RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 H7C2G1 150 aa10.22□□□□□ -0.77
SHKBP1-202ENST00000593764 ASB16-AS1Q495Z4 193 aa10.21□□□□□ -0.77
SHKBP1-202ENST00000593764 BVES-AS1Q5T3Y7 98 aa10.2□□□□□ -0.78
SHKBP1-202ENST00000593764 Q5XG85 94 aa10.2□□□□□ -0.78
SHKBP1-202ENST00000593764 FAT4Q6V0I7 4981 aa10.2□□□□□ -0.78
SHKBP1-202ENST00000593764 A0A0U1RQV1 116 aa10.19□□□□□ -0.78
SHKBP1-202ENST00000593764 PYY3Q5JQD4 70 aa10.18□□□□□ -0.78
SHKBP1-202ENST00000593764 XP32Q5T750 250 aa10.18□□□□□ -0.78
SHKBP1-202ENST00000593764 A0A0B4J2C4 111 aa10.17□□□□□ -0.78
SHKBP1-202ENST00000593764 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.17□□□□□ -0.78
SHKBP1-202ENST00000593764 RAB37Q96AX2 223 aa10.17□□□□□ -0.78
SHKBP1-202ENST00000593764 CEND1Q8N111 149 aa10.16□□□□□ -0.78
SHKBP1-202ENST00000593764 IGLV8-61A0A075B6I0 122 aa10.15□□□□□ -0.78
SHKBP1-202ENST00000593764 F8WEM9 126 aa10.14□□□□□ -0.79
SHKBP1-202ENST00000593764 SEC61BP60468 96 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-202ENST00000593764 C1orf195Q5TG92 126 aa10.14□□□□□ -0.79
SHKBP1-202ENST00000593764 KRTAP4-1Q9BYQ7 146 aa10.14□□□□□ -0.79
SHKBP1-202ENST00000593764 FXYD2P54710 66 aa10.11□□□□□ -0.79
SHKBP1-202ENST00000593764 OCIAD2Q56VL3 154 aa10.11□□□□□ -0.79
SHKBP1-202ENST00000593764 PPDPFLQ8WWR9 84 aa10.11□□□□□ -0.79
SHKBP1-202ENST00000593764 H0YGX0 51 aa10.1□□□□□ -0.79
SHKBP1-202ENST00000593764 LCE2AQ5TA79 106 aaPredicted RBP10.1□□□□□ -0.79
SHKBP1-202ENST00000593764 Q6JHZ5 121 aa10.1□□□□□ -0.79
SHKBP1-202ENST00000593764 IGFL1Q6UW32 110 aa10.1□□□□□ -0.79
SHKBP1-202ENST00000593764 FAM218AQ96MZ4 157 aa10.1□□□□□ -0.79
SHKBP1-202ENST00000593764 C9orf92A6NGG3 77 aa10.09□□□□□ -0.79
SHKBP1-202ENST00000593764 PRO1854Q9UHT4 67 aa10.09□□□□□ -0.79
SHKBP1-202ENST00000593764 TMEM238LA0A1B0GVL6 79 aa10.08□□□□□ -0.8
SHKBP1-202ENST00000593764 CLEC2BQ92478 149 aa10.08□□□□□ -0.8
SHKBP1-202ENST00000593764 SNHG12Q9BXW3 62 aa10.07□□□□□ -0.8
SHKBP1-202ENST00000593764 TCL1BO95988 128 aa10.06□□□□□ -0.8
SHKBP1-202ENST00000593764 TRBV7-7A0A0K0K1E9 115 aa10.04□□□□□ -0.8
SHKBP1-202ENST00000593764 H3BUT2 72 aa10.03□□□□□ -0.8
SHKBP1-202ENST00000593764 SNCGO76070 127 aa10.03□□□□□ -0.8
SHKBP1-202ENST00000593764 HSD52Q0P140 79 aa10.03□□□□□ -0.8
SHKBP1-202ENST00000593764 A0A1B0GX51 115 aa10.01□□□□□ -0.81
SHKBP1-202ENST00000593764 TRIAP1O43715 76 aa10.01□□□□□ -0.81
SHKBP1-202ENST00000593764 NDUFV3P56181 108 aaKnown RBP9.99□□□□□ -0.81
SHKBP1-202ENST00000593764 K7ERJ3 54 aa9.98□□□□□ -0.81
SHKBP1-202ENST00000593764 PCOTHQ58A44 107 aa9.98□□□□□ -0.81
SHKBP1-202ENST00000593764 UQCR10Q9UDW1 63 aa9.98□□□□□ -0.81
SHKBP1-202ENST00000593764 Q6Q795 121 aa9.95□□□□□ -0.82
SHKBP1-202ENST00000593764 H3BMG7 143 aa9.92□□□□□ -0.82
SHKBP1-202ENST00000593764 FABP2P12104 132 aa9.92□□□□□ -0.82
SHKBP1-202ENST00000593764 GHRHP01286 108 aa9.91□□□□□ -0.82
SHKBP1-202ENST00000593764 PSMB2P49721 201 aa9.91□□□□□ -0.82
SHKBP1-202ENST00000593764 TEN1Q86WV5 123 aa9.91□□□□□ -0.82
SHKBP1-202ENST00000593764 RPL37P61927 97 aaKnown RBP9.9□□□□□ -0.82
SHKBP1-202ENST00000593764 LST1O00453 97 aa9.89□□□□□ -0.83
SHKBP1-202ENST00000593764 COX6CP09669 75 aa9.87□□□□□ -0.83
SHKBP1-202ENST00000593764 KRTAP19-2Q3LHN2 52 aa9.87□□□□□ -0.83
SHKBP1-202ENST00000593764 DNAL4O96015 105 aa9.86□□□□□ -0.83
SHKBP1-202ENST00000593764 LCE2CQ5TA81 110 aa9.86□□□□□ -0.83
SHKBP1-202ENST00000593764 ORMDL1Q9P0S3 153 aa9.86□□□□□ -0.83
SHKBP1-202ENST00000593764 A0A1W2PNM2 257 aa9.85□□□□□ -0.83
SHKBP1-202ENST00000593764 SS18L2Q9UHA2 77 aa9.85□□□□□ -0.83
SHKBP1-202ENST00000593764 A0A087WSZ3 146 aa9.84□□□□□ -0.83
SHKBP1-202ENST00000593764 H3BQ85 93 aa9.83□□□□□ -0.84
SHKBP1-202ENST00000593764 OBSCN-AS1Q96MR7 158 aa9.83□□□□□ -0.84
SHKBP1-202ENST00000593764 TMEM256-PLSCR3K7ERE1 68 aa9.82□□□□□ -0.84
SHKBP1-202ENST00000593764 Q96NJ1 140 aa9.82□□□□□ -0.84
SHKBP1-202ENST00000593764 ANKRD29Q8N6D5 301 aa9.79□□□□□ -0.84
SHKBP1-202ENST00000593764 A0A1B0GV72 72 aa9.78□□□□□ -0.84
SHKBP1-202ENST00000593764 TRACP01848 142 aa9.78□□□□□ -0.84
SHKBP1-202ENST00000593764 SCGB1C2P0DMR2 95 aa9.77□□□□□ -0.85
SHKBP1-202ENST00000593764 UBE2V1Q13404 147 aa9.77□□□□□ -0.85
SHKBP1-202ENST00000593764 Q75L30 129 aa9.77□□□□□ -0.85
SHKBP1-202ENST00000593764 TRBV7-4A0A0J9YYF1 115 aa9.76□□□□□ -0.85
SHKBP1-202ENST00000593764 KRTAP9-2Q9BYQ4 174 aa9.76□□□□□ -0.85
SHKBP1-202ENST00000593764 SMIM6P0DI80 62 aa9.73□□□□□ -0.85
SHKBP1-202ENST00000593764 M0R143 59 aa9.7□□□□□ -0.86
SHKBP1-202ENST00000593764 CCKP06307 115 aa9.7□□□□□ -0.86
SHKBP1-202ENST00000593764 MT1HP80294 61 aa9.7□□□□□ -0.86
SHKBP1-202ENST00000593764 ATP11AUNQ6ZP68 121 aa9.69□□□□□ -0.86
SHKBP1-202ENST00000593764 C20orf166-AS1Q96NR2 134 aa9.69□□□□□ -0.86
SHKBP1-202ENST00000593764 BAALC-AS2P0C853 105 aa9.68□□□□□ -0.86
SHKBP1-202ENST00000593764 A8MUU9 505 aa9.67□□□□□ -0.86
SHKBP1-202ENST00000593764 NAA38Q9BRA0 125 aaKnown RBP9.67□□□□□ -0.86
SHKBP1-202ENST00000593764 RBM3P98179 157 aaKnown RBP9.66□□□□□ -0.86
SHKBP1-202ENST00000593764 SIGMAR1Q99720 223 aa9.66□□□□□ -0.86
SHKBP1-202ENST00000593764 LINC00472Q9H8W2 130 aa9.66□□□□□ -0.86
SHKBP1-202ENST00000593764 IGKV4-1P06312 121 aa9.65□□□□□ -0.86
SHKBP1-202ENST00000593764 DSCR10P59022 87 aa9.65□□□□□ -0.86
SHKBP1-202ENST00000593764 DEFB116Q30KQ4 102 aa9.64□□□□□ -0.87
SHKBP1-202ENST00000593764 FLGP20930 4061 aaPredicted RBP9.63□□□□□ -0.87
SHKBP1-202ENST00000593764 SMCPP49901 116 aaPredicted RBP9.63□□□□□ -0.87
SHKBP1-202ENST00000593764 DSCR8Q96T75 97 aa9.62□□□□□ -0.87
SHKBP1-202ENST00000593764 ATXN8Q156A1 80 aa9.61□□□□□ -0.87
SHKBP1-202ENST00000593764 VPS25Q9BRG1 176 aa9.61□□□□□ -0.87
SHKBP1-202ENST00000593764 LOC105371267A0A1B0GV96 52 aa9.6□□□□□ -0.87
SHKBP1-202ENST00000593764 LINC00313P59037 77 aa9.6□□□□□ -0.87
SHKBP1-202ENST00000593764 NOTCH2NLQ7Z3S9 236 aa9.6□□□□□ -0.87
SHKBP1-202ENST00000593764 KRTAP16-1A8MUX0 517 aa9.59□□□□□ -0.87
SHKBP1-202ENST00000593764 C9JAW5 83 aa9.58□□□□□ -0.88
SHKBP1-202ENST00000593764 TSTD3H0UI37 97 aa9.58□□□□□ -0.88
SHKBP1-202ENST00000593764 C21orf62-AS1Q17RA5 79 aa9.57□□□□□ -0.88
SHKBP1-202ENST00000593764 COX6B2Q6YFQ2 88 aa9.57□□□□□ -0.88
SHKBP1-202ENST00000593764 BATFQ16520 125 aa9.53□□□□□ -0.88
SHKBP1-202ENST00000593764 Q6ZQT0 140 aa9.53□□□□□ -0.88
SHKBP1-202ENST00000593764 IGHV6-1A0A0B4J1U7 121 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms