RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 PSENENQ9NZ42 101 aa3.45□□□□□ -1.86
VMP1-215ENST00000592619 UBE2D4Q9Y2X8 147 aa3.45□□□□□ -1.86
VMP1-215ENST00000592619 PRKDCP78527 4128 aaKnown RBP3.45□□□□□ -1.86
VMP1-215ENST00000592619 NBEAL1Q6ZS30 2694 aa3.44□□□□□ -1.86
VMP1-215ENST00000592619 A0A0J9YX75 114 aa3.44□□□□□ -1.86
VMP1-215ENST00000592619 NDUFA4O00483 81 aa3.44□□□□□ -1.86
VMP1-215ENST00000592619 KRTAP25-1Q3LHN0 102 aa3.44□□□□□ -1.86
VMP1-215ENST00000592619 C1orf137Q5JT78 98 aa3.44□□□□□ -1.86
VMP1-215ENST00000592619 SFTA2Q6UW10 78 aa3.44□□□□□ -1.86
VMP1-215ENST00000592619 DNAH9Q9NYC9 4486 aa3.44□□□□□ -1.86
VMP1-215ENST00000592619 CTSGP08311 255 aa3.43□□□□□ -1.86
VMP1-215ENST00000592619 ELOF1P60002 83 aaKnown RBP3.43□□□□□ -1.86
VMP1-215ENST00000592619 PRR9Q5T870 116 aa3.43□□□□□ -1.86
VMP1-215ENST00000592619 C9orf163Q8N9P6 203 aa3.43□□□□□ -1.86
VMP1-215ENST00000592619 PSCAO43653 123 aa3.42□□□□□ -1.86
VMP1-215ENST00000592619 IAPPP10997 89 aa3.42□□□□□ -1.86
VMP1-215ENST00000592619 DMAC1Q96GE9 116 aa3.42□□□□□ -1.86
VMP1-215ENST00000592619 NMES1Q9C002 83 aa3.42□□□□□ -1.86
VMP1-215ENST00000592619 MGAM2Q2M2H8 2515 aa3.42□□□□□ -1.86
VMP1-215ENST00000592619 HIGD1CA8MV81 97 aa3.41□□□□□ -1.86
VMP1-215ENST00000592619 IGKV1-17P01599 117 aa3.41□□□□□ -1.86
VMP1-215ENST00000592619 CNBPP62633 177 aaKnown RBP3.41□□□□□ -1.86
VMP1-215ENST00000592619 DEFB114Q30KQ6 69 aa3.41□□□□□ -1.86
VMP1-215ENST00000592619 CSAG1Q6PB30 78 aa3.41□□□□□ -1.86
VMP1-215ENST00000592619 Q86TA4 180 aa3.41□□□□□ -1.86
VMP1-215ENST00000592619 MRPL36Q9P0J6 103 aaKnown RBP3.41□□□□□ -1.86
VMP1-215ENST00000592619 GNG13Q9P2W3 67 aa3.41□□□□□ -1.86
VMP1-215ENST00000592619 PSORS1C2Q9UIG4 136 aa3.41□□□□□ -1.86
VMP1-215ENST00000592619 LENEPQ9Y5L5 61 aa3.41□□□□□ -1.86
VMP1-215ENST00000592619 WNK1Q9H4A3 2382 aa3.4□□□□□ -1.86
VMP1-215ENST00000592619 TMSB15BA0A087X1C1 80 aa3.4□□□□□ -1.87
VMP1-215ENST00000592619 K7EIL1 84 aa3.4□□□□□ -1.87
VMP1-215ENST00000592619 PDE6HQ13956 83 aa3.4□□□□□ -1.87
VMP1-215ENST00000592619 HUWE1Q7Z6Z7 4374 aaKnown RBP3.4□□□□□ -1.87
VMP1-215ENST00000592619 H3BVH4 76 aa3.39□□□□□ -1.87
VMP1-215ENST00000592619 ARMS2P0C7Q2 107 aa3.39□□□□□ -1.87
VMP1-215ENST00000592619 ATXN8Q156A1 80 aa3.39□□□□□ -1.87
VMP1-215ENST00000592619 LYPD1Q8N2G4 141 aa3.39□□□□□ -1.87
VMP1-215ENST00000592619 PPP1R1CQ8WVI7 109 aa3.39□□□□□ -1.87
VMP1-215ENST00000592619 HIGD2AQ9BW72 106 aa3.39□□□□□ -1.87
VMP1-215ENST00000592619 RHPN1-AS1Q9BWJ2 59 aa3.39□□□□□ -1.87
VMP1-215ENST00000592619 A0A0J9YY99 117 aa3.38□□□□□ -1.87
VMP1-215ENST00000592619 NUPR2A6NF83 97 aa3.38□□□□□ -1.87
VMP1-215ENST00000592619 AMELXQ99217 191 aa3.38□□□□□ -1.87
VMP1-215ENST00000592619 Q9BRP9 147 aa3.38□□□□□ -1.87
VMP1-215ENST00000592619 NOTCH1P46531 2555 aa3.38□□□□□ -1.87
VMP1-215ENST00000592619 LEPROTL1O95214 131 aa3.37□□□□□ -1.87
VMP1-215ENST00000592619 D6R8Y8 96 aa3.36□□□□□ -1.87
VMP1-215ENST00000592619 MUSTN1Q8IVN3 82 aa3.36□□□□□ -1.87
VMP1-215ENST00000592619 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
VMP1-215ENST00000592619 COL7A1Q02388 2944 aa3.35□□□□□ -1.87
VMP1-215ENST00000592619 H3BRN7 92 aa3.35□□□□□ -1.87
VMP1-215ENST00000592619 IGHV3-30P01768 117 aa3.35□□□□□ -1.87
VMP1-215ENST00000592619 IGHV3-30-5P0DP03 117 aa3.35□□□□□ -1.87
VMP1-215ENST00000592619 LINC00322Q6ZN03 302 aaPredicted RBP3.35□□□□□ -1.87
VMP1-215ENST00000592619 ORMDL1Q9P0S3 153 aa3.35□□□□□ -1.87
VMP1-215ENST00000592619 DNAH7Q8WXX0 4024 aa3.34□□□□□ -1.87
VMP1-215ENST00000592619 IGKV3-7A0A075B6H7 116 aa3.34□□□□□ -1.87
VMP1-215ENST00000592619 C10orf113Q5VZT2 155 aa3.34□□□□□ -1.87
VMP1-215ENST00000592619 WFDC10AQ9H1F0 79 aa3.34□□□□□ -1.87
VMP1-215ENST00000592619 SORL1Q92673 2214 aa3.34□□□□□ -1.88
VMP1-215ENST00000592619 TRBV7-4A0A0J9YYF1 115 aa3.33□□□□□ -1.88
VMP1-215ENST00000592619 DEFB131AP59861 70 aa3.33□□□□□ -1.88
VMP1-215ENST00000592619 SPAG11BQ08648 103 aa3.33□□□□□ -1.88
VMP1-215ENST00000592619 SPAG11AQ6PDA7 123 aa3.33□□□□□ -1.88
VMP1-215ENST00000592619 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.33□□□□□ -1.88
VMP1-215ENST00000592619 Q6ZTI0 123 aa3.33□□□□□ -1.88
VMP1-215ENST00000592619 TMEM14CQ9P0S9 112 aa3.33□□□□□ -1.88
VMP1-215ENST00000592619 STARD9Q9P2P6 4700 aa3.33□□□□□ -1.88
VMP1-215ENST00000592619 PPP1R17O96001 155 aa3.32□□□□□ -1.88
VMP1-215ENST00000592619 SERF2P84101 59 aa3.32□□□□□ -1.88
VMP1-215ENST00000592619 FAM74A4Q5TZK3 123 aa3.32□□□□□ -1.88
VMP1-215ENST00000592619 R4GN34 69 aa3.32□□□□□ -1.88
VMP1-215ENST00000592619 A8MTW9 85 aa3.31□□□□□ -1.88
VMP1-215ENST00000592619 GDF5OSQ5U4N7 250 aa3.31□□□□□ -1.88
VMP1-215ENST00000592619 PLECQ15149 4684 aaKnown RBP3.31□□□□□ -1.88
VMP1-215ENST00000592619 TGP01266 2768 aa3.3□□□□□ -1.88
VMP1-215ENST00000592619 DYNC2H1Q8NCM8 4307 aaKnown RBP3.3□□□□□ -1.88
VMP1-215ENST00000592619 KMT2CQ8NEZ4 4911 aaKnown RBP3.3□□□□□ -1.88
VMP1-215ENST00000592619 TRBV6-5A0A0K0K1A5 114 aa3.3□□□□□ -1.88
VMP1-215ENST00000592619 KRTAP10-8P60410 259 aa3.3□□□□□ -1.88
VMP1-215ENST00000592619 DEFB135Q30KP9 77 aa3.3□□□□□ -1.88
VMP1-215ENST00000592619 PRR15LQ9BU68 103 aa3.3□□□□□ -1.88
VMP1-215ENST00000592619 LINC01549A6NIU2 74 aa3.29□□□□□ -1.88
VMP1-215ENST00000592619 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
VMP1-215ENST00000592619 TMEM167BQ9NRX6 74 aa3.29□□□□□ -1.88
VMP1-215ENST00000592619 SACSQ9NZJ4 4579 aa3.29□□□□□ -1.88
VMP1-215ENST00000592619 CSMD3Q7Z407 3707 aa3.28□□□□□ -1.88
VMP1-215ENST00000592619 TRBV30A0A0K0K1B3 111 aa3.28□□□□□ -1.88
VMP1-215ENST00000592619 CTXND1A0A1B0GTU2 59 aa3.28□□□□□ -1.88
VMP1-215ENST00000592619 DEFB1P60022 68 aa3.28□□□□□ -1.88
VMP1-215ENST00000592619 PLAC8Q9NZF1 115 aa3.28□□□□□ -1.88
VMP1-215ENST00000592619 SNURFQ9Y675 71 aa3.28□□□□□ -1.88
VMP1-215ENST00000592619 LINC01558Q9Y6Z2 57 aa3.28□□□□□ -1.88
VMP1-215ENST00000592619 RYR3Q15413 4870 aa3.28□□□□□ -1.88
VMP1-215ENST00000592619 RYR2Q92736 4967 aa3.28□□□□□ -1.89
VMP1-215ENST00000592619 F8VRH5 84 aa3.27□□□□□ -1.89
VMP1-215ENST00000592619 M0R3E3 92 aa3.27□□□□□ -1.89
VMP1-215ENST00000592619 ARL14EPLP0DKL9 152 aa3.27□□□□□ -1.89
VMP1-215ENST00000592619 PDE6GP18545 87 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms