RNA–Protein interactions for RNA: ENST00000595514.1

NOTCH3-203, Transcript of notch 3, humanhuman

TSL 3

Gene NOTCH3, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-203ENST00000595514 FP248Q71RG6 208 aaPredicted RBP5.79□□□□□ -1.48
NOTCH3-203ENST00000595514 PRO1854Q9UHT4 67 aa5.79□□□□□ -1.48
NOTCH3-203ENST00000595514 USH2AO75445 5202 aa5.79□□□□□ -1.48
NOTCH3-203ENST00000595514 IGLV5-48A0A075B6I7 105 aa5.78□□□□□ -1.48
NOTCH3-203ENST00000595514 LINC00575Q6W349 94 aa5.78□□□□□ -1.48
NOTCH3-203ENST00000595514 NHP2Q9NX24 153 aaKnown RBP5.78□□□□□ -1.48
NOTCH3-203ENST00000595514 MACF1Q9UPN3 7388 aaKnown RBP5.77□□□□□ -1.49
NOTCH3-203ENST00000595514 K7ERJ3 54 aa5.77□□□□□ -1.49
NOTCH3-203ENST00000595514 TSTD3H0UI37 97 aa5.76□□□□□ -1.49
NOTCH3-203ENST00000595514 H7C2G1 150 aa5.76□□□□□ -1.49
NOTCH3-203ENST00000595514 M0R2T5 61 aa5.76□□□□□ -1.49
NOTCH3-203ENST00000595514 VAMP3Q15836 100 aa5.76□□□□□ -1.49
NOTCH3-203ENST00000595514 KRTAP19-2Q3LHN2 52 aa5.76□□□□□ -1.49
NOTCH3-203ENST00000595514 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
NOTCH3-203ENST00000595514 SMIM29Q86T20 159 aa5.75□□□□□ -1.49
NOTCH3-203ENST00000595514 hADV29S1A0JD25 119 aa5.74□□□□□ -1.49
NOTCH3-203ENST00000595514 TRIAP1O43715 76 aa5.74□□□□□ -1.49
NOTCH3-203ENST00000595514 Q8N377 158 aa5.74□□□□□ -1.49
NOTCH3-203ENST00000595514 FAM218AQ96MZ4 157 aa5.74□□□□□ -1.49
NOTCH3-203ENST00000595514 TEX49A0A1B0GTD5 131 aa5.73□□□□□ -1.49
NOTCH3-203ENST00000595514 H0YGX0 51 aa5.73□□□□□ -1.49
NOTCH3-203ENST00000595514 M0R143 59 aa5.73□□□□□ -1.49
NOTCH3-203ENST00000595514 SLC25A20O43772 301 aa5.73□□□□□ -1.49
NOTCH3-203ENST00000595514 Q1RN00 199 aa5.73□□□□□ -1.49
NOTCH3-203ENST00000595514 SPAG11AQ6PDA7 123 aa5.73□□□□□ -1.49
NOTCH3-203ENST00000595514 MOBPQ13875 183 aa5.72□□□□□ -1.49
NOTCH3-203ENST00000595514 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.72□□□□□ -1.49
NOTCH3-203ENST00000595514 Q6ZQY7 126 aa5.72□□□□□ -1.49
NOTCH3-203ENST00000595514 SSBP3-AS1Q7Z2R9 100 aa5.72□□□□□ -1.49
NOTCH3-203ENST00000595514 Q8NBF4 154 aa5.72□□□□□ -1.49
NOTCH3-203ENST00000595514 IGLV9-49A0A0B4J1Y8 123 aa5.71□□□□□ -1.5
NOTCH3-203ENST00000595514 A0A1B0GX51 115 aa5.71□□□□□ -1.5
NOTCH3-203ENST00000595514 C4orf48Q5BLP8 95 aa5.71□□□□□ -1.5
NOTCH3-203ENST00000595514 DEFB105AQ8NG35 78 aa5.71□□□□□ -1.5
NOTCH3-203ENST00000595514 LAMTOR3Q9UHA4 124 aa5.7□□□□□ -1.5
NOTCH3-203ENST00000595514 PPDPFLQ8WWR9 84 aa5.69□□□□□ -1.5
NOTCH3-203ENST00000595514 C9orf153Q5TBE3 101 aa5.68□□□□□ -1.5
NOTCH3-203ENST00000595514 CLEC2BQ92478 149 aa5.68□□□□□ -1.5
NOTCH3-203ENST00000595514 RPS29P62273 56 aaKnown RBP5.67□□□□□ -1.5
NOTCH3-203ENST00000595514 OCIAD2Q56VL3 154 aa5.67□□□□□ -1.5
NOTCH3-203ENST00000595514 IGLV8-61A0A075B6I0 122 aa5.66□□□□□ -1.5
NOTCH3-203ENST00000595514 SPINK1P00995 79 aa5.66□□□□□ -1.5
NOTCH3-203ENST00000595514 PSMB2P49721 201 aa5.66□□□□□ -1.5
NOTCH3-203ENST00000595514 XP32Q5T750 250 aa5.66□□□□□ -1.5
NOTCH3-203ENST00000595514 FLGP20930 4061 aaPredicted RBP5.66□□□□□ -1.5
NOTCH3-203ENST00000595514 LST1O00453 97 aa5.65□□□□□ -1.5
NOTCH3-203ENST00000595514 COX6CP09669 75 aa5.65□□□□□ -1.5
NOTCH3-203ENST00000595514 SNCGO76070 127 aa5.63□□□□□ -1.51
NOTCH3-203ENST00000595514 TRACP01848 142 aa5.63□□□□□ -1.51
NOTCH3-203ENST00000595514 CD164Q04900 197 aa5.63□□□□□ -1.51
NOTCH3-203ENST00000595514 NAA38Q9BRA0 125 aaKnown RBP5.63□□□□□ -1.51
NOTCH3-203ENST00000595514 A0A0G2JQZ4 141 aa5.62□□□□□ -1.51
NOTCH3-203ENST00000595514 TAX1BP3O14907 124 aa5.62□□□□□ -1.51
NOTCH3-203ENST00000595514 BATFQ16520 125 aa5.62□□□□□ -1.51
NOTCH3-203ENST00000595514 SNHG12Q9BXW3 62 aa5.62□□□□□ -1.51
NOTCH3-203ENST00000595514 F8WEM9 126 aa5.6□□□□□ -1.51
NOTCH3-203ENST00000595514 TCL1BO95988 128 aa5.6□□□□□ -1.51
NOTCH3-203ENST00000595514 DNAL4O96015 105 aa5.6□□□□□ -1.51
NOTCH3-203ENST00000595514 GHRHP01286 108 aa5.6□□□□□ -1.51
NOTCH3-203ENST00000595514 SCGB1C2P0DMR2 95 aa5.6□□□□□ -1.51
NOTCH3-203ENST00000595514 NDUFV3P56181 108 aaKnown RBP5.6□□□□□ -1.51
NOTCH3-203ENST00000595514 PCOTHQ58A44 107 aa5.6□□□□□ -1.51
NOTCH3-203ENST00000595514 Q5XG85 94 aa5.6□□□□□ -1.51
NOTCH3-203ENST00000595514 Q6JHZ5 121 aa5.6□□□□□ -1.51
NOTCH3-203ENST00000595514 IGFL1Q6UW32 110 aa5.6□□□□□ -1.51
NOTCH3-203ENST00000595514 COX6B2Q6YFQ2 88 aa5.6□□□□□ -1.51
NOTCH3-203ENST00000595514 ORMDL1Q9P0S3 153 aa5.6□□□□□ -1.51
NOTCH3-203ENST00000595514 C9orf118A6NHY6 69 aa5.59□□□□□ -1.51
NOTCH3-203ENST00000595514 H3BQ85 93 aa5.59□□□□□ -1.51
NOTCH3-203ENST00000595514 H3BUT2 72 aa5.58□□□□□ -1.52
NOTCH3-203ENST00000595514 TMEM256-PLSCR3K7ERE1 68 aa5.58□□□□□ -1.52
NOTCH3-203ENST00000595514 HRCT1Q6UXD1 115 aa5.58□□□□□ -1.52
NOTCH3-203ENST00000595514 FABP2P12104 132 aa5.57□□□□□ -1.52
NOTCH3-203ENST00000595514 UBE2V1Q13404 147 aa5.57□□□□□ -1.52
NOTCH3-203ENST00000595514 ATXN8Q156A1 80 aa5.57□□□□□ -1.52
NOTCH3-203ENST00000595514 H3BMG7 143 aa5.56□□□□□ -1.52
NOTCH3-203ENST00000595514 LYRM7Q5U5X0 104 aa5.56□□□□□ -1.52
NOTCH3-203ENST00000595514 Q6Q795 121 aa5.56□□□□□ -1.52
NOTCH3-203ENST00000595514 KRTAP19-1Q8IUB9 90 aa5.56□□□□□ -1.52
NOTCH3-203ENST00000595514 LIMD2Q9BT23 127 aa5.56□□□□□ -1.52
NOTCH3-203ENST00000595514 TRBV20-1A0A075B6N2 111 aa5.55□□□□□ -1.52
NOTCH3-203ENST00000595514 TRBV7-7A0A0K0K1E9 115 aa5.55□□□□□ -1.52
NOTCH3-203ENST00000595514 A0A1W2PPM0 123 aa5.55□□□□□ -1.52
NOTCH3-203ENST00000595514 BAALC-AS2P0C853 105 aa5.53□□□□□ -1.52
NOTCH3-203ENST00000595514 COL5A1-AS1Q5SY13 56 aa5.53□□□□□ -1.52
NOTCH3-203ENST00000595514 NEBP20929 6669 aa5.53□□□□□ -1.52
NOTCH3-203ENST00000595514 TRBV7-4A0A0J9YYF1 115 aa5.52□□□□□ -1.53
NOTCH3-203ENST00000595514 A0A1W2PNM2 257 aa5.52□□□□□ -1.53
NOTCH3-203ENST00000595514 PCP4L1A6NKN8 68 aa5.52□□□□□ -1.53
NOTCH3-203ENST00000595514 TEN1Q86WV5 123 aa5.52□□□□□ -1.53
NOTCH3-203ENST00000595514 C1orf195Q5TG92 126 aa5.51□□□□□ -1.53
NOTCH3-203ENST00000595514 ANKRD29Q8N6D5 301 aa5.51□□□□□ -1.53
NOTCH3-203ENST00000595514 A0A1B0GV72 72 aa5.49□□□□□ -1.53
NOTCH3-203ENST00000595514 C9JAW5 83 aa5.49□□□□□ -1.53
NOTCH3-203ENST00000595514 C9orf92A6NGG3 77 aa5.48□□□□□ -1.53
NOTCH3-203ENST00000595514 RBM3P98179 157 aaKnown RBP5.48□□□□□ -1.53
NOTCH3-203ENST00000595514 OBSCN-AS1Q96MR7 158 aa5.48□□□□□ -1.53
NOTCH3-203ENST00000595514 SPCS1Q9Y6A9 102 aa5.48□□□□□ -1.53
NOTCH3-203ENST00000595514 H3BT86 120 aa5.47□□□□□ -1.53
NOTCH3-203ENST00000595514 A0A087WSZ3 146 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms