.92□□□□□ -1.46
SHKBP1-206ENST00000595523 TEN1Q86WV5 123 aa5.92□□□□□ -1.46
SHKBP1-206ENST00000595523 ORMDL1Q9P0S3 153 aa5.92□□□□□ -1.46
SHKBP1-206ENST00000595523 A0A1W2PNM2 257 aa5.91□□□□□ -1.46
SHKBP1-206ENST00000595523 DNAL4O96015 105 aa5.91□□□□□ -1.46
SHKBP1-206ENST00000595523 UBE2V1Q13404 147 aa5.91□□□□□ -1.46
SHKBP1-206ENST00000595523 PCOTHQ58A44 107 aa5.91□□□□□ -1.46
SHKBP1-206ENST00000595523 LST1O00453 97 aa5.9□□□□□ -1.46
SHKBP1-206ENST00000595523 A0A087WSZ3 146 aa5.89□□□□□ -1.47
SHKBP1-206ENST00000595523 A0A1B0GV72 72 aa5.89□□□□□ -1.47
SHKBP1-206ENST00000595523 TRACP01848 142 aa5.89□□□□□ -1.47
SHKBP1-206ENST00000595523 RPL37P61927 97 aaKnown RBP5.88□□□□□ -1.47
SHKBP1-206ENST00000595523 Q96NJ1 140 aa5.88□□□□□ -1.47
SHKBP1-206ENST00000595523 SS18L2Q9UHA2 77 aa5.88□□□□□ -1.47
SHKBP1-206ENST00000595523 H3BQ85 93 aa5.87□□□□□ -1.47
SHKBP1-206ENST00000595523 TMEM256-PLSCR3K7ERE1 68 aa5.87□□□□□ -1.47
SHKBP1-206ENST00000595523 SCGB1C2P0DMR2 95 aa5.87□□□□□ -1.47
SHKBP1-206ENST00000595523 NAA38Q9BRA0 125 aaKnown RBP5.87□□□□□ -1.47
SHKBP1-206ENST00000595523 KRTAP19-2Q3LHN2 52 aa5.86□□□□□ -1.47
SHKBP1-206ENST00000595523 ANKRD29Q8N6D5 301 aa5.86□□□□□ -1.47
SHKBP1-206ENST00000595523 BATFQ16520 125 aa5.85□□□□□ -1.47
SHKBP1-206ENST00000595523 LCE2CQ5TA81 110 aa5.85□□□□□ -1.47
SHKBP1-206ENST00000595523 OBSCN-AS1Q96MR7 158 aa5.85□□□□□ -1.47
SHKBP1-206ENST00000595523 TRBV7-4A0A0J9YYF1 115 aa5.84□□□□□ -1.47
SHKBP1-206ENST00000595523 CCKP06307 115 aa5.82□□□□□ -1.48
SHKBP1-206ENST00000595523 GTF2H5Q6ZYL4 71 aa5.82□□□□□ -1.48
SHKBP1-206ENST00000595523 TAX1BP3O14907 124 aa5.81□□□□□ -1.48
SHKBP1-206ENST00000595523 BAALC-AS2P0C853 105 aa5.81□□□□□ -1.48
SHKBP1-206ENST00000595523 Q75L30 129 aa5.8□□□□□ -1.48
SHKBP1-206ENST00000595523 C9orf118A6NHY6 69 aa5.79□□□□□ -1.48
SHKBP1-206ENST00000595523 K7ERU9 68 aa5.79□□□□□ -1.48
SHKBP1-206ENST00000595523 RBM3P98179 157 aaKnown RBP5.79□□□□□ -1.48
SHKBP1-206ENST00000595523 ATXN8Q156A1 80 aa5.79□□□□□ -1.48
SHKBP1-206ENST00000595523 LINC00472Q9H8W2 130 aa5.79□□□□□ -1.48
SHKBP1-206ENST00000595523 SIGMAR1Q99720 223 aa5.78□□□□□ -1.48
SHKBP1-206ENST00000595523 DSCR10P59022 87 aa5.77□□□□□ -1.49
SHKBP1-206ENST00000595523 DEFB116Q30KQ4 102 aa5.77□□□□□ -1.49
SHKBP1-206ENST00000595523 C20orf166-AS1Q96NR2 134 aa5.77□□□□□ -1.49
SHKBP1-206ENST00000595523 A8MUU9 505 aa5.76□□□□□ -1.49
SHKBP1-206ENST00000595523 IGKV4-1P06312 121 aa5.76□□□□□ -1.49
SHKBP1-206ENST00000595523 DSCR8Q96T75 97 aa5.76□□□□□ -1.49
SHKBP1-206ENST00000595523 VPS25Q9BRG1 176 aa5.76□□□□□ -1.49
SHKBP1-206ENST00000595523 FLGP20930 4061 aaPredicted RBP5.75□□□□□ -1.49
SHKBP1-206ENST00000595523 KRTAP16-1A8MUX0 517 aa5.75□□□□□ -1.49
SHKBP1-206ENST00000595523 NOTCH2NLQ7Z3S9 236 aa5.75□□□□□ -1.49
SHKBP1-206ENST00000595523 C9JAW5 83 aa5.74□□□□□ -1.49
SHKBP1-206ENST00000595523 K7EP34 96 aa5.74□□□□□ -1.49
SHKBP1-206ENST00000595523 MT1HP80294 61 aa5.74□□□□□ -1.49
SHKBP1-206ENST00000595523 ATP11AUNQ6ZP68 121 aa5.74□□□□□ -1.49
SHKBP1-206ENST00000595523 LYRM7Q5U5X0 104 aa5.73□□□□□ -1.49
SHKBP1-206ENST00000595523 Q6ZQT0 140 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms